RNA–Protein interactions for RNA: ENST00000554270.5

PTPN21-205, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 4,008 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-205ENST00000554270 ZNF274Q96GC6 653 aaPredicted RBP13.16□□□□□ -0.3
PTPN21-205ENST00000554270 PIH1D3Q9NQM4 214 aaKnown RBP13.16□□□□□ -0.3
PTPN21-205ENST00000554270 SEC31BQ9NQW1 1179 aa13.16□□□□□ -0.3
PTPN21-205ENST00000554270 SLC4A4Q9Y6R1 1079 aa13.16□□□□□ -0.3
PTPN21-205ENST00000554270 TSGA10IPQ3SY00 556 aa13.16□□□□□ -0.3
PTPN21-205ENST00000554270 UBAC1Q9BSL1 405 aa13.16□□□□□ -0.3
PTPN21-205ENST00000554270 ZFYP08048 801 aaPredicted RBP13.15□□□□□ -0.3
PTPN21-205ENST00000554270 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 TBC1D10CQ8IV04 446 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 GPIHBP1Q8IV16 184 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 PIGBQ92521 554 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 DHX58Q96C10 678 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 IL17RAQ96F46 866 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 PUF60Q9UHX1 559 aaKnown RBP13.15□□□□□ -0.3
PTPN21-205ENST00000554270 RGPD1P0DJD0 1748 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 BTBD18B2RXH4 712 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 SSRP1Q08945 709 aaKnown RBP13.15□□□□□ -0.3
PTPN21-205ENST00000554270 SMIM5Q71RC9 77 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 CYB5R4Q7L1T6 521 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 HOOK1Q9UJC3 728 aaKnown RBP13.15□□□□□ -0.3
PTPN21-205ENST00000554270 XRN1Q8IZH2 1706 aaKnown RBP13.15□□□□□ -0.3
PTPN21-205ENST00000554270 ARHGAP23Q9P227 1491 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 TMEM232C9JQI7 657 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 FOXN1O15353 648 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 POLR2DO15514 142 aaKnown RBP13.15□□□□□ -0.3
PTPN21-205ENST00000554270 CDKL5O76039 1030 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 SEC31AO94979 1220 aaKnown RBP13.15□□□□□ -0.3
PTPN21-205ENST00000554270 MAP3K12Q12852 859 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 MFSD6Q6ZSS7 791 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 CCDC150Q8NCX0 1101 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 CCDC12Q8WUD4 166 aaPredicted RBP13.15□□□□□ -0.3
PTPN21-205ENST00000554270 PRDM4Q9UKN5 801 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 MAPK8IP1Q9UQF2 711 aa13.15□□□□□ -0.3
PTPN21-205ENST00000554270 NCAPD2Q15021 1401 aa13.15□□□□□ -0.31
PTPN21-205ENST00000554270 CASP7P55210 303 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 SART3Q15020 963 aaKnown RBP13.14□□□□□ -0.31
PTPN21-205ENST00000554270 SDR42E1Q8WUS8 393 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 PPP1R13BQ96KQ4 1090 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 PCMTD1Q96MG8 357 aaPredicted RBP13.14□□□□□ -0.31
PTPN21-205ENST00000554270 FEZ1Q99689 392 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 NOL10Q9BSC4 688 aaKnown RBP13.14□□□□□ -0.31
PTPN21-205ENST00000554270 GTPBP4Q9BZE4 634 aaKnown RBP13.14□□□□□ -0.31
PTPN21-205ENST00000554270 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.14□□□□□ -0.31
PTPN21-205ENST00000554270 FAM208AQ9UK61 1670 aaKnown RBP13.14□□□□□ -0.31
PTPN21-205ENST00000554270 CASQ1P31415 396 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 BCAMP50895 628 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 LONRF3Q496Y0 759 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 DPF2Q92785 391 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 ERO1AQ96HE7 468 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 FMN2Q9NZ56 1722 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 CBFA2T2O43439 604 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 PDE6AP16499 860 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 CDC27P30260 824 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 PPFIBP1Q86W92 1011 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 KLHL34Q8N239 644 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 LRRN4CLQ8ND94 238 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 C1orf167Q5SNV9 1468 aa13.14□□□□□ -0.31
PTPN21-205ENST00000554270 ANTXR2P58335 489 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 MYL5Q02045 173 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 ILDR1Q86SU0 546 aaPredicted RBP13.13□□□□□ -0.31
PTPN21-205ENST00000554270 FMR1NBQ8N0W7 255 aaPredicted RBP13.13□□□□□ -0.31
PTPN21-205ENST00000554270 KCNH3Q9ULD8 1083 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 PCDHA5Q9Y5H7 936 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 WDHD1O75717 1129 aaPredicted RBP13.13□□□□□ -0.31
PTPN21-205ENST00000554270 CASP1P29466 404 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 NLRP12P59046 1061 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 LRP10Q7Z4F1 713 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 EEF2KMTQ96G04 330 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 CABP5Q9NP86 173 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 DHX8Q14562 1220 aaKnown RBP13.13□□□□□ -0.31
PTPN21-205ENST00000554270 MCM6Q14566 821 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 NACAP1Q9BZK3 213 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 NFE2L3Q9Y4A8 694 aa13.13□□□□□ -0.31
PTPN21-205ENST00000554270 ZBTB22O15209 634 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 CCZ1BP86790 482 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 CCZ1P86791 482 aaPredicted RBP13.12□□□□□ -0.31
PTPN21-205ENST00000554270 KIF23Q02241 960 aaPredicted RBP13.12□□□□□ -0.31
PTPN21-205ENST00000554270 NR5A1Q13285 461 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 ARMCX5Q6P1M9 558 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 NKX2-3Q8TAU0 364 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 SMARCE1Q969G3 411 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 RTEL1Q9NZ71 1219 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 SLIT1O75093 1534 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 CYP7A1P22680 504 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 EVCP57679 992 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 DIS3L2Q8IYB7 885 aaKnown RBP13.12□□□□□ -0.31
PTPN21-205ENST00000554270 PLCD3Q8N3E9 789 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 TTLL11Q8NHH1 800 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 PHACTR2O75167 634 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 TNNT3P45378 269 aaPredicted RBP13.12□□□□□ -0.31
PTPN21-205ENST00000554270 WTAPQ15007 396 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 APOA5Q6Q788 366 aa13.12□□□□□ -0.31
PTPN21-205ENST00000554270 ZBTB38Q8NAP3 1195 aaPredicted RBP13.12□□□□□ -0.31
PTPN21-205ENST00000554270 CYP2D7A0A087X1C5 515 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 KIF4BQ2VIQ3 1234 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 KIF2AO00139 706 aaPredicted RBP13.11□□□□□ -0.31
PTPN21-205ENST00000554270 EXOC5O00471 708 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 SLC5A1P13866 664 aa13.11□□□□□ -0.31
PTPN21-205ENST00000554270 CCT6AP40227 531 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms