RNA–Protein interactions for RNA: ENST00000555172.5

KTN1-220, Transcript of kinectin 1, humanhuman

TSL 2

Gene KTN1, Length 1,985 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-220ENST00000555172 USP48Q86UV5 1035 aa5.09□□□□□ -1.59
KTN1-220ENST00000555172 FAM35AQ86V20 835 aa5.09□□□□□ -1.59
KTN1-220ENST00000555172 TSR2Q969E8 191 aaKnown RBP5.09□□□□□ -1.59
KTN1-220ENST00000555172 KRTAP4-11Q9BYQ6 195 aa5.09□□□□□ -1.59
KTN1-220ENST00000555172 SPG7Q9UQ90 795 aa5.09□□□□□ -1.59
KTN1-220ENST00000555172 OPLAHO14841 1288 aa5.09□□□□□ -1.6
KTN1-220ENST00000555172 DEAF1O75398 565 aaPredicted RBP5.09□□□□□ -1.6
KTN1-220ENST00000555172 NFKB1P19838 968 aa5.09□□□□□ -1.6
KTN1-220ENST00000555172 ORC1Q13415 861 aa5.09□□□□□ -1.6
KTN1-220ENST00000555172 SOGA3Q5TF21 947 aa5.09□□□□□ -1.6
KTN1-220ENST00000555172 ZNF438Q7Z4V0 828 aa5.09□□□□□ -1.6
KTN1-220ENST00000555172 BTLAQ7Z6A9 289 aa5.09□□□□□ -1.6
KTN1-220ENST00000555172 GPATCH11Q8N954 259 aa5.09□□□□□ -1.6
KTN1-220ENST00000555172 GSX2Q9BZM3 304 aa5.09□□□□□ -1.6
KTN1-220ENST00000555172 UBAP1LF5GYI3 381 aa5.08□□□□□ -1.6
KTN1-220ENST00000555172 PRC1O43663 620 aa5.08□□□□□ -1.6
KTN1-220ENST00000555172 INPP5BP32019 993 aa5.08□□□□□ -1.6
KTN1-220ENST00000555172 MLLT1Q03111 559 aaPredicted RBP5.08□□□□□ -1.6
KTN1-220ENST00000555172 MAP9Q49MG5 647 aa5.08□□□□□ -1.6
KTN1-220ENST00000555172 CMTR1Q8N1G2 835 aaKnown RBP5.08□□□□□ -1.6
KTN1-220ENST00000555172 LPIN3Q9BQK8 851 aa5.08□□□□□ -1.6
KTN1-220ENST00000555172 SRA1Q9HD15 236 aaKnown RBP5.08□□□□□ -1.6
KTN1-220ENST00000555172 RTCBQ9Y3I0 505 aaKnown RBP5.08□□□□□ -1.6
KTN1-220ENST00000555172 CCDC189A1A4V9 331 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 A6NHS1 94 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 ZBTB42B2RXF5 422 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 TGFB1P01137 390 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 ATF4P18848 351 aaPredicted RBP5.07□□□□□ -1.6
KTN1-220ENST00000555172 PERM1Q5SV97 790 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 PDE12Q6L8Q7 609 aaKnown RBP5.07□□□□□ -1.6
KTN1-220ENST00000555172 XKR5Q6UX68 686 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 CCAR1Q8IX12 1150 aaKnown RBP5.07□□□□□ -1.6
KTN1-220ENST00000555172 SNX29Q8TEQ0 813 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 MAF1Q9H063 256 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 RPS6KL1Q9Y6S9 549 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 CCDC85CA6NKD9 419 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 TNFRSF21O75509 655 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 GP2P55259 537 aaKnown RBP5.07□□□□□ -1.6
KTN1-220ENST00000555172 IGF2-ASQ6U949 168 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 ZNF654Q8IZM8 581 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 PNMA5Q96PV4 448 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 SRPK1Q96SB4 655 aaKnown RBP5.07□□□□□ -1.6
KTN1-220ENST00000555172 GNL3LQ9NVN8 582 aaKnown RBP5.07□□□□□ -1.6
KTN1-220ENST00000555172 AK5Q9Y6K8 562 aa5.07□□□□□ -1.6
KTN1-220ENST00000555172 GIPC1O14908 333 aa5.06□□□□□ -1.6
KTN1-220ENST00000555172 PHACTR2O75167 634 aa5.06□□□□□ -1.6
KTN1-220ENST00000555172 EIF4BP23588 611 aaKnown RBP5.06□□□□□ -1.6
KTN1-220ENST00000555172 GRNP28799 593 aaKnown RBP5.06□□□□□ -1.6
KTN1-220ENST00000555172 KRT25Q7Z3Z0 450 aa5.06□□□□□ -1.6
KTN1-220ENST00000555172 DZIP1LQ8IYY4 767 aaKnown RBP5.06□□□□□ -1.6
KTN1-220ENST00000555172 KRTAP4-5Q9BYR2 181 aa5.06□□□□□ -1.6
KTN1-220ENST00000555172 FANCLQ9NW38 375 aa5.06□□□□□ -1.6
KTN1-220ENST00000555172 FAM221BA6H8Z2 402 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 KIF4AO95239 1232 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 PTMSP20962 102 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 PAK2Q13177 524 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 PLEKHG4Q58EX7 1191 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 HFE2Q6ZVN8 426 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 WFDC8Q8IUA0 241 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 WDR75Q8IWA0 830 aaKnown RBP5.05□□□□□ -1.6
KTN1-220ENST00000555172 CKAP2LQ8IYA6 745 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 CRELD1Q96HD1 420 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 ZNF408Q9H9D4 720 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 ELP3Q9H9T3 547 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 USP20Q9Y2K6 914 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 WDHD1O75717 1129 aaPredicted RBP5.05□□□□□ -1.6
KTN1-220ENST00000555172 GJA8P48165 433 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.05□□□□□ -1.6
KTN1-220ENST00000555172 CLEC4GQ6UXB4 293 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 AGGF1Q8N302 714 aaeCLIP5.05□□□□□ -1.64e-8■■■□□ 14.9
KTN1-220ENST00000555172 CCDC74AQ96AQ1 378 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 NAP1L5Q96NT1 182 aaPredicted RBP5.05□□□□□ -1.6
KTN1-220ENST00000555172 C12orf49Q9H741 205 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 AKTIPQ9H8T0 292 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 C11orf16Q9NQ32 467 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 SNTG2Q9NY99 539 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 ZFATQ9P243 1243 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 FOXD3Q9UJU5 478 aaPredicted RBP5.05□□□□□ -1.6
KTN1-220ENST00000555172 EID1Q9Y6B2 187 aa5.05□□□□□ -1.6
KTN1-220ENST00000555172 DLL1O00548 723 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 XYLBO75191 536 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 CDC45O75419 566 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 CCINQ13939 588 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 TRIP4Q15650 581 aaPredicted RBP5.04□□□□□ -1.6
KTN1-220ENST00000555172 FERMT3Q86UX7 667 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 DTWD1Q8N5C7 304 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 PRPF38AQ8NAV1 312 aaKnown RBP5.04□□□□□ -1.6
KTN1-220ENST00000555172 SH3TC2Q8TF17 1288 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 PMEPA1Q969W9 287 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 MPHOSPH6Q99547 160 aaKnown RBP5.04□□□□□ -1.6
KTN1-220ENST00000555172 FAM126AQ9BYI3 521 aaPredicted RBP5.04□□□□□ -1.6
KTN1-220ENST00000555172 ZFYVE28Q9HCC9 887 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 KCNMB2Q9Y691 235 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 MRVI1Q9Y6F6 885 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 TARSP26639 723 aaKnown RBP5.04□□□□□ -1.6
KTN1-220ENST00000555172 ELMSAN1Q6PJG2 1045 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 VPS37DQ86XT2 251 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 GGT7Q9UJ14 662 aa5.04□□□□□ -1.6
KTN1-220ENST00000555172 HCLS1P14317 486 aaPredicted RBP5.03□□□□□ -1.6
KTN1-220ENST00000555172 ZEB1P37275 1124 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms