RNA–Protein interactions for RNA: ENST00000554756.1

RIPK3-204, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,758 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-204ENST00000554756 PRAMEF18Q5VWM3 479 aa14.67□□□□□ -0.06
RIPK3-204ENST00000554756 NAA16Q6N069 864 aaPredicted RBP14.67□□□□□ -0.06
RIPK3-204ENST00000554756 SLF2Q8IX21 1173 aa14.67□□□□□ -0.06
RIPK3-204ENST00000554756 PASKQ96RG2 1323 aa14.67□□□□□ -0.06
RIPK3-204ENST00000554756 PITPNM2Q9BZ72 1349 aa14.67□□□□□ -0.06
RIPK3-204ENST00000554756 TCP10L2B9ZVM9 353 aa14.66□□□□□ -0.06
RIPK3-204ENST00000554756 LDHCP07864 332 aa14.66□□□□□ -0.06
RIPK3-204ENST00000554756 TTF1Q15361 905 aaPredicted RBP14.66□□□□□ -0.06
RIPK3-204ENST00000554756 APOBEC3FQ8IUX4 373 aaKnown RBP14.66□□□□□ -0.06
RIPK3-204ENST00000554756 USP40Q9NVE5 1235 aa14.66□□□□□ -0.06
RIPK3-204ENST00000554756 MROH7-TTC4A0A0A0MT08 1334 aa14.66□□□□□ -0.06
RIPK3-204ENST00000554756 GAKO14976 1311 aa14.66□□□□□ -0.06
RIPK3-204ENST00000554756 TTC41PQ6P2S7 1318 aa14.66□□□□□ -0.06
RIPK3-204ENST00000554756 CYP7A1P22680 504 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 BTDP43251 543 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 MAP3K12Q12852 859 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 CDC42EP5Q6NZY7 148 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 MAGEB6Q8N7X4 407 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 PI4K2BQ8TCG2 481 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 CDCA5Q96FF9 252 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 FAM163AQ96GL9 167 aaPredicted RBP14.65□□□□□ -0.06
RIPK3-204ENST00000554756 SALL3Q9BXA9 1300 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 ERC2O15083 957 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 APLP1P51693 650 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 PDE1AP54750 535 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 HTRA3P83110 453 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 TMOD2Q9NZR1 351 aa14.65□□□□□ -0.06
RIPK3-204ENST00000554756 AKAP11Q9UKA4 1901 aa14.64□□□□□ -0.07
RIPK3-204ENST00000554756 GLRX3O76003 335 aaKnown RBP14.64□□□□□ -0.07
RIPK3-204ENST00000554756 CELF2O95319 508 aaKnown RBP14.64□□□□□ -0.07
RIPK3-204ENST00000554756 RASA3Q14644 834 aa14.64□□□□□ -0.07
RIPK3-204ENST00000554756 ADGRA1Q86SQ6 560 aa14.64□□□□□ -0.07
RIPK3-204ENST00000554756 C22orf23Q9BZE7 217 aa14.64□□□□□ -0.07
RIPK3-204ENST00000554756 DEFB129Q9H1M3 183 aa14.64□□□□□ -0.07
RIPK3-204ENST00000554756 STAP2Q9UGK3 403 aa14.64□□□□□ -0.07
RIPK3-204ENST00000554756 GPR75-ASB3A0A0A6YYF3 556 aa14.63□□□□□ -0.07
RIPK3-204ENST00000554756 NBR1Q14596 966 aa14.63□□□□□ -0.07
RIPK3-204ENST00000554756 CST9Q5W186 159 aa14.63□□□□□ -0.07
RIPK3-204ENST00000554756 NOL10Q9BSC4 688 aaKnown RBP14.63□□□□□ -0.07
RIPK3-204ENST00000554756 PDE6AP16499 860 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 RBM25P49756 843 aaKnown RBP14.62□□□□□ -0.07
RIPK3-204ENST00000554756 SLFNL1Q499Z3 407 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 SLC9C2Q5TAH2 1124 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 PLEKHM2Q8IWE5 1019 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 MIGA1Q8NAN2 632 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 AATFQ9NY61 560 aaKnown RBP eCLIP14.62□□□□□ -0.07
RIPK3-204ENST00000554756 ZNF532Q9HCE3 1301 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 TMEM88BA6NKF7 163 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 CHGBP05060 677 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 TNNI2P48788 182 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 DYNLL1P63167 89 aaKnown RBP14.62□□□□□ -0.07
RIPK3-204ENST00000554756 TCP10Q12799 353 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 NFIAQ12857 509 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 TNFAIP1Q13829 316 aa14.62□□□□□ -0.07
RIPK3-204ENST00000554756 IGSF3O75054 1194 aa14.61□□□□□ -0.07
RIPK3-204ENST00000554756 BAG3O95817 575 aa14.61□□□□□ -0.07
RIPK3-204ENST00000554756 RHBDL3P58872 404 aa14.61□□□□□ -0.07
RIPK3-204ENST00000554756 SH3RF3Q8TEJ3 882 aaPredicted RBP14.61□□□□□ -0.07
RIPK3-204ENST00000554756 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.61□□□□□ -0.07
RIPK3-204ENST00000554756 TMEM39BQ9GZU3 492 aa14.61□□□□□ -0.07
RIPK3-204ENST00000554756 CNTNAP1P78357 1384 aa14.61□□□□□ -0.07
RIPK3-204ENST00000554756 CEP350Q5VT06 3117 aa14.61□□□□□ -0.07
RIPK3-204ENST00000554756 PICALMQ13492 652 aa14.6□□□□□ -0.07
RIPK3-204ENST00000554756 PRKG1Q13976 671 aa14.6□□□□□ -0.07
RIPK3-204ENST00000554756 NBPF12Q5TAG4 269 aaPredicted RBP14.6□□□□□ -0.07
RIPK3-204ENST00000554756 CDAN1Q8IWY9 1227 aa14.6□□□□□ -0.07
RIPK3-204ENST00000554756 KBTBD3Q8NAB2 608 aa14.6□□□□□ -0.07
RIPK3-204ENST00000554756 FAM198AQ9UFP1 575 aa14.6□□□□□ -0.07
RIPK3-204ENST00000554756 ABT1Q9ULW3 272 aaKnown RBP14.6□□□□□ -0.07
RIPK3-204ENST00000554756 PPP2R3BQ9Y5P8 575 aa14.6□□□□□ -0.07
RIPK3-204ENST00000554756 CDC45O75419 566 aa14.6□□□□□ -0.07
RIPK3-204ENST00000554756 ADD2P35612 726 aa14.6□□□□□ -0.07
RIPK3-204ENST00000554756 MFAP1P55081 439 aaKnown RBP14.6□□□□□ -0.07
RIPK3-204ENST00000554756 ZFPM1Q8IX07 1006 aa14.6□□□□□ -0.07
RIPK3-204ENST00000554756 TEX11Q8IYF3 940 aa14.6□□□□□ -0.07
RIPK3-204ENST00000554756 GBA2Q9HCG7 927 aaPredicted RBP14.6□□□□□ -0.07
RIPK3-204ENST00000554756 TCRBV5S4A2TA0A5A2 114 aa14.59□□□□□ -0.07
RIPK3-204ENST00000554756 WDHD1O75717 1129 aaPredicted RBP14.59□□□□□ -0.07
RIPK3-204ENST00000554756 NF2P35240 595 aa14.59□□□□□ -0.07
RIPK3-204ENST00000554756 PPP4CP60510 307 aa14.59□□□□□ -0.07
RIPK3-204ENST00000554756 TTLL12Q14166 644 aaPredicted RBP14.59□□□□□ -0.07
RIPK3-204ENST00000554756 FKBP1CQ5VVH2 108 aa14.59□□□□□ -0.07
RIPK3-204ENST00000554756 MOB2Q70IA6 237 aa14.59□□□□□ -0.07
RIPK3-204ENST00000554756 FSD1Q9BTV5 496 aa14.59□□□□□ -0.07
RIPK3-204ENST00000554756 DDX4Q9NQI0 724 aaKnown RBP14.59□□□□□ -0.07
RIPK3-204ENST00000554756 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
RIPK3-204ENST00000554756 FZD1Q9UP38 647 aa14.59□□□□□ -0.07
RIPK3-204ENST00000554756 MAGEB6P1A0A0J9YX57 407 aa14.58□□□□□ -0.08
RIPK3-204ENST00000554756 ZSCAN25Q6NSZ9 544 aa14.58□□□□□ -0.08
RIPK3-204ENST00000554756 FAM83AQ86UY5 434 aa14.58□□□□□ -0.08
RIPK3-204ENST00000554756 C2orf69Q8N8R5 385 aa14.58□□□□□ -0.08
RIPK3-204ENST00000554756 FAM151AQ8WW52 585 aa14.58□□□□□ -0.08
RIPK3-204ENST00000554756 TEPSINQ96N21 525 aa14.58□□□□□ -0.08
RIPK3-204ENST00000554756 IDI2Q9BXS1 227 aa14.58□□□□□ -0.08
RIPK3-204ENST00000554756 MAST2Q6P0Q8 1798 aa14.58□□□□□ -0.08
RIPK3-204ENST00000554756 MYH2Q9UKX2 1941 aa14.58□□□□□ -0.08
RIPK3-204ENST00000554756 TRIM6-TRIM34B2RNG4 842 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 PLCG2P16885 1265 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 SUPT20HL1Q3ZLR7 823 aa14.57□□□□□ -0.08
RIPK3-204ENST00000554756 TTC22Q5TAA0 569 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms