RNA–Protein interactions for RNA: ENST00000556971.1

ABCD4-226, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-226ENST00000556971 PROSER3Q2NL68 480 aa16.1■□□□□ 0.17
ABCD4-226ENST00000556971 CERS5Q8N5B7 392 aa16.1■□□□□ 0.17
ABCD4-226ENST00000556971 TMEM39BQ9GZU3 492 aa16.1■□□□□ 0.17
ABCD4-226ENST00000556971 PRDM5Q9NQX1 630 aaPredicted RBP16.1■□□□□ 0.17
ABCD4-226ENST00000556971 CHD8Q9HCK8 2581 aa16.1■□□□□ 0.17
ABCD4-226ENST00000556971 MOGSQ13724 837 aa16.09■□□□□ 0.17
ABCD4-226ENST00000556971 TXNRD3Q86VQ6 643 aa16.09■□□□□ 0.17
ABCD4-226ENST00000556971 SENP6Q9GZR1 1112 aaPredicted RBP16.09■□□□□ 0.17
ABCD4-226ENST00000556971 KCNH4Q9UQ05 1017 aa16.09■□□□□ 0.17
ABCD4-226ENST00000556971 ZNF318Q5VUA4 2279 aa16.08■□□□□ 0.17
ABCD4-226ENST00000556971 RTP1P59025 263 aa16.08■□□□□ 0.16
ABCD4-226ENST00000556971 AIMP1Q12904 312 aaKnown RBP16.08■□□□□ 0.16
ABCD4-226ENST00000556971 MICALL1Q8N3F8 863 aa16.08■□□□□ 0.16
ABCD4-226ENST00000556971 COL26A1Q96A83 441 aa16.08■□□□□ 0.16
ABCD4-226ENST00000556971 C5orf42Q9H799 3197 aa16.08■□□□□ 0.16
ABCD4-226ENST00000556971 IRS4O14654 1257 aaPredicted RBP16.07■□□□□ 0.16
ABCD4-226ENST00000556971 RBM5P52756 815 aaKnown RBP eCLIP16.07■□□□□ 0.162e-6■□□□□ 10.6
ABCD4-226ENST00000556971 TAF7Q15545 349 aaPredicted RBP16.07■□□□□ 0.16
ABCD4-226ENST00000556971 PANK3Q9H999 370 aa16.07■□□□□ 0.16
ABCD4-226ENST00000556971 FRMPD3Q5JV73 1810 aa16.06■□□□□ 0.16
ABCD4-226ENST00000556971 SPEF2Q9C093 1822 aa16.06■□□□□ 0.16
ABCD4-226ENST00000556971 TCP10L2B9ZVM9 353 aa16.06■□□□□ 0.16
ABCD4-226ENST00000556971 PRKAR2AP13861 404 aaKnown RBP16.06■□□□□ 0.16
ABCD4-226ENST00000556971 PPATQ06203 517 aa16.06■□□□□ 0.16
ABCD4-226ENST00000556971 PDIA6Q15084 440 aa16.06■□□□□ 0.16
ABCD4-226ENST00000556971 CCDC85AQ96PX6 553 aaPredicted RBP16.06■□□□□ 0.16
ABCD4-226ENST00000556971 KCNH6Q9H252 994 aa16.06■□□□□ 0.16
ABCD4-226ENST00000556971 ZNF70Q9UC06 446 aaPredicted RBP16.06■□□□□ 0.16
ABCD4-226ENST00000556971 ATP11BQ9Y2G3 1177 aa16.06■□□□□ 0.16
ABCD4-226ENST00000556971 PLXNA1Q9UIW2 1896 aa16.05■□□□□ 0.16
ABCD4-226ENST00000556971 KLRK1P26718 216 aa16.05■□□□□ 0.16
ABCD4-226ENST00000556971 EIF4A1P60842 406 aaKnown RBP16.05■□□□□ 0.16
ABCD4-226ENST00000556971 SPDYE2Q495Y8 402 aa16.05■□□□□ 0.16
ABCD4-226ENST00000556971 GPAT2Q6NUI2 795 aa16.05■□□□□ 0.16
ABCD4-226ENST00000556971 COPS6Q7L5N1 327 aa16.05■□□□□ 0.16
ABCD4-226ENST00000556971 TRIB2Q92519 343 aa16.05■□□□□ 0.16
ABCD4-226ENST00000556971 PTPRZ1P23471 2315 aaPredicted RBP16.05■□□□□ 0.16
ABCD4-226ENST00000556971 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.04■□□□□ 0.16
ABCD4-226ENST00000556971 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.04■□□□□ 0.16
ABCD4-226ENST00000556971 PRKAR2BP31323 418 aa16.04■□□□□ 0.16
ABCD4-226ENST00000556971 EPHB4P54760 987 aa16.04■□□□□ 0.16
ABCD4-226ENST00000556971 SKIV2LQ15477 1246 aaKnown RBP16.04■□□□□ 0.16
ABCD4-226ENST00000556971 XAGE3Q8WTP9 111 aa16.04■□□□□ 0.16
ABCD4-226ENST00000556971 CHD9Q3L8U1 2897 aa16.04■□□□□ 0.16
ABCD4-226ENST00000556971 PBX2P40425 430 aa16.03■□□□□ 0.16
ABCD4-226ENST00000556971 CSPP1Q1MSJ5 1256 aa16.03■□□□□ 0.16
ABCD4-226ENST00000556971 MAP3K21Q5TCX8 1036 aa16.03■□□□□ 0.16
ABCD4-226ENST00000556971 ANKRD18AQ8IVF6 992 aa16.03■□□□□ 0.16
ABCD4-226ENST00000556971 TDRD3Q9H7E2 651 aaKnown RBP16.03■□□□□ 0.16
ABCD4-226ENST00000556971 CD320Q9NPF0 282 aa16.03■□□□□ 0.16
ABCD4-226ENST00000556971 ATP5J2-PTCD1G3V325 749 aa16.01■□□□□ 0.15
ABCD4-226ENST00000556971 ERC2O15083 957 aa16.01■□□□□ 0.15
ABCD4-226ENST00000556971 TLL1O43897 1013 aa16.01■□□□□ 0.15
ABCD4-226ENST00000556971 EIF2S2P20042 333 aaKnown RBP16.01■□□□□ 0.15
ABCD4-226ENST00000556971 CCT4P50991 539 aaKnown RBP16.01■□□□□ 0.15
ABCD4-226ENST00000556971 LHX8Q68G74 356 aa16.01■□□□□ 0.15
ABCD4-226ENST00000556971 SMCR8Q8TEV9 937 aaPredicted RBP16.01■□□□□ 0.15
ABCD4-226ENST00000556971 ANKS1AQ92625 1134 aa16.01■□□□□ 0.15
ABCD4-226ENST00000556971 KMT2BQ9UMN6 2715 aaPredicted RBP16.01■□□□□ 0.15
ABCD4-226ENST00000556971 ATRXP46100 2492 aa16■□□□□ 0.15
ABCD4-226ENST00000556971 ITGB8P26012 769 aa16■□□□□ 0.15
ABCD4-226ENST00000556971 CCND3P30281 292 aaPredicted RBP16■□□□□ 0.15
ABCD4-226ENST00000556971 INPP5BP32019 993 aa16■□□□□ 0.15
ABCD4-226ENST00000556971 ANKRD13CQ8N6S4 541 aa16■□□□□ 0.15
ABCD4-226ENST00000556971 PLXNB2O15031 1838 aa16■□□□□ 0.15
ABCD4-226ENST00000556971 ZFHX2Q9C0A1 2572 aaPredicted RBP16■□□□□ 0.15
ABCD4-226ENST00000556971 CHD7Q9P2D1 2997 aa15.99■□□□□ 0.15
ABCD4-226ENST00000556971 CCDC152Q4G0S7 254 aa15.99■□□□□ 0.15
ABCD4-226ENST00000556971 ERMP1Q7Z2K6 904 aa15.99■□□□□ 0.15
ABCD4-226ENST00000556971 SH3RF1Q7Z6J0 888 aa15.99■□□□□ 0.15
ABCD4-226ENST00000556971 PBX4Q9BYU1 374 aa15.99■□□□□ 0.15
ABCD4-226ENST00000556971 PDLIM7Q9NR12 457 aa15.99■□□□□ 0.15
ABCD4-226ENST00000556971 TPRP12270 2363 aaKnown RBP15.99■□□□□ 0.15
ABCD4-226ENST00000556971 PRRC2BQ5JSZ5 2229 aaKnown RBP15.98■□□□□ 0.15
ABCD4-226ENST00000556971 TRIM43BA6NCK2 446 aa15.98■□□□□ 0.15
ABCD4-226ENST00000556971 GFRA3O60609 400 aa15.98■□□□□ 0.15
ABCD4-226ENST00000556971 TNNI2P48788 182 aa15.98■□□□□ 0.15
ABCD4-226ENST00000556971 CCDC129Q6ZRS4 1044 aa15.98■□□□□ 0.15
ABCD4-226ENST00000556971 TRIM43Q96BQ3 446 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-226ENST00000556971 ISCA1Q9BUE6 129 aa15.98■□□□□ 0.15
ABCD4-226ENST00000556971 BSDC1Q9NW68 430 aaPredicted RBP15.98■□□□□ 0.15
ABCD4-226ENST00000556971 MINPP1Q9UNW1 487 aa15.98■□□□□ 0.15
ABCD4-226ENST00000556971 JAG2Q9Y219 1238 aa15.98■□□□□ 0.15
ABCD4-226ENST00000556971 RLFQ13129 1914 aa15.98■□□□□ 0.15
ABCD4-226ENST00000556971 GRXCR1A8MXD5 290 aa15.97■□□□□ 0.15
ABCD4-226ENST00000556971 RSPH6AQ9H0K4 717 aa15.97■□□□□ 0.15
ABCD4-226ENST00000556971 GJD2Q9UKL4 321 aa15.97■□□□□ 0.15
ABCD4-226ENST00000556971 DCHS1Q96JQ0 3298 aa15.97■□□□□ 0.15
ABCD4-226ENST00000556971 CYP2B6P20813 491 aa15.96■□□□□ 0.15
ABCD4-226ENST00000556971 CACNB2Q08289 660 aaPredicted RBP15.96■□□□□ 0.15
ABCD4-226ENST00000556971 TRIM60Q495X7 471 aa15.96■□□□□ 0.15
ABCD4-226ENST00000556971 ZFHX4Q86UP3 3567 aa15.95■□□□□ 0.14
ABCD4-226ENST00000556971 GADL1Q6ZQY3 521 aa15.95■□□□□ 0.14
ABCD4-226ENST00000556971 PNISRQ8TF01 805 aaKnown RBP15.95■□□□□ 0.14
ABCD4-226ENST00000556971 CD209Q9NNX6 404 aa15.95■□□□□ 0.14
ABCD4-226ENST00000556971 CACNB3P54284 484 aa15.94■□□□□ 0.14
ABCD4-226ENST00000556971 FAM110CQ1W6H9 321 aa15.94■□□□□ 0.14
ABCD4-226ENST00000556971 BRWD1Q9NSI6 2320 aa15.94■□□□□ 0.14
ABCD4-226ENST00000556971 KCTD2Q14681 263 aa15.93■□□□□ 0.14
ABCD4-226ENST00000556971 MIGA2Q7L4E1 593 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms