RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 MROH7-TTC4A0A0A0MT08 1334 aa24.55■■□□□ 1.52
RCCD1-205ENST00000556333 TTC41PQ6P2S7 1318 aa24.55■■□□□ 1.52
RCCD1-205ENST00000556333 ERC2O15083 957 aa24.54■■□□□ 1.52
RCCD1-205ENST00000556333 MAP3K12Q12852 859 aa24.54■■□□□ 1.52
RCCD1-205ENST00000556333 APOBEC3HQ6NTF7 200 aaKnown RBP24.54■■□□□ 1.52
RCCD1-205ENST00000556333 EDC3Q96F86 508 aaKnown RBP24.54■■□□□ 1.52
RCCD1-205ENST00000556333 HAUS7Q99871 368 aa24.54■■□□□ 1.52
RCCD1-205ENST00000556333 NOL10Q9BSC4 688 aaKnown RBP24.54■■□□□ 1.52
RCCD1-205ENST00000556333 TCP10L2B9ZVM9 353 aa24.53■■□□□ 1.52
RCCD1-205ENST00000556333 BTDP43251 543 aa24.53■■□□□ 1.52
RCCD1-205ENST00000556333 NUCB1Q02818 461 aa24.53■■□□□ 1.52
RCCD1-205ENST00000556333 CDK5RAP2Q96SN8 1893 aa24.52■■□□□ 1.52
RCCD1-205ENST00000556333 CELF2O95319 508 aaKnown RBP24.52■■□□□ 1.52
RCCD1-205ENST00000556333 TNNI2P48788 182 aa24.52■■□□□ 1.52
RCCD1-205ENST00000556333 CACNB3P54284 484 aa24.52■■□□□ 1.52
RCCD1-205ENST00000556333 TNFAIP1Q13829 316 aa24.52■■□□□ 1.52
RCCD1-205ENST00000556333 PRAMEF18Q5VWM3 479 aa24.52■■□□□ 1.52
RCCD1-205ENST00000556333 ZNF384Q8TF68 577 aa24.52■■□□□ 1.52
RCCD1-205ENST00000556333 CDCA5Q96FF9 252 aa24.52■■□□□ 1.52
RCCD1-205ENST00000556333 USP40Q9NVE5 1235 aa24.52■■□□□ 1.52
RCCD1-205ENST00000556333 GAKO14976 1311 aa24.52■■□□□ 1.52
RCCD1-205ENST00000556333 MAGEB6Q8N7X4 407 aa24.51■■□□□ 1.51
RCCD1-205ENST00000556333 FAM163AQ96GL9 167 aaPredicted RBP24.51■■□□□ 1.51
RCCD1-205ENST00000556333 DEFB129Q9H1M3 183 aa24.51■■□□□ 1.51
RCCD1-205ENST00000556333 TMEM88BA6NKF7 163 aa24.5■■□□□ 1.51
RCCD1-205ENST00000556333 IGSF3O75054 1194 aa24.5■■□□□ 1.51
RCCD1-205ENST00000556333 CYP7A1P22680 504 aa24.5■■□□□ 1.51
RCCD1-205ENST00000556333 CDC42EP5Q6NZY7 148 aa24.5■■□□□ 1.51
RCCD1-205ENST00000556333 GLRX3O76003 335 aaKnown RBP24.49■■□□□ 1.51
RCCD1-205ENST00000556333 MAP4K4O95819 1239 aaPredicted RBP24.49■■□□□ 1.51
RCCD1-205ENST00000556333 NF2P35240 595 aa24.49■■□□□ 1.51
RCCD1-205ENST00000556333 SALL3Q9BXA9 1300 aa24.49■■□□□ 1.51
RCCD1-205ENST00000556333 GPR75-ASB3A0A0A6YYF3 556 aa24.48■■□□□ 1.51
RCCD1-205ENST00000556333 PDE1AP54750 535 aa24.48■■□□□ 1.51
RCCD1-205ENST00000556333 RASA3Q14644 834 aa24.48■■□□□ 1.51
RCCD1-205ENST00000556333 SLC9C2Q5TAH2 1124 aa24.48■■□□□ 1.51
RCCD1-205ENST00000556333 FOCADQ5VW36 1801 aa24.48■■□□□ 1.51
RCCD1-205ENST00000556333 PI4K2BQ8TCG2 481 aa24.48■■□□□ 1.51
RCCD1-205ENST00000556333 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.48■■□□□ 1.517e-7■■■□□ 16.2
RCCD1-205ENST00000556333 AATFQ9NY61 560 aaKnown RBP eCLIP24.48■■□□□ 1.51
RCCD1-205ENST00000556333 PPP2R3BQ9Y5P8 575 aa24.48■■□□□ 1.51
RCCD1-205ENST00000556333 BAG3O95817 575 aa24.47■■□□□ 1.51
RCCD1-205ENST00000556333 CST9Q5W186 159 aa24.47■■□□□ 1.51
RCCD1-205ENST00000556333 CCDC136Q96JN2 1154 aa24.47■■□□□ 1.51
RCCD1-205ENST00000556333 CREBZFQ9NS37 354 aa24.47■■□□□ 1.51
RCCD1-205ENST00000556333 ABT1Q9ULW3 272 aaKnown RBP24.47■■□□□ 1.51
RCCD1-205ENST00000556333 ADGRA1Q86SQ6 560 aa24.46■■□□□ 1.51
RCCD1-205ENST00000556333 PDE6AP16499 860 aa24.45■■□□□ 1.5
RCCD1-205ENST00000556333 TCP10Q12799 353 aa24.45■■□□□ 1.5
RCCD1-205ENST00000556333 PICALMQ13492 652 aa24.45■■□□□ 1.5
RCCD1-205ENST00000556333 C2orf69Q8N8R5 385 aa24.45■■□□□ 1.5
RCCD1-205ENST00000556333 TMEM39BQ9GZU3 492 aa24.45■■□□□ 1.5
RCCD1-205ENST00000556333 STAP2Q9UGK3 403 aa24.45■■□□□ 1.5
RCCD1-205ENST00000556333 TTLL12Q14166 644 aaPredicted RBP24.44■■□□□ 1.5
RCCD1-205ENST00000556333 ZSCAN25Q6NSZ9 544 aa24.44■■□□□ 1.5
RCCD1-205ENST00000556333 MIGA1Q8NAN2 632 aa24.44■■□□□ 1.5
RCCD1-205ENST00000556333 GBA2Q9HCG7 927 aaPredicted RBP24.44■■□□□ 1.5
RCCD1-205ENST00000556333 PAPPA2Q9BXP8 1791 aa24.44■■□□□ 1.5
RCCD1-205ENST00000556333 ZNF532Q9HCE3 1301 aa24.43■■□□□ 1.5
RCCD1-205ENST00000556333 PLCG2P16885 1265 aa24.43■■□□□ 1.5
RCCD1-205ENST00000556333 NFIAQ12857 509 aa24.43■■□□□ 1.5
RCCD1-205ENST00000556333 PRKG1Q13976 671 aa24.43■■□□□ 1.5
RCCD1-205ENST00000556333 FKBP1CQ5VVH2 108 aa24.43■■□□□ 1.5
RCCD1-205ENST00000556333 TMED8Q6PL24 325 aaPredicted RBP24.43■■□□□ 1.5
RCCD1-205ENST00000556333 FAM83AQ86UY5 434 aa24.43■■□□□ 1.5
RCCD1-205ENST00000556333 PLEKHM2Q8IWE5 1019 aa24.43■■□□□ 1.5
RCCD1-205ENST00000556333 TEX11Q8IYF3 940 aa24.43■■□□□ 1.5
RCCD1-205ENST00000556333 MYH1P12882 1939 aa24.43■■□□□ 1.5
RCCD1-205ENST00000556333 CNTNAP1P78357 1384 aa24.42■■□□□ 1.5
RCCD1-205ENST00000556333 RHBDL3P58872 404 aa24.42■■□□□ 1.5
RCCD1-205ENST00000556333 DYNLL1P63167 89 aaKnown RBP24.42■■□□□ 1.5
RCCD1-205ENST00000556333 SUPT20HL1Q3ZLR7 823 aa24.42■■□□□ 1.5
RCCD1-205ENST00000556333 NBPF12Q5TAG4 269 aaPredicted RBP24.42■■□□□ 1.5
RCCD1-205ENST00000556333 CENPQQ7L2Z9 268 aaPredicted RBP24.42■■□□□ 1.5
RCCD1-205ENST00000556333 KBTBD3Q8NAB2 608 aa24.42■■□□□ 1.5
RCCD1-205ENST00000556333 SH3RF3Q8TEJ3 882 aaPredicted RBP24.42■■□□□ 1.5
RCCD1-205ENST00000556333 ADD2P35612 726 aa24.41■■□□□ 1.5
RCCD1-205ENST00000556333 RGS3P49796 1198 aa24.41■■□□□ 1.5
RCCD1-205ENST00000556333 FAM151AQ8WW52 585 aa24.41■■□□□ 1.5
RCCD1-205ENST00000556333 FSD1Q9BTV5 496 aa24.41■■□□□ 1.5
RCCD1-205ENST00000556333 FAM198AQ9UFP1 575 aa24.41■■□□□ 1.5
RCCD1-205ENST00000556333 MKRN1Q9UHC7 482 aaKnown RBP24.41■■□□□ 1.5
RCCD1-205ENST00000556333 MAGEB6P1A0A0J9YX57 407 aa24.4■■□□□ 1.5
RCCD1-205ENST00000556333 PPP4CP60510 307 aa24.4■■□□□ 1.5
RCCD1-205ENST00000556333 PAXIP1Q6ZW49 1069 aaPredicted RBP24.4■■□□□ 1.5
RCCD1-205ENST00000556333 ZSCAN29Q8IWY8 852 aaPredicted RBP24.4■■□□□ 1.5
RCCD1-205ENST00000556333 IDI2Q9BXS1 227 aa24.4■■□□□ 1.5
RCCD1-205ENST00000556333 TLL2Q9Y6L7 1015 aa24.4■■□□□ 1.5
RCCD1-205ENST00000556333 NAV1Q8NEY1 1877 aa24.39■■□□□ 1.5
RCCD1-205ENST00000556333 TRIM6-TRIM34B2RNG4 842 aa24.39■■□□□ 1.49
RCCD1-205ENST00000556333 WDHD1O75717 1129 aaPredicted RBP24.39■■□□□ 1.49
RCCD1-205ENST00000556333 LRRFIP1Q32MZ4 808 aaKnown RBP24.39■■□□□ 1.49
RCCD1-205ENST00000556333 SLFNL1Q499Z3 407 aa24.39■■□□□ 1.49
RCCD1-205ENST00000556333 CERS3Q8IU89 383 aa24.39■■□□□ 1.49
RCCD1-205ENST00000556333 CDAN1Q8IWY9 1227 aa24.39■■□□□ 1.49
RCCD1-205ENST00000556333 TCRBV5S4A2TA0A5A2 114 aa24.38■■□□□ 1.49
RCCD1-205ENST00000556333 ENTPD3O75355 529 aa24.38■■□□□ 1.49
RCCD1-205ENST00000556333 PDE4AP27815 886 aa24.38■■□□□ 1.49
RCCD1-205ENST00000556333 HUNKP57058 714 aa24.38■■□□□ 1.49
RCCD1-205ENST00000556333 MOB2Q70IA6 237 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms