RNA–Protein interactions for RNA: ENST00000557566.1

SPTLC2-206, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 2

Gene SPTLC2, Length 510 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-206ENST00000557566 ANKIB1Q9P2G1 1089 aa8.89□□□□□ -0.99
SPTLC2-206ENST00000557566 EYSQ5T1H1 3165 aa8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 CCER2I3L3R5 266 aa8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 PPP1R12BO60237 982 aaPredicted RBP8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 MS4A1P11836 297 aa8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 DNAJB2P25686 324 aa8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 SLC4A3P48751 1232 aa8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 EIF4A1P60842 406 aaKnown RBP8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 SF3B3Q15393 1217 aaKnown RBP8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 MAP3K11Q16584 847 aa8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 ERICH6Q7L0X2 663 aa8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 PODNQ7Z5L7 613 aa8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 GGA1Q9UJY5 639 aa8.88□□□□□ -0.99
SPTLC2-206ENST00000557566 MYO3BQ8WXR4 1341 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 RCCD1A6NED2 376 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 SASH1O94885 1247 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 GNRH1P01148 92 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 MMP14P50281 582 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 RPS8P62241 208 aaKnown RBP8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 KIF22Q14807 665 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 Q7L0L9 218 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 UBE2Q1Q7Z7E8 422 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 CLMNQ96JQ2 1002 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 PTPN18Q99952 460 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 THUMPD2Q9BTF0 503 aaKnown RBP8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 ZFYVE28Q9HCC9 887 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 FZD1Q9UP38 647 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 COL4A1P02462 1669 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 LAMA2P24043 3122 aaKnown RBP8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 ZSWIM8A7E2V4 1837 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 ECM29Q5VYK3 1845 aa8.87□□□□□ -0.99
SPTLC2-206ENST00000557566 DLG5Q8TDM6 1919 aa8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 PRUNE2Q8WUY3 3088 aa8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 WDHD1O75717 1129 aaPredicted RBP8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 GJA8P48165 433 aa8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 BCAMP50895 628 aa8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 PRMT2P55345 433 aa8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 EIF4G2P78344 907 aaKnown RBP eCLIP8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 TAF1CQ15572 869 aaPredicted RBP8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 CC2D1BQ5T0F9 858 aaKnown RBP8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 SWT1Q5T5J6 900 aaKnown RBP8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 LRP10Q7Z4F1 713 aa8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 FAM217BQ9NTX9 383 aaPredicted RBP8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 MTMR10Q9NXD2 777 aa8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 STAP2Q9UGK3 403 aa8.86□□□□□ -0.99
SPTLC2-206ENST00000557566 OTOFQ9HC10 1997 aa8.85□□□□□ -0.99
SPTLC2-206ENST00000557566 FARP2O94887 1054 aaPredicted RBP8.85□□□□□ -0.99
SPTLC2-206ENST00000557566 GJB1P08034 283 aa8.85□□□□□ -0.99
SPTLC2-206ENST00000557566 SSTR3P32745 418 aaPredicted RBP8.85□□□□□ -0.99
SPTLC2-206ENST00000557566 IREB2P48200 963 aaKnown RBP8.85□□□□□ -0.99
SPTLC2-206ENST00000557566 MTFR1Q15390 333 aa8.85□□□□□ -0.99
SPTLC2-206ENST00000557566 NUDCQ9Y266 331 aa8.85□□□□□ -0.99
SPTLC2-206ENST00000557566 MUC3AQ02505 3323 aa8.85□□□□□ -0.99
SPTLC2-206ENST00000557566 TTC28Q96AY4 2481 aa8.85□□□□□ -0.99
SPTLC2-206ENST00000557566 SSC5DA1L4H1 1573 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 HSPA5P11021 654 aaKnown RBP8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 BMP8BP34820 402 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 GJA5P36382 358 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 LRIT3Q3SXY7 679 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 SUPT20HL1Q3ZLR7 823 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 DACT2Q5SW24 774 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 COPS6Q7L5N1 327 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 ANKRD13AQ8IZ07 590 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 CFAP53Q96M91 514 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 DEFB129Q9H1M3 183 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 PPP2R3BQ9Y5P8 575 aa8.84□□□□□ -0.99
SPTLC2-206ENST00000557566 XDHP47989 1333 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 ANXA1P04083 346 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 U2AF1L5P0DN76 240 aaPredicted RBP8.83□□□□□ -1
SPTLC2-206ENST00000557566 CCL5P13501 91 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 EIF2S2P20042 333 aaKnown RBP8.83□□□□□ -1
SPTLC2-206ENST00000557566 LACTBP83111 547 aaPredicted RBP8.83□□□□□ -1
SPTLC2-206ENST00000557566 U2AF1Q01081 240 aaKnown RBP eCLIP8.83□□□□□ -1
SPTLC2-206ENST00000557566 AIMP1Q12904 312 aaKnown RBP8.83□□□□□ -1
SPTLC2-206ENST00000557566 PROSER3Q2NL68 480 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 STRIP1Q5VSL9 837 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 XAGE3Q8WTP9 111 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 ZNF428Q96B54 188 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 FAM89AQ96GI7 184 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 MXD3Q9BW11 206 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 ARHGAP39Q9C0H5 1083 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 RNF208Q9H0X6 261 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 ALPK3Q96L96 1907 aa8.83□□□□□ -1
SPTLC2-206ENST00000557566 RPTORQ8N122 1335 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 CCL15-CCL14A0A0B4J2E2 113 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 ATP2B4P23634 1241 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 GRK4P32298 578 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 GTF2A2P52657 109 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 UBXN2AP68543 259 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 CCL15Q16663 113 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 ERICH6BQ5W0A0 696 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 SLF2Q8IX21 1173 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 BRI3BPQ8WY22 251 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 OPTNQ96CV9 577 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 ZBED3Q96IU2 234 aaPredicted RBP8.82□□□□□ -1
SPTLC2-206ENST00000557566 GDF15Q99988 308 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 TMEM134Q9H6X4 195 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 MED23Q9ULK4 1368 aa8.82□□□□□ -1
SPTLC2-206ENST00000557566 SOWAHBA6NEL2 793 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms