RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 ATP6V0A2Q9Y487 856 aa10.54□□□□□ -0.72
TDP1-210ENST00000554976 SH2B2O14492 632 aaPredicted RBP10.53□□□□□ -0.72
TDP1-210ENST00000554976 PPEF1O14829 653 aaPredicted RBP10.53□□□□□ -0.72
TDP1-210ENST00000554976 DTNBO60941 627 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 PTMSP20962 102 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 DYNLL1P63167 89 aaKnown RBP10.53□□□□□ -0.72
TDP1-210ENST00000554976 GSE1Q14687 1217 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 IGDCC4Q8TDY8 1250 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 SMC3Q9UQE7 1217 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 ROBO3Q96MS0 1386 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 F13A1P00488 732 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 NPR1P16066 1061 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 GIMAP6Q6P9H5 292 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 CHST3Q7LGC8 479 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 MIGA1Q8NAN2 632 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 SLC4A4Q9Y6R1 1079 aa10.53□□□□□ -0.72
TDP1-210ENST00000554976 MYH6P13533 1939 aa10.52□□□□□ -0.72
TDP1-210ENST00000554976 MAGEB6P1A0A0J9YX57 407 aa10.52□□□□□ -0.72
TDP1-210ENST00000554976 PRC1O43663 620 aa10.52□□□□□ -0.72
TDP1-210ENST00000554976 MMP10P09238 476 aa10.52□□□□□ -0.72
TDP1-210ENST00000554976 MCM5P33992 734 aa10.52□□□□□ -0.72
TDP1-210ENST00000554976 INCENPQ9NQS7 918 aa10.52□□□□□ -0.72
TDP1-210ENST00000554976 FAM205AQ6ZU69 1335 aa10.52□□□□□ -0.73
TDP1-210ENST00000554976 SMIM22K7EJ46 135 aa10.52□□□□□ -0.73
TDP1-210ENST00000554976 JAK2O60674 1132 aa10.52□□□□□ -0.73
TDP1-210ENST00000554976 CTDSPL2Q05D32 466 aa10.52□□□□□ -0.73
TDP1-210ENST00000554976 GPT2Q8TD30 523 aa10.52□□□□□ -0.73
TDP1-210ENST00000554976 CD209Q9NNX6 404 aa10.52□□□□□ -0.73
TDP1-210ENST00000554976 ANKIB1Q9P2G1 1089 aa10.52□□□□□ -0.73
TDP1-210ENST00000554976 FDPSP14324 419 aaKnown RBP10.52□□□□□ -0.73
TDP1-210ENST00000554976 EN1Q05925 392 aaPredicted RBP10.52□□□□□ -0.73
TDP1-210ENST00000554976 MTA3Q9BTC8 594 aa10.52□□□□□ -0.73
TDP1-210ENST00000554976 LY9Q9HBG7 655 aa10.52□□□□□ -0.73
TDP1-210ENST00000554976 SENP2Q9HC62 589 aa10.52□□□□□ -0.73
TDP1-210ENST00000554976 FSD2A1L4K1 749 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 AKNAD1Q5T1N1 836 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 MCTP1Q6DN14 999 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 NAA16Q6N069 864 aaPredicted RBP10.51□□□□□ -0.73
TDP1-210ENST00000554976 ZNF804AQ7Z570 1209 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 SGMS1Q86VZ5 419 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 SDR42E1Q8WUS8 393 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 RAI14Q9P0K7 980 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 ABCF2Q9UG63 623 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 GGA1Q9UJY5 639 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.51□□□□□ -0.73
TDP1-210ENST00000554976 MYH8P13535 1937 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 UFL1O94874 794 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 PDIA4P13667 645 aaKnown RBP10.51□□□□□ -0.73
TDP1-210ENST00000554976 PPARAQ07869 468 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 STK3Q13188 491 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 KLHL40Q2TBA0 621 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 CDC37L1Q7L3B6 337 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 RGS22Q8NE09 1264 aa10.51□□□□□ -0.73
TDP1-210ENST00000554976 FER1L6Q2WGJ9 1857 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 PDE6BP35913 854 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 EVX2Q03828 476 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 STYK1Q6J9G0 422 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 CTR9Q6PD62 1173 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 VPS37DQ86XT2 251 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 WDR66Q8TBY9 1149 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 C7orf43Q8WVR3 580 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 MASTLQ96GX5 879 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 RTFDC1Q9BY42 306 aaPredicted RBP10.5□□□□□ -0.73
TDP1-210ENST00000554976 NAPBQ9H115 298 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 FAM217BQ9NTX9 383 aaPredicted RBP10.5□□□□□ -0.73
TDP1-210ENST00000554976 COL4A5P29400 1685 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 GAKO14976 1311 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 B4E1Z4 1266 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 NPHP1O15259 732 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 PPP4CP60510 307 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 SKOR2Q2VWA4 1001 aaPredicted RBP10.5□□□□□ -0.73
TDP1-210ENST00000554976 SBK1Q52WX2 424 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 TMEM87BQ96K49 555 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 ZSWIM5Q9P217 1185 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 NSFL1CQ9UNZ2 370 aaKnown RBP10.5□□□□□ -0.73
TDP1-210ENST00000554976 PARP3Q9Y6F1 533 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 LIFRP42702 1097 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 RESTQ13127 1097 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 SEC23AQ15436 765 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 OLFM4Q6UX06 510 aa10.5□□□□□ -0.73
TDP1-210ENST00000554976 MSL1Q68DK7 614 aa10.49□□□□□ -0.73
TDP1-210ENST00000554976 CNNM2Q9H8M5 875 aa10.49□□□□□ -0.73
TDP1-210ENST00000554976 NCOA5Q9HCD5 579 aaKnown RBP10.49□□□□□ -0.73
TDP1-210ENST00000554976 DCP1AQ9NPI6 582 aaPredicted RBP10.49□□□□□ -0.73
TDP1-210ENST00000554976 ANGEL1Q9UNK9 670 aaKnown RBP10.49□□□□□ -0.73
TDP1-210ENST00000554976 MROH7-TTC4A0A0A0MT08 1334 aa10.49□□□□□ -0.73
TDP1-210ENST00000554976 PTPDC1A2A3K4 754 aa10.49□□□□□ -0.73
TDP1-210ENST00000554976 NTRK3Q16288 839 aa10.49□□□□□ -0.73
TDP1-210ENST00000554976 SPTY2D1Q68D10 685 aaPredicted RBP10.49□□□□□ -0.73
TDP1-210ENST00000554976 FAM163AQ96GL9 167 aaPredicted RBP10.49□□□□□ -0.73
TDP1-210ENST00000554976 ALDH1B1P30837 517 aa10.48□□□□□ -0.73
TDP1-210ENST00000554976 NACAP1Q9BZK3 213 aa10.48□□□□□ -0.73
TDP1-210ENST00000554976 PDGFDQ9GZP0 370 aaPredicted RBP10.48□□□□□ -0.73
TDP1-210ENST00000554976 APPP05067 770 aa10.48□□□□□ -0.73
TDP1-210ENST00000554976 ADD1P35611 737 aaKnown RBP10.48□□□□□ -0.73
TDP1-210ENST00000554976 FOXD4L5Q5VV16 416 aaPredicted RBP10.48□□□□□ -0.73
TDP1-210ENST00000554976 APOA5Q6Q788 366 aa10.48□□□□□ -0.73
TDP1-210ENST00000554976 ILDR1Q86SU0 546 aaPredicted RBP10.48□□□□□ -0.73
TDP1-210ENST00000554976 FOXD4L4Q8WXT5 416 aaPredicted RBP10.48□□□□□ -0.73
TDP1-210ENST00000554976 KRT23Q9C075 422 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms