RNA–Protein interactions for RNA: ENST00000557782.1

TDP1-217, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 318 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-217ENST00000557782 PCDHB14Q9Y5E9 798 aa5.03□□□□□ -1.6
TDP1-217ENST00000557782 A0A1W2PQH9 124 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 METTL12A8MUP2 240 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 PDE8AO60658 829 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 RFPL3O75679 317 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 ATE1O95260 518 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 FAM153BP0C7A2 387 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 GUCY2CP25092 1073 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 RPL6Q02878 288 aaKnown RBP5.02□□□□□ -1.61
TDP1-217ENST00000557782 FAAP100Q0VG06 881 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 PABPC4Q13310 644 aaKnown RBP eCLIP5.02□□□□□ -1.61
TDP1-217ENST00000557782 HDAC1Q13547 482 aaPredicted RBP5.02□□□□□ -1.61
TDP1-217ENST00000557782 UBE4AQ14139 1066 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 NCAPHQ15003 741 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 NFE2Q16621 373 aaPredicted RBP5.02□□□□□ -1.61
TDP1-217ENST00000557782 AXDND1Q5T1B0 1012 aaPredicted RBP5.02□□□□□ -1.61
TDP1-217ENST00000557782 LLGL2Q6P1M3 1020 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 TTC6Q86TZ1 520 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 LINC00528Q8N1L1 170 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 CEP120Q8N960 986 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 ATL2Q8NHH9 583 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 RNF217Q8TC41 542 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 TSR2Q969E8 191 aaKnown RBP5.02□□□□□ -1.61
TDP1-217ENST00000557782 EMILIN2Q9BXX0 1053 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 GSX2Q9BZM3 304 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 ZCCHC2Q9C0B9 1178 aaKnown RBP5.02□□□□□ -1.61
TDP1-217ENST00000557782 EPN3Q9H201 632 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 CBX8Q9HC52 389 aa5.02□□□□□ -1.61
TDP1-217ENST00000557782 TLR7Q9NYK1 1049 aaKnown RBP5.02□□□□□ -1.61
TDP1-217ENST00000557782 TTC24A2A3L6 582 aaPredicted RBP5.01□□□□□ -1.61
TDP1-217ENST00000557782 TSPAN6O43657 245 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 TRPA1O75762 1119 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 RASGRP1O95267 797 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 KRT18P05783 430 aaKnown RBP5.01□□□□□ -1.61
TDP1-217ENST00000557782 HOXD8P13378 290 aaPredicted RBP5.01□□□□□ -1.61
TDP1-217ENST00000557782 NFKB1P19838 968 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 POU3F3P20264 500 aaPredicted RBP5.01□□□□□ -1.61
TDP1-217ENST00000557782 BMP6P22004 513 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 GNALP38405 381 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 ZNF157P51786 506 aaPredicted RBP5.01□□□□□ -1.61
TDP1-217ENST00000557782 FOXC1Q12948 553 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 MLECQ14165 292 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 HLTFQ14527 1009 aaKnown RBP eCLIP5.01□□□□□ -1.61
TDP1-217ENST00000557782 EFHC2Q5JST6 749 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 MRM1Q6IN84 353 aaKnown RBP5.01□□□□□ -1.61
TDP1-217ENST00000557782 RUFY4Q6ZNE9 571 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 TSHZ1Q6ZSZ6 1077 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 ZBTB38Q8NAP3 1195 aaPredicted RBP5.01□□□□□ -1.61
TDP1-217ENST00000557782 ZSCAN1Q8NBB4 408 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 NXPE3Q969Y0 559 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 FAM126AQ9BYI3 521 aaPredicted RBP5.01□□□□□ -1.61
TDP1-217ENST00000557782 UBA5Q9GZZ9 404 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 RUBCNLQ9H714 662 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 GPAMQ9HCL2 828 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 MAPRE3Q9UPY8 281 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 COMMD10Q9Y6G5 202 aa5.01□□□□□ -1.61
TDP1-217ENST00000557782 WASHC2CQ9Y4E1 1318 aa5□□□□□ -1.61
TDP1-217ENST00000557782 A0A087X0B3 334 aa5□□□□□ -1.61
TDP1-217ENST00000557782 MEIS3P2A8K0S8 358 aa5□□□□□ -1.61
TDP1-217ENST00000557782 AGRPO00253 132 aa5□□□□□ -1.61
TDP1-217ENST00000557782 PDE2AO00408 941 aaPredicted RBP5□□□□□ -1.61
TDP1-217ENST00000557782 FAM157BP0CG42 384 aa5□□□□□ -1.61
TDP1-217ENST00000557782 RHOQP17081 205 aa5□□□□□ -1.61
TDP1-217ENST00000557782 GUCY2FP51841 1108 aa5□□□□□ -1.61
TDP1-217ENST00000557782 FNDC3BQ53EP0 1204 aaKnown RBP5□□□□□ -1.61
TDP1-217ENST00000557782 COL13A1Q5TAT6 717 aaPredicted RBP5□□□□□ -1.61
TDP1-217ENST00000557782 ZNF697Q5TEC3 545 aa5□□□□□ -1.61
TDP1-217ENST00000557782 SPRYD7Q5W111 196 aa5□□□□□ -1.61
TDP1-217ENST00000557782 SCARA3Q6AZY7 606 aa5□□□□□ -1.61
TDP1-217ENST00000557782 KANK3Q6NY19 840 aa5□□□□□ -1.61
TDP1-217ENST00000557782 FIGNL1Q6PIW4 674 aa5□□□□□ -1.61
TDP1-217ENST00000557782 VHLLQ6RSH7 139 aa5□□□□□ -1.61
TDP1-217ENST00000557782 RNF180Q86T96 592 aa5□□□□□ -1.61
TDP1-217ENST00000557782 SULF2Q8IWU5 870 aa5□□□□□ -1.61
TDP1-217ENST00000557782 RAVER1Q8IY67 606 aaKnown RBP5□□□□□ -1.61
TDP1-217ENST00000557782 TAB3Q8N5C8 712 aaPredicted RBP5□□□□□ -1.61
TDP1-217ENST00000557782 IPO9Q96P70 1041 aaKnown RBP5□□□□□ -1.61
TDP1-217ENST00000557782 KIF2CQ99661 725 aa5□□□□□ -1.61
TDP1-217ENST00000557782 RUSC1Q9BVN2 902 aa5□□□□□ -1.61
TDP1-217ENST00000557782 KRTAP3-3Q9BYR6 98 aa5□□□□□ -1.61
TDP1-217ENST00000557782 KRTAP3-2Q9BYR7 98 aa5□□□□□ -1.61
TDP1-217ENST00000557782 CLEC4MQ9H2X3 399 aaPredicted RBP5□□□□□ -1.61
TDP1-217ENST00000557782 PHAXQ9H814 394 aaKnown RBP5□□□□□ -1.61
TDP1-217ENST00000557782 ZFATQ9P243 1243 aa5□□□□□ -1.61
TDP1-217ENST00000557782 UPK3BL1B0FP48 263 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 UPK3BL2E5RIL1 263 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 NFKBIEO00221 500 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 PLD2O14939 933 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 SUSD5O60279 629 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 GRIN3BO60391 1043 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 MAP3K6O95382 1288 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 MYL1P05976 194 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 BMP2P12643 396 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 NRLP54845 237 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 SFSWAPQ12872 951 aaKnown RBP4.99□□□□□ -1.61
TDP1-217ENST00000557782 LAMC2Q13753 1193 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 SAFB2Q14151 953 aaKnown RBP eCLIP4.99□□□□□ -1.61
TDP1-217ENST00000557782 BRD3Q15059 726 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 MAP9Q49MG5 647 aa4.99□□□□□ -1.61
TDP1-217ENST00000557782 AKAP4Q5JQC9 854 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms