RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 DDX11Q96FC9 970 aa11.03□□□□□ -0.64
MTHFD1-203ENST00000553391 BRIP1Q9BX63 1249 aa11.03□□□□□ -0.64
MTHFD1-203ENST00000553391 KRT23Q9C075 422 aa11.03□□□□□ -0.64
MTHFD1-203ENST00000553391 ZSCAN16Q9H4T2 348 aaPredicted RBP11.03□□□□□ -0.64
MTHFD1-203ENST00000553391 NCOA5Q9HCD5 579 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-203ENST00000553391 PODXL2Q9NZ53 605 aa11.03□□□□□ -0.64
MTHFD1-203ENST00000553391 RBM27Q9P2N5 1060 aaKnown RBP11.03□□□□□ -0.64
MTHFD1-203ENST00000553391 XDHP47989 1333 aa11.03□□□□□ -0.64
MTHFD1-203ENST00000553391 COL1A1P02452 1464 aaPredicted RBP11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 PTPDC1A2A3K4 754 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 DHX16O60231 1041 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 ADD1P35611 737 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 UBE2HP62256 183 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 MECOMQ03112 1051 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 ZNF827Q17R98 1081 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 MFSD6Q6ZSS7 791 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 SP8Q8IXZ3 490 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 KLHL34Q8N239 644 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 FAM184AQ8NB25 1140 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 WDR66Q8TBY9 1149 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 RPGRQ92834 1020 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 CNNM2Q9H8M5 875 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 GRPEL1Q9HAV7 217 aa11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 ANGEL1Q9UNK9 670 aaKnown RBP11.02□□□□□ -0.65
MTHFD1-203ENST00000553391 PPP4CP60510 307 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 KRT85P78386 507 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 PPARAQ07869 468 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 FAM173BQ6P4H8 233 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 TMC4Q7Z404 712 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 FERMT3Q86UX7 667 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 TMTC2Q8N394 836 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 RNF41Q9H4P4 317 aaPredicted RBP11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 LY9Q9HBG7 655 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 SENP2Q9HC62 589 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 FAM217BQ9NTX9 383 aaPredicted RBP11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 ANKIB1Q9P2G1 1089 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 KIF3AQ9Y496 699 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 TAF1P21675 1872 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 ELP1O95163 1332 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 NEDD4P46934 1319 aa11.01□□□□□ -0.65
MTHFD1-203ENST00000553391 H3BQV1 296 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 KDM4AO75164 1064 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 IL1R1P14778 569 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 TDO2P48775 406 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 CHAF1AQ13111 956 aaPredicted RBP11□□□□□ -0.65
MTHFD1-203ENST00000553391 SBK1Q52WX2 424 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 IFFO2Q5TF58 517 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 ATL3Q6DD88 541 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 CTR9Q6PD62 1173 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 LRSAM1Q6UWE0 723 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 TTC6Q86TZ1 520 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 SLC51AQ86UW1 340 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 SDR42E1Q8WUS8 393 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 SCAND2PQ9GZW5 306 aaPredicted RBP11□□□□□ -0.65
MTHFD1-203ENST00000553391 CD209Q9NNX6 404 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 TFIP11Q9UBB9 837 aaKnown RBP11□□□□□ -0.65
MTHFD1-203ENST00000553391 RCOR1Q9UKL0 485 aa11□□□□□ -0.65
MTHFD1-203ENST00000553391 NAP1L2Q9ULW6 460 aaPredicted RBP11□□□□□ -0.65
MTHFD1-203ENST00000553391 MYO5AQ9Y4I1 1855 aaKnown RBP11□□□□□ -0.65
MTHFD1-203ENST00000553391 MYH7P12883 1935 aa10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 IFIT3O14879 490 aaKnown RBP10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 LETM1O95202 739 aaPredicted RBP10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 PCP11498 1178 aaKnown RBP10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 NTRK3Q16288 839 aa10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 TMEM67Q5HYA8 995 aa10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 ZNF804AQ7Z570 1209 aa10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 TBC1D16Q8TBP0 767 aa10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 ATP8A2Q9NTI2 1148 aa10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 ORC3Q9UBD5 711 aaPredicted RBP10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 RGS17Q9UGC6 210 aaPredicted RBP10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 POLLQ9UGP5 575 aa10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 GGA1Q9UJY5 639 aa10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 LAMA4Q16363 1823 aa10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 DOCK2Q92608 1830 aa10.99□□□□□ -0.65
MTHFD1-203ENST00000553391 BRWD3Q6RI45 1802 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 UBR3Q6ZT12 1888 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 GOLGA8BA8MQT2 603 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 MINDY4BA8MYZ0 360 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 USP17L12C9JPN9 530 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 USP17L21D6R901 530 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 ZBTB43O43298 467 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 FIBPO43427 364 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 LDHCP07864 332 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 PRDX5P30044 214 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 CDC27P30260 824 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 SEC23AQ15436 765 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 APOA5Q6Q788 366 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 FBXO18Q8NFZ0 1043 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 LEO1Q8WVC0 666 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 SYAP1Q96A49 352 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 FAM163AQ96GL9 167 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 CRNKL1Q9BZJ0 848 aaKnown RBP10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 RBSNQ9H1K0 784 aa10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 DCP1AQ9NPI6 582 aaPredicted RBP10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 MKRN1Q9UHC7 482 aaKnown RBP10.98□□□□□ -0.65
MTHFD1-203ENST00000553391 SMIM22K7EJ46 135 aa10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 ORC4O43929 436 aa10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 LDHBP07195 334 aaKnown RBP10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 SRGNP10124 158 aa10.97□□□□□ -0.65
MTHFD1-203ENST00000553391 NPR1P16066 1061 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 177.1 ms