RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 DYNC1LI2O43237 492 aaPredicted RBP2.69□□□□□ -1.98
PRPF39-208ENST00000554785 F13BP05160 661 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 PDE3BQ13370 1112 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 CITED4Q96RK1 184 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 SETDB2Q96T68 719 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 RBCK1Q9BYM8 510 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 CYP4F12Q9HCS2 524 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 FAM105AQ9NUU6 356 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 JAG2Q9Y219 1238 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 ACTL7BQ9Y614 415 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 NCANO14594 1321 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 TMEM238LA0A1B0GVL6 79 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 PRRG2O14669 202 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 GAS2O43903 313 aaKnown RBP2.69□□□□□ -1.98
PRPF39-208ENST00000554785 NFICP08651 508 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 ADH5P11766 374 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 RXRBP28702 533 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 DSC3Q14574 896 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 POU4F3Q15319 338 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 KRTAP19-4Q3LI73 84 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 AKAP4Q5JQC9 854 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 GATA6Q92908 595 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 ALKBH8Q96BT7 664 aaKnown RBP2.69□□□□□ -1.98
PRPF39-208ENST00000554785 CSRNP1Q96S65 589 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 ZC3H12CQ9C0D7 883 aaKnown RBP2.69□□□□□ -1.98
PRPF39-208ENST00000554785 PPP1R9AQ9ULJ8 1098 aa2.69□□□□□ -1.98
PRPF39-208ENST00000554785 FAM95CA0A1B0GW59 222 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 GADD45BO75293 160 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 CYP11A1P05108 521 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 NFKBIBQ15653 356 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 AGBL5Q8NDL9 886 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 STK35Q8TDR2 534 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 WDR18Q9BV38 432 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 DNAJC25Q9H1X3 360 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 SEMA6CQ9H3T2 930 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 LGR6Q9HBX8 967 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 BIN2Q9UBW5 565 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 ANGEL1Q9UNK9 670 aaKnown RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 FAM170BA6NMN3 283 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 AOC2O75106 756 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 PRNPP04156 253 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 LIG1P18858 919 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 USP11P51784 963 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 FCGRTP55899 365 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 PRPF40BQ6NWY9 871 aaKnown RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 NXPE4Q6UWF7 544 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 MPRIPQ6WCQ1 1025 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 NFXL1Q6ZNB6 911 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 EZH1Q92800 747 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 DMRTB1Q96MA1 342 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 METTL22Q9BUU2 404 aaPredicted RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 CCDC86Q9H6F5 360 aaKnown RBP2.68□□□□□ -1.98
PRPF39-208ENST00000554785 WWC3Q9ULE0 1092 aa2.68□□□□□ -1.98
PRPF39-208ENST00000554785 TREHO43280 583 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 ZNF862O60290 1169 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 RAB6AP20340 208 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 PTPN12Q05209 780 aaKnown RBP2.67□□□□□ -1.98
PRPF39-208ENST00000554785 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.67□□□□□ -1.982e-18■■■■■ 41.1
PRPF39-208ENST00000554785 TMCO4Q5TGY1 634 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 SEZ6L2Q6UXD5 910 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 DYMQ7RTS9 669 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 VSIG10LQ86VR7 867 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 CORO1BQ9BR76 489 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 BCO2Q9BYV7 579 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 GSX1Q9H4S2 264 aaPredicted RBP2.67□□□□□ -1.98
PRPF39-208ENST00000554785 ACSS3Q9H6R3 686 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 C1GALT1Q9NS00 363 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 ATG3Q9NT62 314 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 PIM2Q9P1W9 311 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 PRKAG2Q9UGJ0 569 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 DCTN4Q9UJW0 460 aa2.67□□□□□ -1.98
PRPF39-208ENST00000554785 CCDC9Q9Y3X0 531 aaKnown RBP2.67□□□□□ -1.98
PRPF39-208ENST00000554785 PNMA6FA0A0J9YX94 578 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 BIN1O00499 593 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 NEFLP07196 543 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 MAPK1P28482 360 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 MSMPQ1L6U9 139 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 SND1Q7KZF4 910 aaKnown RBP eCLIP2.66□□□□□ -1.98
PRPF39-208ENST00000554785 ZNF765Q7L2R6 523 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 PDZD3Q86UT5 571 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 C3orf58Q8NDZ4 430 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 TBC1D32Q96NH3 1257 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 OSBPL7Q9BZF2 842 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 AP4E1Q9UPM8 1137 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 PCDHGC5Q9Y5F6 944 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 TMPRSS2O15393 492 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 C8AP07357 584 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 ITGB5P18084 799 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 ASPAP45381 313 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 PDE3AQ14432 1141 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 COL19A1Q14993 1142 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 ENOX2Q16206 610 aaKnown RBP2.66□□□□□ -1.98
PRPF39-208ENST00000554785 OGFOD2Q6N063 350 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 DTHD1Q6ZMT9 781 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 CBLL1Q75N03 491 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 ZAR1Q86SH2 424 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 RAD18Q9NS91 495 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 LEMD3Q9Y2U8 911 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 DAGLAQ9Y4D2 1042 aa2.66□□□□□ -1.98
PRPF39-208ENST00000554785 U3KQE9 123 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms