RNA–Protein interactions for RNA: ENST00000554971.6

SHOX-204, Transcript of short stature homeobox, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHOX, Length 1,902 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-204ENST00000554971 MECOMQ03112 1051 aa20.73■□□□□ 0.91
SHOX-204ENST00000554971 OGFOD1Q8N543 542 aa20.73■□□□□ 0.91
SHOX-204ENST00000554971 NSUN4Q96CB9 384 aaKnown RBP20.73■□□□□ 0.91
SHOX-204ENST00000554971 ADARB2Q9NS39 739 aaKnown RBP20.73■□□□□ 0.91
SHOX-204ENST00000554971 CHGBP05060 677 aa20.72■□□□□ 0.91
SHOX-204ENST00000554971 ZBED3Q96IU2 234 aaPredicted RBP20.72■□□□□ 0.91
SHOX-204ENST00000554971 H7C1D1 291 aa20.72■□□□□ 0.91
SHOX-204ENST00000554971 KIF3CO14782 793 aa20.72■□□□□ 0.91
SHOX-204ENST00000554971 FAM43AQ8N2R8 423 aa20.72■□□□□ 0.91
SHOX-204ENST00000554971 RILPL2Q969X0 211 aa20.72■□□□□ 0.91
SHOX-204ENST00000554971 LRP2BPQ9P2M1 347 aa20.72■□□□□ 0.91
SHOX-204ENST00000554971 BAG4O95429 457 aaKnown RBP20.71■□□□□ 0.91
SHOX-204ENST00000554971 NBPF9Q3BBW0 867 aa20.71■□□□□ 0.91
SHOX-204ENST00000554971 RBM26Q5T8P6 1007 aaKnown RBP20.71■□□□□ 0.91
SHOX-204ENST00000554971 SERPINA10Q9UK55 444 aa20.71■□□□□ 0.91
SHOX-204ENST00000554971 ASTN2O75129 1339 aaPredicted RBP20.71■□□□□ 0.91
SHOX-204ENST00000554971 WNT10BO00744 389 aa20.7■□□□□ 0.91
SHOX-204ENST00000554971 IDH1O75874 414 aaKnown RBP20.7■□□□□ 0.91
SHOX-204ENST00000554971 XRCC6P12956 609 aaKnown RBP eCLIP20.7■□□□□ 0.91
SHOX-204ENST00000554971 CRKP46108 304 aa20.7■□□□□ 0.91
SHOX-204ENST00000554971 CFAP100Q494V2 611 aa20.7■□□□□ 0.91
SHOX-204ENST00000554971 SPTY2D1Q68D10 685 aaPredicted RBP20.7■□□□□ 0.91
SHOX-204ENST00000554971 ADGRA1Q86SQ6 560 aa20.7■□□□□ 0.91
SHOX-204ENST00000554971 INTS4Q96HW7 963 aaKnown RBP20.7■□□□□ 0.91
SHOX-204ENST00000554971 RAI14Q9P0K7 980 aa20.7■□□□□ 0.91
SHOX-204ENST00000554971 KLHL40Q2TBA0 621 aa20.7■□□□□ 0.9
SHOX-204ENST00000554971 KIF4BQ2VIQ3 1234 aa20.7■□□□□ 0.9
SHOX-204ENST00000554971 SLFNL1Q499Z3 407 aa20.7■□□□□ 0.9
SHOX-204ENST00000554971 MTMR14Q8NCE2 650 aa20.7■□□□□ 0.9
SHOX-204ENST00000554971 PRMT6Q96LA8 375 aaPredicted RBP20.7■□□□□ 0.9
SHOX-204ENST00000554971 FOXD4L1Q9NU39 408 aa20.7■□□□□ 0.9
SHOX-204ENST00000554971 HDAC9Q9UKV0 1011 aa20.7■□□□□ 0.9
SHOX-204ENST00000554971 CDK5RAP2Q96SN8 1893 aa20.7■□□□□ 0.9
SHOX-204ENST00000554971 SPDYE2BA6NHP3 402 aa20.69■□□□□ 0.9
SHOX-204ENST00000554971 SPDYE6P0CI01 402 aa20.69■□□□□ 0.9
SHOX-204ENST00000554971 HDLBPQ00341 1268 aaKnown RBP20.69■□□□□ 0.9
SHOX-204ENST00000554971 TTF1Q15361 905 aaPredicted RBP20.69■□□□□ 0.9
SHOX-204ENST00000554971 DZIP1Q86YF9 867 aaKnown RBP20.69■□□□□ 0.9
SHOX-204ENST00000554971 CNTROBQ8N137 903 aa20.69■□□□□ 0.9
SHOX-204ENST00000554971 MRIQ9BWK5 157 aa20.69■□□□□ 0.9
SHOX-204ENST00000554971 GZF1Q9H116 711 aaPredicted RBP20.69■□□□□ 0.9
SHOX-204ENST00000554971 DAGLAQ9Y4D2 1042 aa20.69■□□□□ 0.9
SHOX-204ENST00000554971 MMP14P50281 582 aa20.68■□□□□ 0.9
SHOX-204ENST00000554971 NEK4P51957 841 aa20.68■□□□□ 0.9
SHOX-204ENST00000554971 CUL4AQ13619 759 aa20.68■□□□□ 0.9
SHOX-204ENST00000554971 APOBEC3HQ6NTF7 200 aaKnown RBP20.68■□□□□ 0.9
SHOX-204ENST00000554971 HHIPL2Q6UWX4 724 aa20.68■□□□□ 0.9
SHOX-204ENST00000554971 USP50Q70EL3 339 aaPredicted RBP20.68■□□□□ 0.9
SHOX-204ENST00000554971 TEKT1Q969V4 418 aa20.68■□□□□ 0.9
SHOX-204ENST00000554971 GAKO14976 1311 aa20.68■□□□□ 0.9
SHOX-204ENST00000554971 MAST3O60307 1309 aa20.68■□□□□ 0.9
SHOX-204ENST00000554971 KBTBD3Q8NAB2 608 aa20.68■□□□□ 0.9
SHOX-204ENST00000554971 ZDHHC15Q96MV8 337 aa20.68■□□□□ 0.9
SHOX-204ENST00000554971 ANO2Q9NQ90 1003 aa20.68■□□□□ 0.9
SHOX-204ENST00000554971 EAPPQ56P03 285 aaPredicted RBP20.67■□□□□ 0.9
SHOX-204ENST00000554971 FAM163AQ96GL9 167 aaPredicted RBP20.67■□□□□ 0.9
SHOX-204ENST00000554971 TCRBV5S4A2TA0A5A2 114 aa20.66■□□□□ 0.9
SHOX-204ENST00000554971 DLGAP5Q15398 846 aa20.66■□□□□ 0.9
SHOX-204ENST00000554971 PNMA8AQ86V59 439 aaPredicted RBP20.66■□□□□ 0.9
SHOX-204ENST00000554971 MAGEB6Q8N7X4 407 aa20.66■□□□□ 0.9
SHOX-204ENST00000554971 MROH7-TTC4A0A0A0MT08 1334 aa20.66■□□□□ 0.9
SHOX-204ENST00000554971 PDE6AP16499 860 aa20.66■□□□□ 0.9
SHOX-204ENST00000554971 HSPA4P34932 840 aa20.66■□□□□ 0.9
SHOX-204ENST00000554971 RBM5P52756 815 aaKnown RBP eCLIP20.66■□□□□ 0.9
SHOX-204ENST00000554971 MAP3K12Q12852 859 aa20.66■□□□□ 0.9
SHOX-204ENST00000554971 SLC9C2Q5TAH2 1124 aa20.66■□□□□ 0.9
SHOX-204ENST00000554971 GRPEL1Q9HAV7 217 aa20.66■□□□□ 0.9
SHOX-204ENST00000554971 NAA16Q6N069 864 aaPredicted RBP20.65■□□□□ 0.9
SHOX-204ENST00000554971 RUFY2Q8WXA3 655 aa20.65■□□□□ 0.9
SHOX-204ENST00000554971 TMX3Q96JJ7 454 aa20.65■□□□□ 0.9
SHOX-204ENST00000554971 PGAP2Q9UHJ9 254 aa20.65■□□□□ 0.9
SHOX-204ENST00000554971 SCAF8Q9UPN6 1271 aaKnown RBP20.65■□□□□ 0.9
SHOX-204ENST00000554971 SGSM2O43147 1006 aa20.64■□□□□ 0.89
SHOX-204ENST00000554971 ADD2P35612 726 aa20.64■□□□□ 0.89
SHOX-204ENST00000554971 TDRD3Q9H7E2 651 aaKnown RBP20.64■□□□□ 0.89
SHOX-204ENST00000554971 FOCADQ5VW36 1801 aa20.64■□□□□ 0.89
SHOX-204ENST00000554971 ZNF532Q9HCE3 1301 aa20.64■□□□□ 0.89
SHOX-204ENST00000554971 GPR75-ASB3A0A0A6YYF3 556 aa20.63■□□□□ 0.89
SHOX-204ENST00000554971 EVI5LQ96CN4 794 aa20.63■□□□□ 0.89
SHOX-204ENST00000554971 GGA3Q9NZ52 723 aa20.63■□□□□ 0.89
SHOX-204ENST00000554971 CLRN2A0PK11 232 aa20.63■□□□□ 0.89
SHOX-204ENST00000554971 IGSF3O75054 1194 aa20.63■□□□□ 0.89
SHOX-204ENST00000554971 CYP7A1P22680 504 aa20.63■□□□□ 0.89
SHOX-204ENST00000554971 ANGEL2Q5VTE6 544 aaKnown RBP20.63■□□□□ 0.89
SHOX-204ENST00000554971 BTDP43251 543 aa20.62■□□□□ 0.89
SHOX-204ENST00000554971 RHBDL3P58872 404 aa20.62■□□□□ 0.89
SHOX-204ENST00000554971 GSTO1P78417 241 aa20.62■□□□□ 0.89
SHOX-204ENST00000554971 SPDYE2Q495Y8 402 aa20.62■□□□□ 0.89
SHOX-204ENST00000554971 CDC42EP5Q6NZY7 148 aa20.62■□□□□ 0.89
SHOX-204ENST00000554971 LDHDQ86WU2 507 aa20.62■□□□□ 0.89
SHOX-204ENST00000554971 ZC3H15Q8WU90 426 aaKnown RBP20.62■□□□□ 0.89
SHOX-204ENST00000554971 DDX49Q9Y6V7 483 aaKnown RBP20.62■□□□□ 0.89
SHOX-204ENST00000554971 RAD50Q92878 1312 aa20.62■□□□□ 0.89
SHOX-204ENST00000554971 CACNB3P54284 484 aa20.61■□□□□ 0.89
SHOX-204ENST00000554971 KIAA1211Q6ZU35 1233 aa20.61■□□□□ 0.89
SHOX-204ENST00000554971 MIGA1Q8NAN2 632 aa20.61■□□□□ 0.89
SHOX-204ENST00000554971 FSD1Q9BTV5 496 aa20.61■□□□□ 0.89
SHOX-204ENST00000554971 AATFQ9NY61 560 aaKnown RBP eCLIP20.61■□□□□ 0.89
SHOX-204ENST00000554971 UBE3CQ15386 1083 aa20.61■□□□□ 0.89
SHOX-204ENST00000554971 MAP1SQ66K74 1059 aaPredicted RBP20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms