RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 APOBRQ0VD83 1088 aa8.1□□□□□ -1.11
SYNE2-210ENST00000553455 MAP1SQ66K74 1059 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-210ENST00000553455 SCARA3Q6AZY7 606 aa8.1□□□□□ -1.11
SYNE2-210ENST00000553455 SLITRK4Q8IW52 837 aa8.1□□□□□ -1.11
SYNE2-210ENST00000553455 JARID2Q92833 1246 aaPredicted RBP8.1□□□□□ -1.11
SYNE2-210ENST00000553455 EFR3BQ9Y2G0 817 aa8.1□□□□□ -1.11
SYNE2-210ENST00000553455 TLR3O15455 904 aaKnown RBP8.09□□□□□ -1.11
SYNE2-210ENST00000553455 ADAM11O75078 769 aa8.09□□□□□ -1.11
SYNE2-210ENST00000553455 LMNB1P20700 586 aa8.09□□□□□ -1.11
SYNE2-210ENST00000553455 MAOBP27338 520 aa8.09□□□□□ -1.11
SYNE2-210ENST00000553455 NASPP49321 788 aaPredicted RBP8.09□□□□□ -1.11
SYNE2-210ENST00000553455 POU4F3Q15319 338 aa8.09□□□□□ -1.11
SYNE2-210ENST00000553455 FOXD4L6Q3SYB3 417 aaPredicted RBP8.09□□□□□ -1.11
SYNE2-210ENST00000553455 TREML4Q6UXN2 200 aa8.09□□□□□ -1.11
SYNE2-210ENST00000553455 FOXD4L3Q6VB84 417 aaPredicted RBP8.09□□□□□ -1.11
SYNE2-210ENST00000553455 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.09□□□□□ -1.11
SYNE2-210ENST00000553455 KLHL23Q8NBE8 558 aa8.09□□□□□ -1.11
SYNE2-210ENST00000553455 ARMC5Q96C12 935 aa8.09□□□□□ -1.11
SYNE2-210ENST00000553455 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.09□□□□□ -1.11
SYNE2-210ENST00000553455 ZC3H12CQ9C0D7 883 aaKnown RBP8.09□□□□□ -1.11
SYNE2-210ENST00000553455 CCDC86Q9H6F5 360 aaKnown RBP8.09□□□□□ -1.11
SYNE2-210ENST00000553455 ROBO2Q9HCK4 1378 aa8.09□□□□□ -1.12
SYNE2-210ENST00000553455 CYP11A1P05108 521 aa8.08□□□□□ -1.12
SYNE2-210ENST00000553455 GTF2F1P35269 517 aaKnown RBP eCLIP8.08□□□□□ -1.12
SYNE2-210ENST00000553455 NLRP12P59046 1061 aa8.08□□□□□ -1.12
SYNE2-210ENST00000553455 MPP2Q14168 576 aa8.08□□□□□ -1.12
SYNE2-210ENST00000553455 SUZ12Q15022 739 aaKnown RBP8.08□□□□□ -1.12
SYNE2-210ENST00000553455 SEZ6Q53EL9 994 aa8.08□□□□□ -1.12
SYNE2-210ENST00000553455 MAP4K3Q8IVH8 894 aa8.08□□□□□ -1.12
SYNE2-210ENST00000553455 GPBAR1Q8TDU6 330 aa8.08□□□□□ -1.12
SYNE2-210ENST00000553455 KCNB2Q92953 911 aa8.08□□□□□ -1.12
SYNE2-210ENST00000553455 NKD1Q969G9 470 aa8.08□□□□□ -1.12
SYNE2-210ENST00000553455 TRIM11Q96F44 468 aa8.08□□□□□ -1.12
SYNE2-210ENST00000553455 KCNK4Q9NYG8 393 aa8.08□□□□□ -1.12
SYNE2-210ENST00000553455 LOC100289279A0A1B0GTE1 492 aa8.07□□□□□ -1.12
SYNE2-210ENST00000553455 DDX3YO15523 660 aaKnown RBP8.07□□□□□ -1.12
SYNE2-210ENST00000553455 EIF4EBP3O60516 100 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-210ENST00000553455 ARHGEF15O94989 841 aa8.07□□□□□ -1.12
SYNE2-210ENST00000553455 COL9A2Q14055 689 aaPredicted RBP8.07□□□□□ -1.12
SYNE2-210ENST00000553455 REC114Q7Z4M0 266 aa8.07□□□□□ -1.12
SYNE2-210ENST00000553455 DNAJC2Q99543 621 aaKnown RBP8.07□□□□□ -1.12
SYNE2-210ENST00000553455 CORO1BQ9BR76 489 aa8.07□□□□□ -1.12
SYNE2-210ENST00000553455 KRT82Q9NSB4 513 aa8.07□□□□□ -1.12
SYNE2-210ENST00000553455 ZNF862O60290 1169 aa8.06□□□□□ -1.12
SYNE2-210ENST00000553455 DLGAP3O95886 979 aa8.06□□□□□ -1.12
SYNE2-210ENST00000553455 CDK8P49336 464 aa8.06□□□□□ -1.12
SYNE2-210ENST00000553455 SNRPNP63162 240 aaKnown RBP8.06□□□□□ -1.12
SYNE2-210ENST00000553455 LINC00114Q6XXX2 140 aa8.06□□□□□ -1.12
SYNE2-210ENST00000553455 SVOPQ8N4V2 548 aa8.06□□□□□ -1.12
SYNE2-210ENST00000553455 DTWD1Q8N5C7 304 aa8.06□□□□□ -1.12
SYNE2-210ENST00000553455 USP26Q9BXU7 913 aa8.06□□□□□ -1.12
SYNE2-210ENST00000553455 CD68P34810 354 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-210ENST00000553455 RPL6Q02878 288 aaKnown RBP8.05□□□□□ -1.12
SYNE2-210ENST00000553455 RBL2Q08999 1139 aa8.05□□□□□ -1.12
SYNE2-210ENST00000553455 CWF19L2Q2TBE0 894 aaKnown RBP8.05□□□□□ -1.12
SYNE2-210ENST00000553455 NEDD1Q8NHV4 660 aa8.05□□□□□ -1.12
SYNE2-210ENST00000553455 WDR89Q96FK6 387 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-210ENST00000553455 RRAGCQ9HB90 399 aa8.05□□□□□ -1.12
SYNE2-210ENST00000553455 BRMS1Q9HCU9 246 aa8.05□□□□□ -1.12
SYNE2-210ENST00000553455 POLR3KQ9Y2Y1 108 aaPredicted RBP8.05□□□□□ -1.12
SYNE2-210ENST00000553455 A0A0A0MRY4 1105 aa8.04□□□□□ -1.12
SYNE2-210ENST00000553455 DLL1O00548 723 aa8.04□□□□□ -1.12
SYNE2-210ENST00000553455 TRAPPC3LQ5T215 181 aa8.04□□□□□ -1.12
SYNE2-210ENST00000553455 FBXO11Q86XK2 927 aa8.04□□□□□ -1.12
SYNE2-210ENST00000553455 FMR1NBQ8N0W7 255 aaPredicted RBP8.04□□□□□ -1.12
SYNE2-210ENST00000553455 UBASH3BQ8TF42 649 aa8.04□□□□□ -1.12
SYNE2-210ENST00000553455 STRIP2Q9ULQ0 834 aa8.04□□□□□ -1.12
SYNE2-210ENST00000553455 PPT2Q9UMR5 302 aa8.04□□□□□ -1.12
SYNE2-210ENST00000553455 BPNT1O95861 308 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 LIG1P18858 919 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
SYNE2-210ENST00000553455 PDE3AQ14432 1141 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 INPP5AQ14642 412 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 KIF4BQ2VIQ3 1234 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 CCDC81Q6ZN84 652 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 ACSBG1Q96GR2 724 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 ZNF408Q9H9D4 720 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 ENAMQ9NRM1 1142 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 PCDHA4Q9UN74 947 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 PCDHGC5Q9Y5F6 944 aa8.03□□□□□ -1.12
SYNE2-210ENST00000553455 GFRA2O00451 464 aa8.02□□□□□ -1.13
SYNE2-210ENST00000553455 STK10O94804 968 aaKnown RBP8.02□□□□□ -1.13
SYNE2-210ENST00000553455 WISP1O95388 367 aa8.02□□□□□ -1.13
SYNE2-210ENST00000553455 SSBP05455 408 aaKnown RBP eCLIP8.02□□□□□ -1.13
SYNE2-210ENST00000553455 CLCQ05315 142 aa8.02□□□□□ -1.13
SYNE2-210ENST00000553455 WIPI1Q5MNZ9 446 aaPredicted RBP8.02□□□□□ -1.13
SYNE2-210ENST00000553455 LRFN4Q6PJG9 635 aa8.02□□□□□ -1.13
SYNE2-210ENST00000553455 REXO1Q8N1G1 1221 aaKnown RBP8.02□□□□□ -1.13
SYNE2-210ENST00000553455 PLPPR2Q96GM1 343 aa8.02□□□□□ -1.13
SYNE2-210ENST00000553455 SHDQ96IW2 340 aa8.02□□□□□ -1.13
SYNE2-210ENST00000553455 WDR18Q9BV38 432 aa8.02□□□□□ -1.13
SYNE2-210ENST00000553455 WIPF1O43516 503 aa8.01□□□□□ -1.13
SYNE2-210ENST00000553455 ETFBP38117 255 aa8.01□□□□□ -1.13
SYNE2-210ENST00000553455 DPH6Q7L8W6 267 aa8.01□□□□□ -1.13
SYNE2-210ENST00000553455 PLVAPQ9BX97 442 aa8.01□□□□□ -1.13
SYNE2-210ENST00000553455 SRRTQ9BXP5 876 aaKnown RBP8.01□□□□□ -1.13
SYNE2-210ENST00000553455 LNPKQ9C0E8 428 aa8.01□□□□□ -1.13
SYNE2-210ENST00000553455 ZNRF3Q9ULT6 936 aa8.01□□□□□ -1.13
SYNE2-210ENST00000553455 MRVI1Q9Y6F6 885 aa8.01□□□□□ -1.13
SYNE2-210ENST00000553455 GNB5O14775 395 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms