RNA–Protein interactions for RNA: ENST00000553870.1

CHD8-206, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 679 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-206ENST00000553870 TTC41PQ6P2S7 1318 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 TRPM7Q96QT4 1865 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 ERC2O15083 957 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 PPP1R12BO60237 982 aaPredicted RBP11.36□□□□□ -0.59
CHD8-206ENST00000553870 SMARCA5O60264 1052 aaPredicted RBP11.36□□□□□ -0.59
CHD8-206ENST00000553870 PLCG2P16885 1265 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 PPP4CP60510 307 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 ANKRD45Q5TZF3 282 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 NAA16Q6N069 864 aaPredicted RBP11.36□□□□□ -0.59
CHD8-206ENST00000553870 CDC42EP5Q6NZY7 148 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 HAUS7Q99871 368 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 IDI2Q9BXS1 227 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 ZNF408Q9H9D4 720 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 USP40Q9NVE5 1235 aa11.36□□□□□ -0.59
CHD8-206ENST00000553870 AKAP11Q9UKA4 1901 aa11.35□□□□□ -0.59
CHD8-206ENST00000553870 TCP10L2B9ZVM9 353 aa11.35□□□□□ -0.59
CHD8-206ENST00000553870 ENTPD3O75355 529 aa11.35□□□□□ -0.59
CHD8-206ENST00000553870 ECE1P42892 770 aa11.35□□□□□ -0.59
CHD8-206ENST00000553870 ARMC9Q7Z3E5 817 aa11.35□□□□□ -0.59
CHD8-206ENST00000553870 ZNF384Q8TF68 577 aa11.35□□□□□ -0.59
CHD8-206ENST00000553870 FAM151AQ8WW52 585 aa11.35□□□□□ -0.59
CHD8-206ENST00000553870 NOL10Q9BSC4 688 aaKnown RBP11.35□□□□□ -0.59
CHD8-206ENST00000553870 PIH1D3Q9NQM4 214 aaKnown RBP11.35□□□□□ -0.59
CHD8-206ENST00000553870 AOX1Q06278 1338 aa11.35□□□□□ -0.59
CHD8-206ENST00000553870 CNTNAP1P78357 1384 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 IDH1O75874 414 aaKnown RBP11.34□□□□□ -0.59
CHD8-206ENST00000553870 IGHDP01880 384 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 BTDP43251 543 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 HUNKP57058 714 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 HTRA3P83110 453 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 MAP3K11Q16584 847 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 PRAMEF18Q5VWM3 479 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 DLK2Q6UY11 383 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 CCDC102AQ96A19 550 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHD8-206ENST00000553870 BCL11AQ9H165 835 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 BOLA2Q9H3K6 86 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 PAG1Q9NWQ8 432 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 ECM29Q5VYK3 1845 aa11.34□□□□□ -0.59
CHD8-206ENST00000553870 GOLIM4O00461 696 aa11.33□□□□□ -0.6
CHD8-206ENST00000553870 GLRX3O76003 335 aaKnown RBP11.33□□□□□ -0.6
CHD8-206ENST00000553870 CENPBP07199 599 aaPredicted RBP11.33□□□□□ -0.6
CHD8-206ENST00000553870 CYP7A1P22680 504 aa11.33□□□□□ -0.6
CHD8-206ENST00000553870 RHBDL3P58872 404 aa11.33□□□□□ -0.6
CHD8-206ENST00000553870 NBPF12Q5TAG4 269 aaPredicted RBP11.33□□□□□ -0.6
CHD8-206ENST00000553870 ZSCAN25Q6NSZ9 544 aa11.33□□□□□ -0.6
CHD8-206ENST00000553870 JMYQ8N9B5 988 aa11.33□□□□□ -0.6
CHD8-206ENST00000553870 TEPSINQ96N21 525 aa11.33□□□□□ -0.6
CHD8-206ENST00000553870 DNAJC2Q99543 621 aaKnown RBP11.33□□□□□ -0.6
CHD8-206ENST00000553870 ANTXR1Q9H6X2 564 aa11.33□□□□□ -0.6
CHD8-206ENST00000553870 STAP2Q9UGK3 403 aa11.33□□□□□ -0.6
CHD8-206ENST00000553870 SCAF8Q9UPN6 1271 aaKnown RBP11.33□□□□□ -0.6
CHD8-206ENST00000553870 RPAP1Q9BWH6 1393 aaPredicted RBP11.32□□□□□ -0.6
CHD8-206ENST00000553870 MX1P20591 662 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 MAP2K2P36507 400 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 IREB2P48200 963 aaKnown RBP11.32□□□□□ -0.6
CHD8-206ENST00000553870 IRX6P78412 446 aaPredicted RBP11.32□□□□□ -0.6
CHD8-206ENST00000553870 NUCB1Q02818 461 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 TTLL12Q14166 644 aaPredicted RBP11.32□□□□□ -0.6
CHD8-206ENST00000553870 LRRFIP1Q32MZ4 808 aaKnown RBP11.32□□□□□ -0.6
CHD8-206ENST00000553870 LDLRAD1Q5T700 205 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 SLC9C2Q5TAH2 1124 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 DCAF15Q66K64 600 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 RGMBQ6NW40 437 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 CHD1LQ86WJ1 897 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 TICAM2Q86XR7 235 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 MAGEB6Q8N7X4 407 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 TMEM39BQ9GZU3 492 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 MKRN1Q9UHC7 482 aaKnown RBP11.32□□□□□ -0.6
CHD8-206ENST00000553870 MYH2Q9UKX2 1941 aa11.32□□□□□ -0.6
CHD8-206ENST00000553870 USP2O75604 605 aaPredicted RBP11.31□□□□□ -0.6
CHD8-206ENST00000553870 WDHD1O75717 1129 aaPredicted RBP11.31□□□□□ -0.6
CHD8-206ENST00000553870 PDE6AP16499 860 aa11.31□□□□□ -0.6
CHD8-206ENST00000553870 VEGFBP49765 207 aa11.31□□□□□ -0.6
CHD8-206ENST00000553870 RGS3P49796 1198 aa11.31□□□□□ -0.6
CHD8-206ENST00000553870 CACNB3P54284 484 aa11.31□□□□□ -0.6
CHD8-206ENST00000553870 NFIAQ12857 509 aa11.31□□□□□ -0.6
CHD8-206ENST00000553870 UBE3CQ15386 1083 aa11.31□□□□□ -0.6
CHD8-206ENST00000553870 REM2Q8IYK8 340 aaPredicted RBP11.31□□□□□ -0.6
CHD8-206ENST00000553870 CAPNS2Q96L46 248 aa11.31□□□□□ -0.6
CHD8-206ENST00000553870 AATFQ9NY61 560 aaKnown RBP eCLIP11.31□□□□□ -0.62e-13■■■■■ 70.8
CHD8-206ENST00000553870 FAM198AQ9UFP1 575 aa11.31□□□□□ -0.6
CHD8-206ENST00000553870 ANGEL1Q9UNK9 670 aaKnown RBP11.31□□□□□ -0.6
CHD8-206ENST00000553870 NDUFB9Q9Y6M9 179 aa11.31□□□□□ -0.6
CHD8-206ENST00000553870 SALL3Q9BXA9 1300 aa11.31□□□□□ -0.6
CHD8-206ENST00000553870 WDR33Q9C0J8 1336 aaKnown RBP11.31□□□□□ -0.6
CHD8-206ENST00000553870 UBE2Q2LH0YL09 131 aa11.3□□□□□ -0.6
CHD8-206ENST00000553870 ZFYP08048 801 aaPredicted RBP11.3□□□□□ -0.6
CHD8-206ENST00000553870 ZNF157P51786 506 aaPredicted RBP11.3□□□□□ -0.6
CHD8-206ENST00000553870 PDE1AP54750 535 aa11.3□□□□□ -0.6
CHD8-206ENST00000553870 MAP3K9P80192 1104 aa11.3□□□□□ -0.6
CHD8-206ENST00000553870 MAP3K10Q02779 954 aa11.3□□□□□ -0.6
CHD8-206ENST00000553870 TCP10Q12799 353 aa11.3□□□□□ -0.6
CHD8-206ENST00000553870 NOGQ13253 232 aa11.3□□□□□ -0.6
CHD8-206ENST00000553870 TEX11Q8IYF3 940 aa11.3□□□□□ -0.6
CHD8-206ENST00000553870 KBTBD3Q8NAB2 608 aa11.3□□□□□ -0.6
CHD8-206ENST00000553870 PI4K2BQ8TCG2 481 aa11.3□□□□□ -0.6
CHD8-206ENST00000553870 DHX36Q9H2U1 1008 aaKnown RBP11.3□□□□□ -0.6
CHD8-206ENST00000553870 PAPPA2Q9BXP8 1791 aa11.3□□□□□ -0.6
CHD8-206ENST00000553870 TCRBV5S4A2TA0A5A2 114 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms