RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 NMIQ13287 307 aaPredicted RBP21.76■■□□□ 1.07
PSEN1-208ENST00000553719 DLGAP5Q15398 846 aa21.76■■□□□ 1.07
PSEN1-208ENST00000553719 FAM227BQ96M60 508 aa21.76■■□□□ 1.07
PSEN1-208ENST00000553719 M0R2C6 588 aa21.75■■□□□ 1.07
PSEN1-208ENST00000553719 NBPF9Q3BBW0 867 aa21.75■■□□□ 1.07
PSEN1-208ENST00000553719 USP50Q70EL3 339 aaPredicted RBP21.75■■□□□ 1.07
PSEN1-208ENST00000553719 MIGA1Q8NAN2 632 aa21.75■■□□□ 1.07
PSEN1-208ENST00000553719 SEC62Q99442 399 aaKnown RBP21.75■■□□□ 1.07
PSEN1-208ENST00000553719 IL25Q9H293 177 aa21.75■■□□□ 1.07
PSEN1-208ENST00000553719 NMRK2Q9NPI5 230 aa21.75■■□□□ 1.07
PSEN1-208ENST00000553719 HELLSQ9NRZ9 838 aa21.75■■□□□ 1.07
PSEN1-208ENST00000553719 AATFQ9NY61 560 aaKnown RBP eCLIP21.75■■□□□ 1.07
PSEN1-208ENST00000553719 DDX60LQ5H9U9 1706 aaKnown RBP21.75■■□□□ 1.07
PSEN1-208ENST00000553719 DYNLL1P63167 89 aaKnown RBP21.74■■□□□ 1.07
PSEN1-208ENST00000553719 SPDYE2Q495Y8 402 aa21.74■■□□□ 1.07
PSEN1-208ENST00000553719 CDC42EP5Q6NZY7 148 aa21.74■■□□□ 1.07
PSEN1-208ENST00000553719 CDC45O75419 566 aa21.73■■□□□ 1.07
PSEN1-208ENST00000553719 VEGFAP15692 232 aaPredicted RBP21.73■■□□□ 1.07
PSEN1-208ENST00000553719 RBM5P52756 815 aaKnown RBP eCLIP21.73■■□□□ 1.07
PSEN1-208ENST00000553719 CERS3Q8IU89 383 aa21.73■■□□□ 1.07
PSEN1-208ENST00000553719 LCORLQ8N3X6 602 aa21.73■■□□□ 1.07
PSEN1-208ENST00000553719 RRAGCQ9HB90 399 aa21.73■■□□□ 1.07
PSEN1-208ENST00000553719 DIAPH3Q9NSV4 1193 aa21.73■■□□□ 1.07
PSEN1-208ENST00000553719 ASTN2O75129 1339 aaPredicted RBP21.73■■□□□ 1.07
PSEN1-208ENST00000553719 MAGEB6P1A0A0J9YX57 407 aa21.72■■□□□ 1.07
PSEN1-208ENST00000553719 MBD4O95243 580 aa21.72■■□□□ 1.07
PSEN1-208ENST00000553719 BAG3O95817 575 aa21.72■■□□□ 1.07
PSEN1-208ENST00000553719 RBM26Q5T8P6 1007 aaKnown RBP21.72■■□□□ 1.07
PSEN1-208ENST00000553719 PGAP2Q9UHJ9 254 aa21.72■■□□□ 1.07
PSEN1-208ENST00000553719 RAD50Q92878 1312 aa21.72■■□□□ 1.07
PSEN1-208ENST00000553719 GPAA1O43292 621 aa21.71■■□□□ 1.07
PSEN1-208ENST00000553719 WDHD1O75717 1129 aaPredicted RBP21.71■■□□□ 1.07
PSEN1-208ENST00000553719 MCMDC2Q4G0Z9 681 aa21.71■■□□□ 1.07
PSEN1-208ENST00000553719 CWC27Q6UX04 472 aaKnown RBP21.71■■□□□ 1.07
PSEN1-208ENST00000553719 ZNF589Q86UQ0 364 aaPredicted RBP21.71■■□□□ 1.07
PSEN1-208ENST00000553719 PNMA8AQ86V59 439 aaPredicted RBP21.71■■□□□ 1.07
PSEN1-208ENST00000553719 SH3RF3Q8TEJ3 882 aaPredicted RBP21.71■■□□□ 1.07
PSEN1-208ENST00000553719 ZNF526Q8TF50 670 aaPredicted RBP21.71■■□□□ 1.07
PSEN1-208ENST00000553719 STRBPQ96SI9 672 aaKnown RBP21.71■■□□□ 1.07
PSEN1-208ENST00000553719 TDRD3Q9H7E2 651 aaKnown RBP21.71■■□□□ 1.07
PSEN1-208ENST00000553719 ARMT1Q9H993 441 aa21.71■■□□□ 1.07
PSEN1-208ENST00000553719 ZNF70Q9UC06 446 aaPredicted RBP21.71■■□□□ 1.07
PSEN1-208ENST00000553719 FOXP2O15409 715 aa21.7■■□□□ 1.06
PSEN1-208ENST00000553719 PLCG2P16885 1265 aa21.7■■□□□ 1.06
PSEN1-208ENST00000553719 AIDAQ96BJ3 306 aa21.7■■□□□ 1.06
PSEN1-208ENST00000553719 IDI2Q9BXS1 227 aa21.7■■□□□ 1.06
PSEN1-208ENST00000553719 SGSM2O43147 1006 aa21.69■■□□□ 1.06
PSEN1-208ENST00000553719 YY1P25490 414 aa21.69■■□□□ 1.06
PSEN1-208ENST00000553719 NFIAQ12857 509 aa21.69■■□□□ 1.06
PSEN1-208ENST00000553719 FKBP1CQ5VVH2 108 aa21.69■■□□□ 1.06
PSEN1-208ENST00000553719 CCDC129Q6ZRS4 1044 aa21.69■■□□□ 1.06
PSEN1-208ENST00000553719 ZC3H15Q8WU90 426 aaKnown RBP21.69■■□□□ 1.06
PSEN1-208ENST00000553719 USP40Q9NVE5 1235 aa21.69■■□□□ 1.06
PSEN1-208ENST00000553719 MKRN1Q9UHC7 482 aaKnown RBP21.69■■□□□ 1.06
PSEN1-208ENST00000553719 PITPNM2Q9BZ72 1349 aa21.69■■□□□ 1.06
PSEN1-208ENST00000553719 NAV1Q8NEY1 1877 aa21.69■■□□□ 1.06
PSEN1-208ENST00000553719 NPM3O75607 178 aaKnown RBP21.68■■□□□ 1.06
PSEN1-208ENST00000553719 POTEIP0CG38 1075 aa21.68■■□□□ 1.06
PSEN1-208ENST00000553719 POTEJP0CG39 1038 aa21.68■■□□□ 1.06
PSEN1-208ENST00000553719 NOL10Q9BSC4 688 aaKnown RBP21.68■■□□□ 1.06
PSEN1-208ENST00000553719 ESYT1Q9BSJ8 1104 aa21.68■■□□□ 1.06
PSEN1-208ENST00000553719 GGA3Q9NZ52 723 aa21.68■■□□□ 1.06
PSEN1-208ENST00000553719 CCDC171Q6TFL3 1326 aa21.68■■□□□ 1.06
PSEN1-208ENST00000553719 CNTNAP1P78357 1384 aa21.68■■□□□ 1.06
PSEN1-208ENST00000553719 COL2A1P02458 1487 aaPredicted RBP21.67■■□□□ 1.06
PSEN1-208ENST00000553719 CLRN2A0PK11 232 aa21.67■■□□□ 1.06
PSEN1-208ENST00000553719 MYO1BO43795 1136 aa21.67■■□□□ 1.06
PSEN1-208ENST00000553719 CACNB3P54284 484 aa21.67■■□□□ 1.06
PSEN1-208ENST00000553719 ANGEL2Q5VTE6 544 aaKnown RBP21.67■■□□□ 1.06
PSEN1-208ENST00000553719 TEX11Q8IYF3 940 aa21.67■■□□□ 1.06
PSEN1-208ENST00000553719 GPBP1L1Q9HC44 474 aaPredicted RBP21.67■■□□□ 1.06
PSEN1-208ENST00000553719 DDX4Q9NQI0 724 aaKnown RBP21.67■■□□□ 1.06
PSEN1-208ENST00000553719 FAM198AQ9UFP1 575 aa21.67■■□□□ 1.06
PSEN1-208ENST00000553719 KIF3CO14782 793 aa21.66■■□□□ 1.06
PSEN1-208ENST00000553719 PRKAB2O43741 272 aa21.66■■□□□ 1.06
PSEN1-208ENST00000553719 RUFY2Q8WXA3 655 aa21.66■■□□□ 1.06
PSEN1-208ENST00000553719 CRNKL1Q9BZJ0 848 aaKnown RBP21.66■■□□□ 1.06
PSEN1-208ENST00000553719 POLR2AP24928 1970 aaKnown RBP21.66■■□□□ 1.06
PSEN1-208ENST00000553719 RPAP1Q9BWH6 1393 aaPredicted RBP21.65■■□□□ 1.06
PSEN1-208ENST00000553719 FLT1P17948 1338 aa21.65■■□□□ 1.06
PSEN1-208ENST00000553719 GSG1L2A8MUP6 293 aa21.65■■□□□ 1.06
PSEN1-208ENST00000553719 GNAT2P19087 354 aa21.65■■□□□ 1.06
PSEN1-208ENST00000553719 VPS53Q5VIR6 699 aa21.65■■□□□ 1.06
PSEN1-208ENST00000553719 ZNF784Q8NCA9 323 aaPredicted RBP21.65■■□□□ 1.06
PSEN1-208ENST00000553719 EPB41L4AQ9HCS5 686 aaPredicted RBP21.65■■□□□ 1.06
PSEN1-208ENST00000553719 SIPA1L1O43166 1804 aa21.64■■□□□ 1.06
PSEN1-208ENST00000553719 ENTPD3O75355 529 aa21.64■■□□□ 1.05
PSEN1-208ENST00000553719 C8orf34Q49A92 452 aa21.64■■□□□ 1.05
PSEN1-208ENST00000553719 EAPPQ56P03 285 aaPredicted RBP21.64■■□□□ 1.05
PSEN1-208ENST00000553719 FAM83AQ86UY5 434 aa21.64■■□□□ 1.05
PSEN1-208ENST00000553719 LDHDQ86WU2 507 aa21.64■■□□□ 1.05
PSEN1-208ENST00000553719 APOBEC3FQ8IUX4 373 aaKnown RBP21.64■■□□□ 1.05
PSEN1-208ENST00000553719 SDR42E1Q8WUS8 393 aa21.64■■□□□ 1.05
PSEN1-208ENST00000553719 DCP1AQ9NPI6 582 aaPredicted RBP21.64■■□□□ 1.05
PSEN1-208ENST00000553719 ATRNL1Q5VV63 1379 aa21.63■■□□□ 1.05
PSEN1-208ENST00000553719 BAZ2AQ9UIF9 1905 aaKnown RBP21.63■■□□□ 1.05
PSEN1-208ENST00000553719 MFAP1P55081 439 aaKnown RBP21.63■■□□□ 1.05
PSEN1-208ENST00000553719 TGFBRAP1Q8WUH2 860 aa21.63■■□□□ 1.05
PSEN1-208ENST00000553719 VEZTQ9HBM0 779 aa21.63■■□□□ 1.05
PSEN1-208ENST00000553719 ATP8A2Q9NTI2 1148 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms