RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 VGLL2Q8N8G2 317 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 WASF1Q92558 559 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 MTA3Q9BTC8 594 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 KIF28PB7ZC32 967 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 LIFRP42702 1097 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 SYKP43405 635 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 DPCR1Q3MIW9 517 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 NOL10Q9BSC4 688 aaKnown RBP18.71■□□□□ 0.59
TUBB3-209ENST00000555609 CNNM1Q9NRU3 951 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 OGFRQ9NZT2 677 aa18.71■□□□□ 0.59
TUBB3-209ENST00000555609 NID2Q14112 1375 aa18.7■□□□□ 0.58
TUBB3-209ENST00000555609 CUTAO60888 179 aa18.7■□□□□ 0.58
TUBB3-209ENST00000555609 PDE8BO95263 885 aa18.7■□□□□ 0.58
TUBB3-209ENST00000555609 U2AF2P26368 475 aaKnown RBP eCLIP18.7■□□□□ 0.58
TUBB3-209ENST00000555609 TRIM29Q14134 588 aa18.7■□□□□ 0.58
TUBB3-209ENST00000555609 ERO1AQ96HE7 468 aa18.7■□□□□ 0.58
TUBB3-209ENST00000555609 FAM177BA6PVY3 158 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 ERVV-1B6SEH8 477 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 PDE8AO60658 829 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 NCAPHQ15003 741 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 KRT40Q6A162 431 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 APOA5Q6Q788 366 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 DNAJC10Q8IXB1 793 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 NBPF3Q9H094 633 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 CNNM2Q9H8M5 875 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 MROH5Q6ZUA9 1318 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 AKAP11Q9UKA4 1901 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 ZBTB43O43298 467 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 SFPQP23246 707 aaKnown RBP eCLIP18.69■□□□□ 0.58
TUBB3-209ENST00000555609 EVA1CP58658 441 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 ARID5BQ14865 1188 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 PTPAQ15257 358 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 RESP18Q5W5W9 173 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 VPS37DQ86XT2 251 aa18.69■□□□□ 0.58
TUBB3-209ENST00000555609 XPO4Q9C0E2 1151 aaKnown RBP18.69■□□□□ 0.58
TUBB3-209ENST00000555609 HOOK1Q9UJC3 728 aaKnown RBP18.69■□□□□ 0.58
TUBB3-209ENST00000555609 PATL2C9JE40 543 aaKnown RBP18.68■□□□□ 0.58
TUBB3-209ENST00000555609 SMC2O95347 1197 aa18.68■□□□□ 0.58
TUBB3-209ENST00000555609 IARSP41252 1262 aaKnown RBP18.68■□□□□ 0.58
TUBB3-209ENST00000555609 DMTNQ08495 405 aa18.68■□□□□ 0.58
TUBB3-209ENST00000555609 TBC1D10CQ8IV04 446 aa18.68■□□□□ 0.58
TUBB3-209ENST00000555609 IGDCC4Q8TDY8 1250 aa18.68■□□□□ 0.58
TUBB3-209ENST00000555609 LPIN2Q92539 896 aa18.68■□□□□ 0.58
TUBB3-209ENST00000555609 IFNKQ9P0W0 207 aa18.68■□□□□ 0.58
TUBB3-209ENST00000555609 TCRBV5S4A2TA0A5A2 114 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 NUTM2BA6NNL0 878 aaPredicted RBP18.67■□□□□ 0.58
TUBB3-209ENST00000555609 NUTM2EB1AL46 878 aaPredicted RBP18.67■□□□□ 0.58
TUBB3-209ENST00000555609 WDHD1O75717 1129 aaPredicted RBP18.67■□□□□ 0.58
TUBB3-209ENST00000555609 PDE6AP16499 860 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 RCAN1P53805 252 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 GNL2Q13823 731 aaKnown RBP18.67■□□□□ 0.58
TUBB3-209ENST00000555609 CYB5R4Q7L1T6 521 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 NUTM2AQ8IVF1 878 aaPredicted RBP18.67■□□□□ 0.58
TUBB3-209ENST00000555609 STRBPQ96SI9 672 aaKnown RBP18.67■□□□□ 0.58
TUBB3-209ENST00000555609 MAP3K14Q99558 947 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 GREM2Q9H772 168 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 PIH1D3Q9NQM4 214 aaKnown RBP18.67■□□□□ 0.58
TUBB3-209ENST00000555609 TOGARAM1Q9Y4F4 1720 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 ZNF532Q9HCE3 1301 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 IRS4O14654 1257 aaPredicted RBP18.67■□□□□ 0.58
TUBB3-209ENST00000555609 PPFIA3O75145 1194 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 PUM3Q15397 648 aaKnown RBP18.67■□□□□ 0.58
TUBB3-209ENST00000555609 NTRK3Q16288 839 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 CCDC102BQ68D86 513 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 PIGBQ92521 554 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 KRT23Q9C075 422 aa18.67■□□□□ 0.58
TUBB3-209ENST00000555609 USP27XA6NNY8 438 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 APPP05067 770 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 GNAT2P19087 354 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 FGFR2P21802 821 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 FANCCQ00597 558 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 MYL5Q02045 173 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 OLFM4Q6UX06 510 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 TMC6Q7Z403 805 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 ZNF592Q92610 1267 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 AIDAQ96BJ3 306 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 LY9Q9HBG7 655 aa18.66■□□□□ 0.58
TUBB3-209ENST00000555609 GOLGA8AA7E2F4 631 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 SLU7O95391 586 aaKnown RBP18.65■□□□□ 0.58
TUBB3-209ENST00000555609 ZSCAN20P17040 1043 aaPredicted RBP18.65■□□□□ 0.58
TUBB3-209ENST00000555609 CBX1P83916 185 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 SSRP1Q08945 709 aaKnown RBP18.65■□□□□ 0.58
TUBB3-209ENST00000555609 PI16Q6UXB8 463 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 ZNF397Q8NF99 534 aaPredicted RBP18.65■□□□□ 0.58
TUBB3-209ENST00000555609 GNL3Q9BVP2 549 aaKnown RBP eCLIP18.65■□□□□ 0.58
TUBB3-209ENST00000555609 IDH1O75874 414 aaKnown RBP18.65■□□□□ 0.58
TUBB3-209ENST00000555609 FMNL1O95466 1100 aaPredicted RBP18.65■□□□□ 0.58
TUBB3-209ENST00000555609 IFNAR1P17181 557 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 MAP3K12Q12852 859 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 TMEM67Q5HYA8 995 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 ARMCX5Q6P1M9 558 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 SHC4Q6S5L8 630 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 NFXL1Q6ZNB6 911 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 FCHSD1Q86WN1 690 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 TMTC2Q8N394 836 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 ERCC4Q92889 916 aaPredicted RBP18.65■□□□□ 0.58
TUBB3-209ENST00000555609 L2HGDHQ9H9P8 463 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 PRDM4Q9UKN5 801 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 ASAP1Q9ULH1 1129 aa18.65■□□□□ 0.58
TUBB3-209ENST00000555609 ZNF330Q9Y3S2 320 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms