RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 KNDC1Q76NI1 1749 aa17.1■□□□□ 0.33
NEK9-209ENST00000556170 SPDYE4A6NLX3 237 aa17.09■□□□□ 0.33
NEK9-209ENST00000556170 CAVIN2O95810 425 aa17.09■□□□□ 0.33
NEK9-209ENST00000556170 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
NEK9-209ENST00000556170 DENND2AQ9ULE3 1009 aa17.09■□□□□ 0.33
NEK9-209ENST00000556170 PTPN21Q16825 1174 aa17.09■□□□□ 0.33
NEK9-209ENST00000556170 TOP1P11387 765 aaKnown RBP17.09■□□□□ 0.33
NEK9-209ENST00000556170 ADD2P35612 726 aa17.09■□□□□ 0.33
NEK9-209ENST00000556170 UBASH3AP57075 661 aa17.09■□□□□ 0.33
NEK9-209ENST00000556170 ELP1O95163 1332 aa17.08■□□□□ 0.33
NEK9-209ENST00000556170 PIK3C2AO00443 1686 aa17.08■□□□□ 0.33
NEK9-209ENST00000556170 BTBD18B2RXH4 712 aa17.08■□□□□ 0.32
NEK9-209ENST00000556170 DYNC1I1O14576 645 aa17.08■□□□□ 0.32
NEK9-209ENST00000556170 GNPATO15228 680 aa17.08■□□□□ 0.32
NEK9-209ENST00000556170 RASGRF1Q13972 1273 aa17.08■□□□□ 0.32
NEK9-209ENST00000556170 FER1L4A9Z1Z3 1794 aa17.08■□□□□ 0.32
NEK9-209ENST00000556170 DHX58Q96C10 678 aa17.08■□□□□ 0.32
NEK9-209ENST00000556170 STX17P56962 302 aa17.07■□□□□ 0.32
NEK9-209ENST00000556170 AKNAD1Q5T1N1 836 aa17.07■□□□□ 0.32
NEK9-209ENST00000556170 ANKRD20A12PQ8NF67 263 aa17.07■□□□□ 0.32
NEK9-209ENST00000556170 TMEM87BQ96K49 555 aa17.07■□□□□ 0.32
NEK9-209ENST00000556170 V9GY48 417 aaPredicted RBP17.07■□□□□ 0.32
NEK9-209ENST00000556170 PATL2C9JE40 543 aaKnown RBP17.07■□□□□ 0.32
NEK9-209ENST00000556170 CHRNDQ07001 517 aa17.07■□□□□ 0.32
NEK9-209ENST00000556170 USPL1Q5W0Q7 1092 aa17.07■□□□□ 0.32
NEK9-209ENST00000556170 APOA5Q6Q788 366 aa17.07■□□□□ 0.32
NEK9-209ENST00000556170 AATFQ9NY61 560 aaKnown RBP eCLIP17.07■□□□□ 0.32
NEK9-209ENST00000556170 MCM9Q9NXL9 1143 aa17.07■□□□□ 0.32
NEK9-209ENST00000556170 RCOR1Q9UKL0 485 aa17.07■□□□□ 0.32
NEK9-209ENST00000556170 MROH5Q6ZUA9 1318 aa17.07■□□□□ 0.32
NEK9-209ENST00000556170 TSR1Q2NL82 804 aaKnown RBP17.06■□□□□ 0.32
NEK9-209ENST00000556170 ADALQ6DHV7 355 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 LMTK3Q96Q04 1460 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 CYP19A1P11511 503 aaPredicted RBP17.06■□□□□ 0.32
NEK9-209ENST00000556170 RFC4P35249 363 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 IL6STP40189 918 aaPredicted RBP17.06■□□□□ 0.32
NEK9-209ENST00000556170 CEP135Q66GS9 1140 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 TBC1D10CQ8IV04 446 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 STAMQ92783 540 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 SMARCE1Q969G3 411 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 PRIMPOLQ96LW4 560 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 ZSWIM5Q9P217 1185 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 PFKFB1P16118 471 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 CEP131Q9UPN4 1083 aa17.06■□□□□ 0.32
NEK9-209ENST00000556170 CYP2D7A0A087X1C5 515 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 TSGA10IPQ3SY00 556 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 PARP10Q53GL7 1025 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 ZNF444Q8N0Y2 327 aaPredicted RBP17.05■□□□□ 0.32
NEK9-209ENST00000556170 LCORLQ8N3X6 602 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 VPS54Q9P1Q0 977 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 C6orf229H3BNL8 230 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 RIOK3O14730 519 aaKnown RBP17.05■□□□□ 0.32
NEK9-209ENST00000556170 CBFA2T2O43439 604 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 TXLNAP40222 546 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 PNOCQ13519 176 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 ARID5BQ14865 1188 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 FAM47AQ5JRC9 791 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 KIF18AQ8NI77 898 aa17.05■□□□□ 0.32
NEK9-209ENST00000556170 POLR2DO15514 142 aaKnown RBP17.04■□□□□ 0.32
NEK9-209ENST00000556170 PPFIBP1Q86W92 1011 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 GOLPH3LQ9H4A5 285 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 KIAA1468Q9P260 1216 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 KCNH3Q9ULD8 1083 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 AKAP12Q02952 1782 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 CASP7P55210 303 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 UBE3CQ15386 1083 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 ZNF174Q15697 407 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 DPCR1Q3MIW9 517 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 ATL3Q6DD88 541 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 CYB5R4Q7L1T6 521 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 TMTC2Q8N394 836 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 FBXO3Q9UK99 471 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 USP17L12C9JPN9 530 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 USP17L21D6R901 530 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 KCNQ2O43526 872 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 URI1O94763 535 aaPredicted RBP17.04■□□□□ 0.32
NEK9-209ENST00000556170 FILIP1LQ4L180 1135 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 PPP4R3BQ5MIZ7 849 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 CRNKL1Q9BZJ0 848 aaKnown RBP17.04■□□□□ 0.32
NEK9-209ENST00000556170 RIPOR2Q9Y4F9 1068 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 VIRMAQ69YN4 1812 aaKnown RBP17.04■□□□□ 0.32
NEK9-209ENST00000556170 F8W031 263 aaPredicted RBP17.04■□□□□ 0.32
NEK9-209ENST00000556170 GNAT2P19087 354 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 ZNF827Q17R98 1081 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 LINC00301Q8NCQ3 95 aa17.04■□□□□ 0.32
NEK9-209ENST00000556170 SMARCC1Q92922 1105 aaPredicted RBP17.04■□□□□ 0.32
NEK9-209ENST00000556170 CTDNEP1O95476 244 aa17.03■□□□□ 0.32
NEK9-209ENST00000556170 KRI1Q8N9T8 703 aaKnown RBP17.03■□□□□ 0.32
NEK9-209ENST00000556170 TRIM75PA6NK02 468 aa17.03■□□□□ 0.32
NEK9-209ENST00000556170 EXOSC10Q01780 885 aaKnown RBP17.03■□□□□ 0.32
NEK9-209ENST00000556170 ZBTB9Q96C00 473 aa17.03■□□□□ 0.32
NEK9-209ENST00000556170 UBAP1LF5GYI3 381 aa17.03■□□□□ 0.32
NEK9-209ENST00000556170 DYNLL1P63167 89 aaKnown RBP17.03■□□□□ 0.32
NEK9-209ENST00000556170 TPTE2Q6XPS3 522 aa17.03■□□□□ 0.32
NEK9-209ENST00000556170 PLIN2Q99541 437 aa17.03■□□□□ 0.32
NEK9-209ENST00000556170 ZNF219Q9P2Y4 722 aaPredicted RBP17.03■□□□□ 0.32
NEK9-209ENST00000556170 DACH1Q9UI36 760 aa17.03■□□□□ 0.32
NEK9-209ENST00000556170 CACTINQ8WUQ7 758 aaKnown RBP17.02■□□□□ 0.32
NEK9-209ENST00000556170 STRBPQ96SI9 672 aaKnown RBP17.02■□□□□ 0.32
NEK9-209ENST00000556170 XPO4Q9C0E2 1151 aaKnown RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms