RNA–Protein interactions for RNA: ENST00000555628.5

PRKCH-218, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-218ENST00000555628 CDC5LQ99459 802 aaKnown RBP11.79□□□□□ -0.52
PRKCH-218ENST00000555628 ZBED2Q9BTP6 218 aa11.79□□□□□ -0.52
PRKCH-218ENST00000555628 METTL22Q9BUU2 404 aaPredicted RBP11.79□□□□□ -0.52
PRKCH-218ENST00000555628 MBIPQ9NS73 344 aa11.79□□□□□ -0.52
PRKCH-218ENST00000555628 PTCH2Q9Y6C5 1203 aa11.79□□□□□ -0.52
PRKCH-218ENST00000555628 USP2O75604 605 aaPredicted RBP11.78□□□□□ -0.52
PRKCH-218ENST00000555628 TSR1Q2NL82 804 aaKnown RBP11.78□□□□□ -0.52
PRKCH-218ENST00000555628 NBPF12Q5TAG4 269 aaPredicted RBP11.78□□□□□ -0.52
PRKCH-218ENST00000555628 TTLL5Q6EMB2 1281 aa11.78□□□□□ -0.52
PRKCH-218ENST00000555628 LEMD3Q9Y2U8 911 aa11.78□□□□□ -0.52
PRKCH-218ENST00000555628 BRI3BPQ8WY22 251 aa11.77□□□□□ -0.53
PRKCH-218ENST00000555628 SPTBN5Q9NRC6 3674 aaKnown RBP11.76□□□□□ -0.53
PRKCH-218ENST00000555628 GTF2IP78347 998 aa11.76□□□□□ -0.53
PRKCH-218ENST00000555628 C15orf52Q6ZUT6 534 aaKnown RBP11.76□□□□□ -0.53
PRKCH-218ENST00000555628 CCDC146Q8IYE0 955 aa11.76□□□□□ -0.53
PRKCH-218ENST00000555628 PRMT6Q96LA8 375 aaPredicted RBP11.76□□□□□ -0.53
PRKCH-218ENST00000555628 TEPSINQ96N21 525 aa11.76□□□□□ -0.53
PRKCH-218ENST00000555628 RBM27Q9P2N5 1060 aaKnown RBP11.76□□□□□ -0.53
PRKCH-218ENST00000555628 LAMA2P24043 3122 aaKnown RBP11.75□□□□□ -0.53
PRKCH-218ENST00000555628 PPP1R12BO60237 982 aaPredicted RBP11.75□□□□□ -0.53
PRKCH-218ENST00000555628 CASP7P55210 303 aa11.75□□□□□ -0.53
PRKCH-218ENST00000555628 DLGAP5Q15398 846 aa11.75□□□□□ -0.53
PRKCH-218ENST00000555628 PROX2Q3B8N5 592 aa11.75□□□□□ -0.53
PRKCH-218ENST00000555628 SLC9C1Q4G0N8 1177 aa11.75□□□□□ -0.53
PRKCH-218ENST00000555628 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.75□□□□□ -0.53
PRKCH-218ENST00000555628 ANKRD13AQ8IZ07 590 aa11.75□□□□□ -0.53
PRKCH-218ENST00000555628 OPTNQ96CV9 577 aa11.75□□□□□ -0.53
PRKCH-218ENST00000555628 PLA2G12BQ9BX93 195 aa11.75□□□□□ -0.53
PRKCH-218ENST00000555628 SLC4A5Q9BY07 1137 aa11.75□□□□□ -0.53
PRKCH-218ENST00000555628 CD209Q9NNX6 404 aa11.75□□□□□ -0.53
PRKCH-218ENST00000555628 LAS1LQ9Y4W2 734 aaKnown RBP11.75□□□□□ -0.53
PRKCH-218ENST00000555628 CLRN2A0PK11 232 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 SNAP23O00161 211 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 SEMA3EO15041 775 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 MAP3K7O43318 606 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 RASA3Q14644 834 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 NEUROD2Q15784 382 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 SUPT20HL1Q3ZLR7 823 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 FAM43AQ8N2R8 423 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 RUNDC1Q96C34 613 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 ARHGAP39Q9C0H5 1083 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 MAP3K2Q9Y2U5 619 aa11.74□□□□□ -0.53
PRKCH-218ENST00000555628 PPP1R3GB7ZBB8 358 aa11.73□□□□□ -0.53
PRKCH-218ENST00000555628 H7C1W4 665 aa11.73□□□□□ -0.53
PRKCH-218ENST00000555628 CSF1RP07333 972 aa11.73□□□□□ -0.53
PRKCH-218ENST00000555628 IL1R1P14778 569 aa11.73□□□□□ -0.53
PRKCH-218ENST00000555628 IREB2P48200 963 aaKnown RBP11.73□□□□□ -0.53
PRKCH-218ENST00000555628 FKBP1AP62942 108 aaKnown RBP11.73□□□□□ -0.53
PRKCH-218ENST00000555628 CFAP100Q494V2 611 aa11.73□□□□□ -0.53
PRKCH-218ENST00000555628 EYSQ5T1H1 3165 aa11.73□□□□□ -0.53
PRKCH-218ENST00000555628 OTUD7BQ6GQQ9 843 aa11.73□□□□□ -0.53
PRKCH-218ENST00000555628 C8orf58Q8NAV2 365 aa11.73□□□□□ -0.53
PRKCH-218ENST00000555628 SH3TC2Q8TF17 1288 aa11.73□□□□□ -0.53
PRKCH-218ENST00000555628 RNF166Q96A37 237 aaPredicted RBP11.73□□□□□ -0.53
PRKCH-218ENST00000555628 ADGRA2Q96PE1 1338 aa11.72□□□□□ -0.53
PRKCH-218ENST00000555628 NEURL1BA8MQ27 555 aa11.72□□□□□ -0.53
PRKCH-218ENST00000555628 BHMG1C9JSJ3 638 aaPredicted RBP11.72□□□□□ -0.53
PRKCH-218ENST00000555628 CTGFP29279 349 aa11.72□□□□□ -0.53
PRKCH-218ENST00000555628 VGLL4Q14135 290 aa11.72□□□□□ -0.53
PRKCH-218ENST00000555628 CWF19L2Q2TBE0 894 aaKnown RBP11.72□□□□□ -0.53
PRKCH-218ENST00000555628 NBPF11Q86T75 865 aa11.72□□□□□ -0.53
PRKCH-218ENST00000555628 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.72□□□□□ -0.53
PRKCH-218ENST00000555628 ANKRD2Q9GZV1 360 aa11.72□□□□□ -0.53
PRKCH-218ENST00000555628 ELP3Q9H9T3 547 aa11.72□□□□□ -0.53
PRKCH-218ENST00000555628 IFT57Q9NWB7 429 aa11.72□□□□□ -0.53
PRKCH-218ENST00000555628 ALPK3Q96L96 1907 aa11.71□□□□□ -0.53
PRKCH-218ENST00000555628 PI4KAP2A4QPH2 592 aa11.71□□□□□ -0.53
PRKCH-218ENST00000555628 DLL1O00548 723 aa11.71□□□□□ -0.53
PRKCH-218ENST00000555628 ITGA6P23229 1130 aa11.71□□□□□ -0.53
PRKCH-218ENST00000555628 LACTBP83111 547 aaPredicted RBP11.71□□□□□ -0.53
PRKCH-218ENST00000555628 CHRNDQ07001 517 aa11.71□□□□□ -0.53
PRKCH-218ENST00000555628 MTFR1Q15390 333 aa11.71□□□□□ -0.53
PRKCH-218ENST00000555628 TAF1CQ15572 869 aaPredicted RBP11.71□□□□□ -0.53
PRKCH-218ENST00000555628 KSR2Q6VAB6 950 aa11.71□□□□□ -0.53
PRKCH-218ENST00000555628 PI4KAP1Q8N8J0 262 aa11.71□□□□□ -0.53
PRKCH-218ENST00000555628 FAM205AQ6ZU69 1335 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 CCL15-CCL14A0A0B4J2E2 113 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 SOX1O00570 391 aaPredicted RBP11.7□□□□□ -0.54
PRKCH-218ENST00000555628 TLR2O60603 784 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 RALBP1Q15311 655 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 CCL15Q16663 113 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 SLC4A8Q2Y0W8 1093 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 UBE3BQ7Z3V4 1068 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 TSPYL6Q8N831 410 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 VEZTQ9HBM0 779 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 ZFYVE28Q9HCC9 887 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 ZCCHC17Q9NP64 241 aaKnown RBP11.7□□□□□ -0.54
PRKCH-218ENST00000555628 SNCAIPQ9Y6H5 919 aa11.7□□□□□ -0.54
PRKCH-218ENST00000555628 SPDYE5A6NIY4 337 aa11.69□□□□□ -0.54
PRKCH-218ENST00000555628 F8W031 263 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-218ENST00000555628 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-218ENST00000555628 DDX58O95786 925 aaKnown RBP11.69□□□□□ -0.54
PRKCH-218ENST00000555628 IGHMBP2P38935 993 aaKnown RBP11.69□□□□□ -0.54
PRKCH-218ENST00000555628 GTF2A2P52657 109 aa11.69□□□□□ -0.54
PRKCH-218ENST00000555628 CDHR5Q9HBB8 845 aa11.69□□□□□ -0.54
PRKCH-218ENST00000555628 ZNF70Q9UC06 446 aaPredicted RBP11.69□□□□□ -0.54
PRKCH-218ENST00000555628 MUC3AQ02505 3323 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 BTBD19C9JJ37 291 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 MYO1BO43795 1136 aa11.68□□□□□ -0.54
PRKCH-218ENST00000555628 MYCP01106 439 aaPredicted RBP11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms