RNA–Protein interactions for RNA: ENST00000554808.1

LINC01397-201, Transcript of long intergenic non-protein coding RNA 1397, humanhuman

TSL 4 BASIC

Gene LINC01397, Length 579 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01397-201ENST00000554808 RUFY2Q8WXA3 655 aa9.72□□□□□ -0.85
LINC01397-201ENST00000554808 RILPL2Q969X0 211 aa9.72□□□□□ -0.85
LINC01397-201ENST00000554808 TAF1DQ9H5J8 278 aaPredicted RBP9.72□□□□□ -0.85
LINC01397-201ENST00000554808 ANTXR1Q9H6X2 564 aa9.72□□□□□ -0.85
LINC01397-201ENST00000554808 RRAGCQ9HB90 399 aa9.72□□□□□ -0.85
LINC01397-201ENST00000554808 PIH1D3Q9NQM4 214 aaKnown RBP9.72□□□□□ -0.85
LINC01397-201ENST00000554808 DAGLAQ9Y4D2 1042 aa9.72□□□□□ -0.85
LINC01397-201ENST00000554808 SIPA1L1O43166 1804 aa9.72□□□□□ -0.85
LINC01397-201ENST00000554808 COL2A1P02458 1487 aaPredicted RBP9.72□□□□□ -0.85
LINC01397-201ENST00000554808 DOCK1Q14185 1865 aa9.71□□□□□ -0.85
LINC01397-201ENST00000554808 GPR75-ASB3A0A0A6YYF3 556 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 WNT10BO00744 389 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 PDE6AP16499 860 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 CYP7A1P22680 504 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 EPS15P42566 896 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 TNNI2P48788 182 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 RGS3P49796 1198 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 FKBP1CQ5VVH2 108 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 CASC1Q6TDU7 716 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 LDHDQ86WU2 507 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 SMC1BQ8NDV3 1235 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 APPBP2Q92624 585 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 ZBED3Q96IU2 234 aaPredicted RBP9.71□□□□□ -0.86
LINC01397-201ENST00000554808 MXD3Q9BW11 206 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 NDUFB9Q9Y6M9 179 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 OTOFQ9HC10 1997 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 RAD50Q92878 1312 aa9.71□□□□□ -0.86
LINC01397-201ENST00000554808 RPAP1Q9BWH6 1393 aaPredicted RBP9.71□□□□□ -0.86
LINC01397-201ENST00000554808 MYH4Q9Y623 1939 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 POTECB2RU33 542 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 RNF113AO15541 343 aaKnown RBP9.7□□□□□ -0.86
LINC01397-201ENST00000554808 NPM3O75607 178 aaKnown RBP9.7□□□□□ -0.86
LINC01397-201ENST00000554808 CAPN15O75808 1086 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 GSPT1P15170 499 aaKnown RBP9.7□□□□□ -0.86
LINC01397-201ENST00000554808 GNAT2P19087 354 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 SDSP20132 328 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 PPP4CP60510 307 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 DIXDC1Q155Q3 683 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 SPDYE2Q495Y8 402 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 TBC1D10BQ4KMP7 808 aaPredicted RBP9.7□□□□□ -0.86
LINC01397-201ENST00000554808 SAMD7Q7Z3H4 446 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 AIDAQ96BJ3 306 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 DCPSQ96C86 337 aaKnown RBP9.7□□□□□ -0.86
LINC01397-201ENST00000554808 EDC3Q96F86 508 aaKnown RBP9.7□□□□□ -0.86
LINC01397-201ENST00000554808 HELLSQ9NRZ9 838 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 DIAPH3Q9NSV4 1193 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 PGAP2Q9UHJ9 254 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 PPP2R3BQ9Y5P8 575 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 ZNF532Q9HCE3 1301 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 PAPPA2Q9BXP8 1791 aa9.7□□□□□ -0.86
LINC01397-201ENST00000554808 TCRBV5S4A2TA0A5A2 114 aa9.69□□□□□ -0.86
LINC01397-201ENST00000554808 BTDP43251 543 aa9.69□□□□□ -0.86
LINC01397-201ENST00000554808 GRIK5Q16478 980 aa9.69□□□□□ -0.86
LINC01397-201ENST00000554808 APOBEC3HQ6NTF7 200 aaKnown RBP9.69□□□□□ -0.86
LINC01397-201ENST00000554808 FAM83AQ86UY5 434 aa9.69□□□□□ -0.86
LINC01397-201ENST00000554808 TNS4Q8IZW8 715 aa9.69□□□□□ -0.86
LINC01397-201ENST00000554808 TRPM4Q8TD43 1214 aa9.69□□□□□ -0.86
LINC01397-201ENST00000554808 HOOK2Q96ED9 719 aa9.69□□□□□ -0.86
LINC01397-201ENST00000554808 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
LINC01397-201ENST00000554808 CRNKL1Q9BZJ0 848 aaKnown RBP9.69□□□□□ -0.86
LINC01397-201ENST00000554808 TAOK2Q9UL54 1235 aa9.69□□□□□ -0.86
LINC01397-201ENST00000554808 PTPRFP10586 1907 aa9.68□□□□□ -0.86
LINC01397-201ENST00000554808 MAGEB6P1A0A0J9YX57 407 aa9.68□□□□□ -0.86
LINC01397-201ENST00000554808 HSPA1AP0DMV8 641 aaKnown RBP9.68□□□□□ -0.86
LINC01397-201ENST00000554808 HSPA1BP0DMV9 641 aaKnown RBP9.68□□□□□ -0.86
LINC01397-201ENST00000554808 NBPF9Q3BBW0 867 aa9.68□□□□□ -0.86
LINC01397-201ENST00000554808 EAPPQ56P03 285 aaPredicted RBP9.68□□□□□ -0.86
LINC01397-201ENST00000554808 ZMYM1Q5SVZ6 1142 aa9.68□□□□□ -0.86
LINC01397-201ENST00000554808 GIMAP6Q6P9H5 292 aa9.68□□□□□ -0.86
LINC01397-201ENST00000554808 SULF1Q8IWU6 871 aa9.68□□□□□ -0.86
LINC01397-201ENST00000554808 ZNF384Q8TF68 577 aa9.68□□□□□ -0.86
LINC01397-201ENST00000554808 PRMT6Q96LA8 375 aaPredicted RBP9.68□□□□□ -0.86
LINC01397-201ENST00000554808 IDI2Q9BXS1 227 aa9.68□□□□□ -0.86
LINC01397-201ENST00000554808 ATP8A2Q9NTI2 1148 aa9.68□□□□□ -0.86
LINC01397-201ENST00000554808 AATFQ9NY61 560 aaKnown RBP eCLIP9.68□□□□□ -0.86
LINC01397-201ENST00000554808 GGA3Q9NZ52 723 aa9.68□□□□□ -0.86
LINC01397-201ENST00000554808 THSD7BQ9C0I4 1608 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 SHTN1A0MZ66 631 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 ENTPD3O75355 529 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 CDC45O75419 566 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 MCMDC2Q4G0Z9 681 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 RBM26Q5T8P6 1007 aaKnown RBP9.67□□□□□ -0.86
LINC01397-201ENST00000554808 CHADLQ6NUI6 762 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 CDC42EP5Q6NZY7 148 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 CDC37L1Q7L3B6 337 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 AMOTL1Q8IY63 956 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 TEX11Q8IYF3 940 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 RIOK1Q9BRS2 568 aaKnown RBP9.67□□□□□ -0.86
LINC01397-201ENST00000554808 DHX36Q9H2U1 1008 aaKnown RBP9.67□□□□□ -0.86
LINC01397-201ENST00000554808 TDRD3Q9H7E2 651 aaKnown RBP9.67□□□□□ -0.86
LINC01397-201ENST00000554808 USP40Q9NVE5 1235 aa9.67□□□□□ -0.86
LINC01397-201ENST00000554808 ZNF70Q9UC06 446 aaPredicted RBP9.67□□□□□ -0.86
LINC01397-201ENST00000554808 GREB1LQ9C091 1923 aaPredicted RBP9.66□□□□□ -0.86
LINC01397-201ENST00000554808 ATRNL1Q5VV63 1379 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 PHIPQ8WWQ0 1821 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 ZMYM6O95789 1325 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 CCDC171Q6TFL3 1326 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 GPAA1O43292 621 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 EGFRP00533 1210 aa9.66□□□□□ -0.86
LINC01397-201ENST00000554808 NF2P35240 595 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms