RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.17□□□□□ -1.1
VRK1-207ENST00000557352 PNMA6FA0A0J9YX94 578 aa8.17□□□□□ -1.1
VRK1-207ENST00000557352 RAB6AP20340 208 aa8.17□□□□□ -1.1
VRK1-207ENST00000557352 ASPAP45381 313 aa8.17□□□□□ -1.1
VRK1-207ENST00000557352 ENOX2Q16206 610 aaKnown RBP8.17□□□□□ -1.1
VRK1-207ENST00000557352 ZAR1Q86SH2 424 aa8.17□□□□□ -1.1
VRK1-207ENST00000557352 TBC1D32Q96NH3 1257 aa8.17□□□□□ -1.1
VRK1-207ENST00000557352 SEMA6CQ9H3T2 930 aa8.17□□□□□ -1.1
VRK1-207ENST00000557352 ACSS3Q9H6R3 686 aa8.17□□□□□ -1.1
VRK1-207ENST00000557352 PPP4R2Q9NY27 417 aa8.17□□□□□ -1.1
VRK1-207ENST00000557352 LEMD3Q9Y2U8 911 aa8.17□□□□□ -1.1
VRK1-207ENST00000557352 WNT11O96014 354 aa8.16□□□□□ -1.1
VRK1-207ENST00000557352 MAP7Q14244 749 aa8.16□□□□□ -1.1
VRK1-207ENST00000557352 CPSF6Q16630 551 aaKnown RBP eCLIP8.16□□□□□ -1.1
VRK1-207ENST00000557352 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.16□□□□□ -1.1
VRK1-207ENST00000557352 GATA6Q92908 595 aa8.16□□□□□ -1.1
VRK1-207ENST00000557352 WDR89Q96FK6 387 aaPredicted RBP8.16□□□□□ -1.1
VRK1-207ENST00000557352 SYNGAP1Q96PV0 1343 aa8.16□□□□□ -1.1
VRK1-207ENST00000557352 ZC3H12CQ9C0D7 883 aaKnown RBP8.16□□□□□ -1.1
VRK1-207ENST00000557352 CCDC86Q9H6F5 360 aaKnown RBP8.16□□□□□ -1.1
VRK1-207ENST00000557352 PPP1R9AQ9ULJ8 1098 aa8.16□□□□□ -1.1
VRK1-207ENST00000557352 IVNS1ABPQ9Y6Y0 642 aa8.16□□□□□ -1.1
VRK1-207ENST00000557352 XRCC5P13010 732 aaKnown RBP8.15□□□□□ -1.1
VRK1-207ENST00000557352 FOSL1P15407 271 aa8.15□□□□□ -1.1
VRK1-207ENST00000557352 TAL1P17542 331 aaPredicted RBP8.15□□□□□ -1.1
VRK1-207ENST00000557352 LIG1P18858 919 aa8.15□□□□□ -1.1
VRK1-207ENST00000557352 NXPE4Q6UWF7 544 aa8.15□□□□□ -1.1
VRK1-207ENST00000557352 METTL22Q9BUU2 404 aaPredicted RBP8.15□□□□□ -1.1
VRK1-207ENST00000557352 GPN3Q9UHW5 284 aaPredicted RBP8.15□□□□□ -1.1
VRK1-207ENST00000557352 FAM170BA6NMN3 283 aa8.14□□□□□ -1.11
VRK1-207ENST00000557352 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
VRK1-207ENST00000557352 MSMPQ1L6U9 139 aa8.14□□□□□ -1.11
VRK1-207ENST00000557352 FMNL2Q96PY5 1086 aa8.14□□□□□ -1.11
VRK1-207ENST00000557352 GOLGA2P5Q9HBQ8 144 aa8.14□□□□□ -1.11
VRK1-207ENST00000557352 TMEM39AQ9NV64 488 aa8.14□□□□□ -1.11
VRK1-207ENST00000557352 TMPRSS2O15393 492 aa8.13□□□□□ -1.11
VRK1-207ENST00000557352 PAX4O43316 350 aa8.13□□□□□ -1.11
VRK1-207ENST00000557352 ZNF862O60290 1169 aa8.13□□□□□ -1.11
VRK1-207ENST00000557352 PPP2R3AQ06190 1150 aa8.13□□□□□ -1.11
VRK1-207ENST00000557352 KCNA1Q09470 495 aa8.13□□□□□ -1.11
VRK1-207ENST00000557352 SEZ6L2Q6UXD5 910 aa8.13□□□□□ -1.11
VRK1-207ENST00000557352 AKAP2Q9Y2D5 859 aa8.13□□□□□ -1.11
VRK1-207ENST00000557352 DYNC1LI2O43237 492 aaPredicted RBP8.12□□□□□ -1.11
VRK1-207ENST00000557352 PDZD3Q86UT5 571 aa8.12□□□□□ -1.11
VRK1-207ENST00000557352 STK35Q8TDR2 534 aa8.12□□□□□ -1.11
VRK1-207ENST00000557352 C1GALT1Q9NS00 363 aa8.12□□□□□ -1.11
VRK1-207ENST00000557352 KRT82Q9NSB4 513 aa8.12□□□□□ -1.11
VRK1-207ENST00000557352 CRIM1Q9NZV1 1036 aa8.12□□□□□ -1.11
VRK1-207ENST00000557352 DAGLAQ9Y4D2 1042 aa8.12□□□□□ -1.11
VRK1-207ENST00000557352 CYP26A1O43174 497 aa8.11□□□□□ -1.11
VRK1-207ENST00000557352 SLFN14P0C7P3 912 aa8.11□□□□□ -1.11
VRK1-207ENST00000557352 MAPK8P45983 427 aa8.11□□□□□ -1.11
VRK1-207ENST00000557352 ID3Q02535 119 aa8.11□□□□□ -1.11
VRK1-207ENST00000557352 FMR1Q06787 632 aaKnown RBP eCLIP8.11□□□□□ -1.11
VRK1-207ENST00000557352 KIF4BQ2VIQ3 1234 aa8.11□□□□□ -1.11
VRK1-207ENST00000557352 NFXL1Q6ZNB6 911 aa8.11□□□□□ -1.11
VRK1-207ENST00000557352 ZSCAN29Q8IWY8 852 aaPredicted RBP8.11□□□□□ -1.11
VRK1-207ENST00000557352 C3orf58Q8NDZ4 430 aa8.11□□□□□ -1.11
VRK1-207ENST00000557352 LGR6Q9HBX8 967 aa8.11□□□□□ -1.11
VRK1-207ENST00000557352 ADGRE2Q9UHX3 823 aa8.11□□□□□ -1.11
VRK1-207ENST00000557352 PCDHGC5Q9Y5F6 944 aa8.11□□□□□ -1.11
VRK1-207ENST00000557352 DUSP27Q5VZP5 1158 aa8.1□□□□□ -1.11
VRK1-207ENST00000557352 ZNF765Q7L2R6 523 aa8.1□□□□□ -1.11
VRK1-207ENST00000557352 SULF2Q8IWU5 870 aa8.1□□□□□ -1.11
VRK1-207ENST00000557352 FBF1Q8TES7 1133 aa8.1□□□□□ -1.11
VRK1-207ENST00000557352 KCNB2Q92953 911 aa8.1□□□□□ -1.11
VRK1-207ENST00000557352 ASB16Q96NS5 453 aa8.1□□□□□ -1.11
VRK1-207ENST00000557352 FANCD2OSQ96PS1 177 aa8.1□□□□□ -1.11
VRK1-207ENST00000557352 SETDB2Q96T68 719 aa8.1□□□□□ -1.11
VRK1-207ENST00000557352 ARNTP27540 789 aa8.09□□□□□ -1.11
VRK1-207ENST00000557352 CYP27A1Q02318 531 aa8.09□□□□□ -1.11
VRK1-207ENST00000557352 ATXN3LQ9H3M9 355 aa8.09□□□□□ -1.11
VRK1-207ENST00000557352 DISC1Q9NRI5 854 aa8.09□□□□□ -1.11
VRK1-207ENST00000557352 CCDC39Q9UFE4 941 aa8.09□□□□□ -1.11
VRK1-207ENST00000557352 PRNPP04156 253 aa8.08□□□□□ -1.12
VRK1-207ENST00000557352 NME2P22392 152 aa8.08□□□□□ -1.12
VRK1-207ENST00000557352 HNRNPUQ00839 825 aaKnown RBP eCLIP8.08□□□□□ -1.12
VRK1-207ENST00000557352 ABI1Q8IZP0 508 aa8.08□□□□□ -1.12
VRK1-207ENST00000557352 OSBPL7Q9BZF2 842 aa8.08□□□□□ -1.12
VRK1-207ENST00000557352 PIDD1Q9HB75 910 aa8.08□□□□□ -1.12
VRK1-207ENST00000557352 WWC3Q9ULE0 1092 aa8.08□□□□□ -1.12
VRK1-207ENST00000557352 GSTT1P30711 240 aa8.07□□□□□ -1.12
VRK1-207ENST00000557352 OGFOD3Q6PK18 319 aa8.07□□□□□ -1.12
VRK1-207ENST00000557352 NECAB3Q96P71 396 aaPredicted RBP8.07□□□□□ -1.12
VRK1-207ENST00000557352 TRAIPQ9BWF2 469 aa8.07□□□□□ -1.12
VRK1-207ENST00000557352 SRCIN1Q9C0H9 1055 aa8.07□□□□□ -1.12
VRK1-207ENST00000557352 LRRC4CQ9HCJ2 640 aa8.07□□□□□ -1.12
VRK1-207ENST00000557352 TXKP42681 527 aa8.06□□□□□ -1.12
VRK1-207ENST00000557352 TTLL4Q14679 1199 aa8.06□□□□□ -1.12
VRK1-207ENST00000557352 MAP1SQ66K74 1059 aaPredicted RBP8.06□□□□□ -1.12
VRK1-207ENST00000557352 ALG1LQ6GMV1 187 aa8.06□□□□□ -1.12
VRK1-207ENST00000557352 SMYD4Q8IYR2 804 aaPredicted RBP8.06□□□□□ -1.12
VRK1-207ENST00000557352 EMILIN2Q9BXX0 1053 aa8.06□□□□□ -1.12
VRK1-207ENST00000557352 BSDC1Q9NW68 430 aaPredicted RBP8.06□□□□□ -1.12
VRK1-207ENST00000557352 ZC3H7BQ9UGR2 993 aaKnown RBP8.06□□□□□ -1.12
VRK1-207ENST00000557352 ANGEL1Q9UNK9 670 aaKnown RBP8.06□□□□□ -1.12
VRK1-207ENST00000557352 ZNF252P-AS1Q0IIN9 211 aa8.05□□□□□ -1.12
VRK1-207ENST00000557352 TPTE2Q6XPS3 522 aa8.05□□□□□ -1.12
VRK1-207ENST00000557352 KRTAP9-9Q9BYP9 154 aa8.05□□□□□ -1.12
VRK1-207ENST00000557352 KRTAP9-4Q9BYQ2 154 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms