RNA–Protein interactions for RNA: ENST00000556633.5

GPHN-214, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 512 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-214ENST00000556633 CCDC84Q86UT8 332 aaPredicted RBP5.92□□□□□ -1.46
GPHN-214ENST00000556633 VPS37DQ86XT2 251 aa5.92□□□□□ -1.46
GPHN-214ENST00000556633 FMR1NBQ8N0W7 255 aaPredicted RBP5.92□□□□□ -1.46
GPHN-214ENST00000556633 DCAF11Q8TEB1 546 aa5.92□□□□□ -1.46
GPHN-214ENST00000556633 GAL3ST3Q96A11 431 aa5.92□□□□□ -1.46
GPHN-214ENST00000556633 ACSBG1Q96GR2 724 aa5.92□□□□□ -1.46
GPHN-214ENST00000556633 PLVAPQ9BX97 442 aa5.92□□□□□ -1.46
GPHN-214ENST00000556633 NT5C1AQ9BXI3 368 aa5.92□□□□□ -1.46
GPHN-214ENST00000556633 TANGO6Q9C0B7 1094 aa5.92□□□□□ -1.46
GPHN-214ENST00000556633 KCNK4Q9NYG8 393 aa5.92□□□□□ -1.46
GPHN-214ENST00000556633 UBP1Q9NZI7 540 aa5.92□□□□□ -1.46
GPHN-214ENST00000556633 MKL2Q9ULH7 1088 aa5.92□□□□□ -1.46
GPHN-214ENST00000556633 LOC100289279A0A1B0GTE1 492 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 SPDYE3A6NKU9 549 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 PIK3R2O00459 728 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 TRIM37O94972 964 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 CTSBP07858 339 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 ARID5AQ03989 594 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 PTPN11Q06124 597 aaPredicted RBP5.91□□□□□ -1.46
GPHN-214ENST00000556633 APOBRQ0VD83 1088 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 PDE3AQ14432 1141 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 DIEXFQ68CQ4 756 aaKnown RBP5.91□□□□□ -1.46
GPHN-214ENST00000556633 SCARA3Q6AZY7 606 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 FAM196AQ6ZSG2 479 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 FBXO11Q86XK2 927 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 RASGRP4Q8TDF6 673 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 GPBAR1Q8TDU6 330 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 GATAD2BQ8WXI9 593 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 DRC1Q96MC2 740 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 CCDC86Q9H6F5 360 aaKnown RBP5.91□□□□□ -1.46
GPHN-214ENST00000556633 PPP1R1BQ9UD71 204 aaPredicted RBP5.91□□□□□ -1.46
GPHN-214ENST00000556633 PRKAG2Q9UGJ0 569 aa5.91□□□□□ -1.46
GPHN-214ENST00000556633 FAM221AA4D161 298 aa5.9□□□□□ -1.46
GPHN-214ENST00000556633 FAM229AH3BQW9 127 aa5.9□□□□□ -1.46
GPHN-214ENST00000556633 TLR3O15455 904 aaKnown RBP5.9□□□□□ -1.46
GPHN-214ENST00000556633 CRKP46108 304 aa5.9□□□□□ -1.46
GPHN-214ENST00000556633 TRIM28Q13263 835 aaKnown RBP5.9□□□□□ -1.46
GPHN-214ENST00000556633 PODNQ7Z5L7 613 aa5.9□□□□□ -1.46
GPHN-214ENST00000556633 ZSCAN1Q8NBB4 408 aa5.9□□□□□ -1.46
GPHN-214ENST00000556633 FBXO27Q8NI29 283 aa5.9□□□□□ -1.46
GPHN-214ENST00000556633 UBASH3BQ8TF42 649 aa5.9□□□□□ -1.46
GPHN-214ENST00000556633 SPATA32Q96LK8 384 aa5.9□□□□□ -1.46
GPHN-214ENST00000556633 GMLQ99445 158 aa5.9□□□□□ -1.46
GPHN-214ENST00000556633 KRT82Q9NSB4 513 aa5.9□□□□□ -1.46
GPHN-214ENST00000556633 DLL1O00548 723 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 CILPO75339 1184 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 BPNT1O95861 308 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 ATF4P18848 351 aaPredicted RBP5.89□□□□□ -1.47
GPHN-214ENST00000556633 LORP23490 312 aaPredicted RBP5.89□□□□□ -1.47
GPHN-214ENST00000556633 HNRNPUQ00839 825 aaKnown RBP eCLIP5.89□□□□□ -1.47
GPHN-214ENST00000556633 DUOXA2Q1HG44 320 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 SEZ6Q53EL9 994 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 HP1BP3Q5SSJ5 553 aaPredicted RBP5.89□□□□□ -1.47
GPHN-214ENST00000556633 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.89□□□□□ -1.47
GPHN-214ENST00000556633 NKD1Q969G9 470 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 GINM1Q9NU53 330 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 CACNA2D2Q9NY47 1150 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 PCDHA4Q9UN74 947 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 EFR3BQ9Y2G0 817 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 ROBO2Q9HCK4 1378 aa5.89□□□□□ -1.47
GPHN-214ENST00000556633 ZNF862O60290 1169 aa5.88□□□□□ -1.47
GPHN-214ENST00000556633 WISP1O95388 367 aa5.88□□□□□ -1.47
GPHN-214ENST00000556633 DLGAP3O95886 979 aa5.88□□□□□ -1.47
GPHN-214ENST00000556633 LIG1P18858 919 aa5.88□□□□□ -1.47
GPHN-214ENST00000556633 NASPP49321 788 aaPredicted RBP5.88□□□□□ -1.47
GPHN-214ENST00000556633 MPP2Q14168 576 aa5.88□□□□□ -1.47
GPHN-214ENST00000556633 CWF19L2Q2TBE0 894 aaKnown RBP5.88□□□□□ -1.47
GPHN-214ENST00000556633 PRRT3Q5FWE3 981 aa5.88□□□□□ -1.47
GPHN-214ENST00000556633 MCF2L2Q86YR7 1114 aa5.88□□□□□ -1.47
GPHN-214ENST00000556633 WDR89Q96FK6 387 aaPredicted RBP5.88□□□□□ -1.47
GPHN-214ENST00000556633 SEC16BQ96JE7 1060 aa5.88□□□□□ -1.47
GPHN-214ENST00000556633 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.88□□□□□ -1.472e-7■□□□□ 8.2
GPHN-214ENST00000556633 LRRC3Q9BY71 257 aa5.88□□□□□ -1.47
GPHN-214ENST00000556633 NOP53Q9NZM5 478 aaKnown RBP5.88□□□□□ -1.47
GPHN-214ENST00000556633 FGRP09769 529 aa5.87□□□□□ -1.47
GPHN-214ENST00000556633 ELNP15502 786 aa5.87□□□□□ -1.47
GPHN-214ENST00000556633 ATP2B1P20020 1258 aa5.87□□□□□ -1.47
GPHN-214ENST00000556633 CDK8P49336 464 aa5.87□□□□□ -1.47
GPHN-214ENST00000556633 RPL6Q02878 288 aaKnown RBP5.87□□□□□ -1.47
GPHN-214ENST00000556633 WIPI1Q5MNZ9 446 aaPredicted RBP5.87□□□□□ -1.47
GPHN-214ENST00000556633 ACAD11Q709F0 780 aa5.87□□□□□ -1.47
GPHN-214ENST00000556633 REC114Q7Z4M0 266 aa5.87□□□□□ -1.47
GPHN-214ENST00000556633 SLITRK4Q8IW52 837 aa5.87□□□□□ -1.47
GPHN-214ENST00000556633 BEND7Q8N7W2 519 aaPredicted RBP5.87□□□□□ -1.47
GPHN-214ENST00000556633 RUSC1Q9BVN2 902 aa5.87□□□□□ -1.47
GPHN-214ENST00000556633 ADAMTS8Q9UP79 889 aa5.87□□□□□ -1.47
GPHN-214ENST00000556633 CNTNAP5Q8WYK1 1306 aa5.87□□□□□ -1.47
GPHN-214ENST00000556633 AOC2O75106 756 aa5.86□□□□□ -1.47
GPHN-214ENST00000556633 SELPP16109 830 aa5.86□□□□□ -1.47
GPHN-214ENST00000556633 MCM4P33991 863 aa5.86□□□□□ -1.47
GPHN-214ENST00000556633 GTF2F1P35269 517 aaKnown RBP eCLIP5.86□□□□□ -1.47
GPHN-214ENST00000556633 SOX9P48436 509 aa5.86□□□□□ -1.47
GPHN-214ENST00000556633 COL9A2Q14055 689 aaPredicted RBP5.86□□□□□ -1.47
GPHN-214ENST00000556633 KIF4BQ2VIQ3 1234 aa5.86□□□□□ -1.47
GPHN-214ENST00000556633 EXOSC6Q5RKV6 272 aaKnown RBP5.86□□□□□ -1.47
GPHN-214ENST00000556633 LRFN4Q6PJG9 635 aa5.86□□□□□ -1.47
GPHN-214ENST00000556633 IGF2-ASQ6U949 168 aa5.86□□□□□ -1.47
GPHN-214ENST00000556633 KIAA1211Q6ZU35 1233 aa5.86□□□□□ -1.47
GPHN-214ENST00000556633 UBXN4Q92575 508 aa5.86□□□□□ -1.47
GPHN-214ENST00000556633 PLPPR2Q96GM1 343 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms