RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ME1P48163 572 aa12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 RAD51AP2Q09MP3 1159 aa12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 TTF1Q15361 905 aaPredicted RBP12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 PIGBQ92521 554 aa12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 SDF4Q9BRK5 362 aa12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 LRRC2Q9BYS8 371 aa12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 EFCC1Q9HA90 598 aa12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 IFNKQ9P0W0 207 aa12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 FEZ2Q9UHY8 353 aaPredicted RBP12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 NHSL1Q5SYE7 1610 aa12.32□□□□□ -0.44
MTHFD1-210ENST00000555252 TUBB4BP68371 445 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 WASHC4Q2M389 1173 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 TRIM65Q6PJ69 517 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 IQUBQ8NA54 791 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 EXOC4Q96A65 974 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 AK7Q96M32 723 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 POLR3EQ9NVU0 708 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 LRP6O75581 1613 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 ANKRD18BA2A2Z9 1011 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 ZBTB22O15209 634 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 ADORA1P30542 326 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 METTL24Q5JXM2 366 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 CTR9Q6PD62 1173 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 NLRP10Q86W26 655 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 FAM89AQ96GI7 184 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 ASAP1Q9ULH1 1129 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 PCDHA7Q9UN72 937 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 RIPOR2Q9Y4F9 1068 aa12.31□□□□□ -0.44
MTHFD1-210ENST00000555252 ERVV-1B6SEH8 477 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 ARHGAP6O43182 974 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 BRAPQ7Z569 592 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 NCOA7Q8NI08 942 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 ZNF330Q9Y3S2 320 aaPredicted RBP12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 RIC1Q4ADV7 1423 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 SLC3A2P08195 630 aaKnown RBP12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 ZAP70P43403 619 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 CTSWP56202 376 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 CCT2P78371 535 aaKnown RBP12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 FANCCQ00597 558 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 NCAPHQ15003 741 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 CC2D1AQ6P1N0 951 aaPredicted RBP12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 LINC00301Q8NCQ3 95 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 TTLL11Q8NHH1 800 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 GOLGA5Q8TBA6 731 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 RABGGTAQ92696 567 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 PARP3Q9Y6F1 533 aa12.3□□□□□ -0.44
MTHFD1-210ENST00000555252 DISP2A7MBM2 1401 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 NEDD4P46934 1319 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 CARMIL3Q8ND23 1372 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 ZNF213O14771 459 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 TBC1D8O95759 1140 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 FGAP02671 866 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 UQCRFS1P1P0C7P4 283 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 CEBPZQ03701 1054 aaKnown RBP12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 DPCR1Q3MIW9 517 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 LDHAL6AQ6ZMR3 332 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 RALYLQ86SE5 291 aaKnown RBP12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 REXO1L1PQ8IX06 675 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 ARFGAP3Q9NP61 516 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 BCL9O00512 1426 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 ATRNO75882 1429 aa12.29□□□□□ -0.44
MTHFD1-210ENST00000555252 NPHP1O15259 732 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 PRC1O43663 620 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 PDE8AO60658 829 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 CYP19A1P11511 503 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 ITGA6P23229 1130 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 OAS2P29728 719 aaKnown RBP12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 MAP3K9P80192 1104 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 SMC1AQ14683 1233 aaKnown RBP12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 BRD3Q15059 726 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 TTLL5Q6EMB2 1281 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 RSRC2Q7L4I2 434 aaKnown RBP12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 MB21D2Q8IYB1 491 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 LRRN4CLQ8ND94 238 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 RASSF4Q9H2L5 321 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 CNNM1Q9NRU3 951 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 CCDC151A5D8V7 595 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 POTEB2H3BUK9 544 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 GPAA1O43292 621 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 URI1O94763 535 aaPredicted RBP12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 TUBB2AQ13885 445 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 STK38Q15208 465 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 UBE3CQ15386 1083 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 TUBB2BQ9BVA1 445 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 TUBE1Q9UJT0 475 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 C4AP0C0L4 1744 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 C4BP0C0L5 1744 aa12.28□□□□□ -0.44
MTHFD1-210ENST00000555252 COL14A1Q05707 1796 aaKnown RBP12.27□□□□□ -0.44
MTHFD1-210ENST00000555252 ANKRD36CQ5JPF3 1778 aa12.27□□□□□ -0.44
MTHFD1-210ENST00000555252 IRS4O14654 1257 aaPredicted RBP12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 FOXP2O15409 715 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 CMA1P23946 247 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 ADD2P35612 726 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 IL6STP40189 918 aaPredicted RBP12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 NDUFA8P51970 172 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 TRDNQ13061 729 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 SCARF1Q14162 830 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 SF3A1Q15459 793 aaKnown RBP12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 ZSCAN26Q16670 478 aa12.27□□□□□ -0.45
MTHFD1-210ENST00000555252 ILDR1Q86SU0 546 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms