RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 CCDC102BQ68D86 513 aa8.9□□□□□ -0.98
CHD8-209ENST00000555935 OTUD7BQ6GQQ9 843 aa8.9□□□□□ -0.98
CHD8-209ENST00000555935 ZNF530Q6P9A1 599 aaPredicted RBP8.9□□□□□ -0.98
CHD8-209ENST00000555935 DBNDD2Q9BQY9 259 aa8.9□□□□□ -0.98
CHD8-209ENST00000555935 LAMA4Q16363 1823 aa8.9□□□□□ -0.99
CHD8-209ENST00000555935 KIF28PB7ZC32 967 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 CPLX1O14810 134 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 PPFIA4O75335 1185 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 HSPD1P10809 573 aaKnown RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 ADKP55263 362 aaKnown RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 PIP4K2BP78356 416 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 PTPN12Q05209 780 aaKnown RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 CASP8Q14790 479 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 KARSQ15046 597 aaKnown RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 WHAMMP3Q1A5X7 153 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 AMOTQ4VCS5 1084 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 SHC4Q6S5L8 630 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 RIC3Q7Z5B4 369 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 PACS2Q86VP3 889 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 SUGP1Q8IWZ8 645 aaKnown RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 EFCAB13Q8IY85 973 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 MLKLQ8NB16 471 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 ENOX1Q8TC92 643 aaKnown RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 VIPAS39Q9H9C1 493 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 MRPL44Q9H9J2 332 aaKnown RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 ABCB6Q9NP58 842 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 RAI14Q9P0K7 980 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 AKR1B15C9JRZ8 316 aaPredicted RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 RNMTO43148 476 aaKnown RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 MARCKSP29966 332 aaPredicted RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 RABL6Q3YEC7 729 aaPredicted RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 METTL16Q86W50 562 aaKnown RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 CERS3Q8IU89 383 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 NUTM2AQ8IVF1 878 aaPredicted RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 CTCFLQ8NI51 663 aaPredicted RBP8.89□□□□□ -0.99
CHD8-209ENST00000555935 IP6K1Q92551 441 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 PNKPQ96T60 521 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 NCAPGQ9BPX3 1015 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 DEF6Q9H4E7 631 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 PAG1Q9NWQ8 432 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 AKAP2Q9Y2D5 859 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 ADGRG1Q9Y653 693 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 WDR19Q8NEZ3 1342 aa8.89□□□□□ -0.99
CHD8-209ENST00000555935 CTAGE9A4FU28 777 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 GOLGA8BA8MQT2 603 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 PPFIA3O75145 1194 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 CHGBP05060 677 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 ATP2B1P20020 1258 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 PTPAQ15257 358 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 EPHA10Q5JZY3 1008 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 LRRC31Q6UY01 552 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 TRIML1Q8N9V2 468 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 CNNM3Q8NE01 707 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 CCDC102AQ96A19 550 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 MYCBPQ99417 103 aaPredicted RBP8.88□□□□□ -0.99
CHD8-209ENST00000555935 DESI2Q9BSY9 194 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.88□□□□□ -0.99
CHD8-209ENST00000555935 PUF60Q9UHX1 559 aaKnown RBP8.88□□□□□ -0.99
CHD8-209ENST00000555935 PCDHA5Q9Y5H7 936 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 NDUFB9Q9Y6M9 179 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 TNRQ92752 1358 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 KLF18A0A0U1RQI7 1052 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 CTAGE15A4D2H0 777 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 CTAGE8P0CG41 777 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 AARSP49588 968 aaKnown RBP eCLIP8.88□□□□□ -0.99
CHD8-209ENST00000555935 EIF5P55010 431 aaKnown RBP8.88□□□□□ -0.99
CHD8-209ENST00000555935 WDR93Q6P2C0 686 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 CTAGE6Q86UF2 777 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 CTAGE4Q8IX94 777 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 ZSWIM4Q9H7M6 989 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 MYO1AQ9UBC5 1043 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 KCNH3Q9ULD8 1083 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 HPS5Q9UPZ3 1129 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 NFE2L3Q9Y4A8 694 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 MAST3O60307 1309 aa8.88□□□□□ -0.99
CHD8-209ENST00000555935 MARF1Q9Y4F3 1742 aaKnown RBP8.87□□□□□ -0.99
CHD8-209ENST00000555935 N4BP1O75113 896 aaKnown RBP8.87□□□□□ -0.99
CHD8-209ENST00000555935 MCM3P25205 808 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 PDE4BQ07343 736 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 NR1I3Q14994 352 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 KIF4BQ2VIQ3 1234 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 DNAJC21Q5F1R6 531 aaKnown RBP8.87□□□□□ -0.99
CHD8-209ENST00000555935 CT47A1Q5JQC4 288 aaPredicted RBP8.87□□□□□ -0.99
CHD8-209ENST00000555935 C1orf141Q5JVX7 400 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 NT5DC1Q5TFE4 455 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 NBPF6Q5VWK0 638 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 MPRIPQ6WCQ1 1025 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 CHST3Q7LGC8 479 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 TEX2Q8IWB9 1127 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 NBPF4Q96M43 638 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 METTL22Q9BUU2 404 aaPredicted RBP8.87□□□□□ -0.99
CHD8-209ENST00000555935 TTF2Q9UNY4 1162 aaKnown RBP8.87□□□□□ -0.99
CHD8-209ENST00000555935 A0A087WUV0 522 aaPredicted RBP8.87□□□□□ -0.99
CHD8-209ENST00000555935 A0A1B0GTH6 734 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 GOLIM4O00461 696 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 RNF113AO15541 343 aaKnown RBP8.87□□□□□ -0.99
CHD8-209ENST00000555935 PRC1O43663 620 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 CDKL5O76039 1030 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 VSNL1P62760 191 aa8.87□□□□□ -0.99
CHD8-209ENST00000555935 MDM2Q00987 491 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms