RNA–Protein interactions for RNA: ENST00000557249.1

PTPN21-209, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 2

Gene PTPN21, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-209ENST00000557249 DYNC1LI2O43237 492 aaPredicted RBP4.07□□□□□ -1.76
PTPN21-209ENST00000557249 AOC2O75106 756 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 SLFN14P0C7P3 912 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 FAM87AP0C7U9 286 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 RAP1GAPP47736 663 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 PRKCQQ04759 706 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 AOC3Q16853 763 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 ZNF423Q2M1K9 1284 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 ANGEL2Q5VTE6 544 aaKnown RBP4.07□□□□□ -1.76
PTPN21-209ENST00000557249 PEAR1Q5VY43 1037 aaPredicted RBP4.07□□□□□ -1.76
PTPN21-209ENST00000557249 SEZ6L2Q6UXD5 910 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 FAM181AQ8N9Y4 354 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 BHLHE22Q8NFJ8 381 aaPredicted RBP4.07□□□□□ -1.76
PTPN21-209ENST00000557249 GTF3C2Q8WUA4 911 aaPredicted RBP4.07□□□□□ -1.76
PTPN21-209ENST00000557249 HRASLS5Q96KN8 279 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 LIN7BQ9HAP6 207 aa4.07□□□□□ -1.76
PTPN21-209ENST00000557249 MBNL3Q9NUK0 354 aaKnown RBP4.07□□□□□ -1.76
PTPN21-209ENST00000557249 TMEM265A0A087WTH1 108 aa4.06□□□□□ -1.76
PTPN21-209ENST00000557249 FAM13AO94988 1023 aa4.06□□□□□ -1.76
PTPN21-209ENST00000557249 POLR3DP05423 398 aaPredicted RBP4.06□□□□□ -1.76
PTPN21-209ENST00000557249 CTSBP07858 339 aa4.06□□□□□ -1.76
PTPN21-209ENST00000557249 CDK5R2Q13319 367 aa4.06□□□□□ -1.76
PTPN21-209ENST00000557249 KCNMB1Q16558 191 aa4.06□□□□□ -1.76
PTPN21-209ENST00000557249 IFI16Q16666 785 aaKnown RBP4.06□□□□□ -1.76
PTPN21-209ENST00000557249 SPRED3Q2MJR0 410 aa4.06□□□□□ -1.76
PTPN21-209ENST00000557249 LRRN4CLQ8ND94 238 aa4.06□□□□□ -1.76
PTPN21-209ENST00000557249 ATXN3LQ9H3M9 355 aa4.06□□□□□ -1.76
PTPN21-209ENST00000557249 ZFYVE28Q9HCC9 887 aa4.06□□□□□ -1.76
PTPN21-209ENST00000557249 MTMR7Q9Y216 660 aa4.06□□□□□ -1.76
PTPN21-209ENST00000557249 RNGTTO60942 597 aaKnown RBP4.05□□□□□ -1.76
PTPN21-209ENST00000557249 B3GALT4O96024 378 aa4.05□□□□□ -1.76
PTPN21-209ENST00000557249 TRIM26Q12899 539 aaPredicted RBP4.05□□□□□ -1.76
PTPN21-209ENST00000557249 AP3B2Q13367 1082 aa4.05□□□□□ -1.76
PTPN21-209ENST00000557249 MLANAQ16655 118 aa4.05□□□□□ -1.76
PTPN21-209ENST00000557249 SLC23A3Q6PIS1 610 aa4.05□□□□□ -1.76
PTPN21-209ENST00000557249 NPM2Q86SE8 214 aaKnown RBP4.05□□□□□ -1.76
PTPN21-209ENST00000557249 ZSWIM9Q86XI8 627 aa4.05□□□□□ -1.76
PTPN21-209ENST00000557249 CCNJLQ8IV13 435 aa4.05□□□□□ -1.76
PTPN21-209ENST00000557249 PPP1R16BQ96T49 567 aa4.05□□□□□ -1.76
PTPN21-209ENST00000557249 GSX1Q9H4S2 264 aaPredicted RBP4.05□□□□□ -1.76
PTPN21-209ENST00000557249 SSU72Q9NP77 194 aaKnown RBP4.05□□□□□ -1.76
PTPN21-209ENST00000557249 ADAMTS6Q9UKP5 1117 aa4.05□□□□□ -1.76
PTPN21-209ENST00000557249 SYNGAP1Q96PV0 1343 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 A0A1W2PP55 124 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 NEFLP07196 543 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 ZNF865P0CJ78 1059 aaPredicted RBP4.04□□□□□ -1.76
PTPN21-209ENST00000557249 CD96P40200 585 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 GRIA4P48058 902 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 SRPK2P78362 688 aaKnown RBP4.04□□□□□ -1.76
PTPN21-209ENST00000557249 ANKLE2Q86XL3 938 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 WFDC3Q8IUB2 231 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 SMYD4Q8IYR2 804 aaPredicted RBP4.04□□□□□ -1.76
PTPN21-209ENST00000557249 PBXIP1Q96AQ6 731 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 WDR18Q9BV38 432 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 MKNK2Q9HBH9 465 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 PPP1R9AQ9ULJ8 1098 aa4.04□□□□□ -1.76
PTPN21-209ENST00000557249 ECEL1O95672 775 aa4.03□□□□□ -1.76
PTPN21-209ENST00000557249 CEACAM5P06731 702 aa4.03□□□□□ -1.76
PTPN21-209ENST00000557249 LIG1P18858 919 aa4.03□□□□□ -1.76
PTPN21-209ENST00000557249 ITIH2P19823 946 aa4.03□□□□□ -1.76
PTPN21-209ENST00000557249 ID3Q02535 119 aa4.03□□□□□ -1.76
PTPN21-209ENST00000557249 MESP2Q0VG99 397 aa4.03□□□□□ -1.76
PTPN21-209ENST00000557249 MTMR3Q13615 1198 aa4.03□□□□□ -1.76
PTPN21-209ENST00000557249 LILRA6Q6PI73 481 aa4.03□□□□□ -1.76
PTPN21-209ENST00000557249 GALNT12Q8IXK2 581 aa4.03□□□□□ -1.76
PTPN21-209ENST00000557249 TRIM56Q9BRZ2 755 aaKnown RBP4.03□□□□□ -1.76
PTPN21-209ENST00000557249 EHD4Q9H223 541 aa4.03□□□□□ -1.76
PTPN21-209ENST00000557249 TMPRSS2O15393 492 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 AFMP43652 599 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 IKZF1Q13422 519 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 MPZL3Q6UWV2 235 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 LRRC56Q8IYG6 542 aaPredicted RBP4.02□□□□□ -1.77
PTPN21-209ENST00000557249 FLAD1Q8NFF5 587 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 CCER1Q8TC90 406 aaPredicted RBP4.02□□□□□ -1.77
PTPN21-209ENST00000557249 ASB11Q8WXH4 323 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 CCDC97Q96F63 343 aaPredicted RBP4.02□□□□□ -1.77
PTPN21-209ENST00000557249 FANCD2OSQ96PS1 177 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 TCF12Q99081 682 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 KRTAP4-11Q9BYQ6 195 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 ZC3H12CQ9C0D7 883 aaKnown RBP4.02□□□□□ -1.77
PTPN21-209ENST00000557249 ZNF576Q9H609 170 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 CRIM1Q9NZV1 1036 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 SLAIN2Q9P270 581 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 PCOLCE2Q9UKZ9 415 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 SNX11Q9Y5W9 270 aa4.02□□□□□ -1.77
PTPN21-209ENST00000557249 NFIBO00712 420 aa4.01□□□□□ -1.77
PTPN21-209ENST00000557249 TSPAN15O95858 294 aa4.01□□□□□ -1.77
PTPN21-209ENST00000557249 ZSCAN22P10073 491 aaPredicted RBP4.01□□□□□ -1.77
PTPN21-209ENST00000557249 HCLS1P14317 486 aaPredicted RBP4.01□□□□□ -1.77
PTPN21-209ENST00000557249 CFPP27918 469 aa4.01□□□□□ -1.77
PTPN21-209ENST00000557249 OXCT1P55809 520 aa4.01□□□□□ -1.77
PTPN21-209ENST00000557249 FKBP4Q02790 459 aaKnown RBP eCLIP4.01□□□□□ -1.77
PTPN21-209ENST00000557249 ZP2Q05996 745 aa4.01□□□□□ -1.77
PTPN21-209ENST00000557249 SF3B2Q13435 895 aaKnown RBP4.01□□□□□ -1.77
PTPN21-209ENST00000557249 TTLL4Q14679 1199 aa4.01□□□□□ -1.77
PTPN21-209ENST00000557249 SYDE1Q6ZW31 735 aaPredicted RBP4.01□□□□□ -1.77
PTPN21-209ENST00000557249 SIAH1Q8IUQ4 282 aa4.01□□□□□ -1.77
PTPN21-209ENST00000557249 GJD3Q8N144 294 aa4.01□□□□□ -1.77
PTPN21-209ENST00000557249 DUSP23Q9BVJ7 150 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms