RNA–Protein interactions for RNA: ENST00000553029.1

LINC02406-201, Transcript of long intergenic non-protein coding RNA 2406, humanhuman

TSL 3 BASIC

Gene LINC02406, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02406-201ENST00000553029 MED23Q9ULK4 1368 aa8.17□□□□□ -1.1
LINC02406-201ENST00000553029 PFASO15067 1338 aa8.16□□□□□ -1.1
LINC02406-201ENST00000553029 COL4A1P02462 1669 aa8.16□□□□□ -1.1
LINC02406-201ENST00000553029 MAP3K9P80192 1104 aa8.16□□□□□ -1.1
LINC02406-201ENST00000553029 MRPS5P82675 430 aaKnown RBP8.16□□□□□ -1.1
LINC02406-201ENST00000553029 IRF5Q13568 498 aa8.16□□□□□ -1.1
LINC02406-201ENST00000553029 RASA3Q14644 834 aa8.16□□□□□ -1.1
LINC02406-201ENST00000553029 TAF7Q15545 349 aaPredicted RBP8.16□□□□□ -1.1
LINC02406-201ENST00000553029 LRP10Q7Z4F1 713 aa8.16□□□□□ -1.1
LINC02406-201ENST00000553029 SPNS2Q8IVW8 549 aa8.16□□□□□ -1.1
LINC02406-201ENST00000553029 THUMPD2Q9BTF0 503 aaKnown RBP8.16□□□□□ -1.1
LINC02406-201ENST00000553029 PRKAR2BP31323 418 aa8.15□□□□□ -1.1
LINC02406-201ENST00000553029 TNFAIP1Q13829 316 aa8.15□□□□□ -1.1
LINC02406-201ENST00000553029 DCTN1Q14203 1278 aa8.15□□□□□ -1.1
LINC02406-201ENST00000553029 ANKRD23Q86SG2 305 aa8.15□□□□□ -1.1
LINC02406-201ENST00000553029 ERO1BQ86YB8 467 aa8.15□□□□□ -1.1
LINC02406-201ENST00000553029 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.15□□□□□ -1.1
LINC02406-201ENST00000553029 KHSRPQ92945 711 aaKnown RBP eCLIP8.15□□□□□ -1.1
LINC02406-201ENST00000553029 ZNF428Q96B54 188 aa8.15□□□□□ -1.1
LINC02406-201ENST00000553029 PHACTR3Q96KR7 559 aa8.15□□□□□ -1.1
LINC02406-201ENST00000553029 PARK7Q99497 189 aaKnown RBP8.15□□□□□ -1.1
LINC02406-201ENST00000553029 COA1Q9GZY4 146 aa8.15□□□□□ -1.1
LINC02406-201ENST00000553029 MIS18AQ9NYP9 233 aa8.15□□□□□ -1.1
LINC02406-201ENST00000553029 LAMB2P55268 1798 aa8.15□□□□□ -1.11
LINC02406-201ENST00000553029 ALPK3Q96L96 1907 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 PDHXO00330 501 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 IRF6O14896 467 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 BCRP11274 1271 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 EIF4A1P60842 406 aaKnown RBP8.14□□□□□ -1.11
LINC02406-201ENST00000553029 ARSIQ5FYB1 569 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 TTLL5Q6EMB2 1281 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 PNISRQ8TF01 805 aaKnown RBP8.14□□□□□ -1.11
LINC02406-201ENST00000553029 FAM89AQ96GI7 184 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 NECAB3Q96P71 396 aaPredicted RBP8.14□□□□□ -1.11
LINC02406-201ENST00000553029 SEC31BQ9NQW1 1179 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 OGDHLQ9ULD0 1010 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 PCDHAC2Q9Y5I4 1007 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 SNCAIPQ9Y6H5 919 aa8.14□□□□□ -1.11
LINC02406-201ENST00000553029 TNPO2O14787 897 aaKnown RBP8.13□□□□□ -1.11
LINC02406-201ENST00000553029 PPIL2Q13356 520 aa8.13□□□□□ -1.11
LINC02406-201ENST00000553029 GRIN2CQ14957 1233 aa8.13□□□□□ -1.11
LINC02406-201ENST00000553029 SHHQ15465 462 aa8.13□□□□□ -1.11
LINC02406-201ENST00000553029 LRRC26Q2I0M4 334 aa8.13□□□□□ -1.11
LINC02406-201ENST00000553029 CFAP100Q494V2 611 aa8.13□□□□□ -1.11
LINC02406-201ENST00000553029 PPM1EQ8WY54 764 aa8.13□□□□□ -1.11
LINC02406-201ENST00000553029 EPHX3Q9H6B9 360 aa8.13□□□□□ -1.11
LINC02406-201ENST00000553029 KNSTRNQ9Y448 316 aa8.13□□□□□ -1.11
LINC02406-201ENST00000553029 PSME4Q14997 1843 aa8.13□□□□□ -1.11
LINC02406-201ENST00000553029 MUC6Q6W4X9 2439 aa8.12□□□□□ -1.11
LINC02406-201ENST00000553029 IRS4O14654 1257 aaPredicted RBP8.12□□□□□ -1.11
LINC02406-201ENST00000553029 HTATSF1O43719 755 aaKnown RBP8.12□□□□□ -1.11
LINC02406-201ENST00000553029 GTPBP6O43824 516 aaPredicted RBP8.12□□□□□ -1.11
LINC02406-201ENST00000553029 HMGCRP04035 888 aa8.12□□□□□ -1.11
LINC02406-201ENST00000553029 ANXA1P04083 346 aa8.12□□□□□ -1.11
LINC02406-201ENST00000553029 COL6A1P12109 1028 aa8.12□□□□□ -1.11
LINC02406-201ENST00000553029 GTF2IP78347 998 aa8.12□□□□□ -1.11
LINC02406-201ENST00000553029 AIMP1Q12904 312 aaKnown RBP8.12□□□□□ -1.11
LINC02406-201ENST00000553029 PDIA6Q15084 440 aa8.12□□□□□ -1.11
LINC02406-201ENST00000553029 PROSER3Q2NL68 480 aa8.12□□□□□ -1.11
LINC02406-201ENST00000553029 RTL5Q5HYW3 569 aaPredicted RBP8.12□□□□□ -1.11
LINC02406-201ENST00000553029 C9orf50Q5SZB4 431 aa8.12□□□□□ -1.11
LINC02406-201ENST00000553029 COPS6Q7L5N1 327 aa8.12□□□□□ -1.11
LINC02406-201ENST00000553029 GOLGA6L2Q8N9W4 650 aaPredicted RBP8.12□□□□□ -1.11
LINC02406-201ENST00000553029 HMX1Q9NP08 348 aaPredicted RBP8.12□□□□□ -1.11
LINC02406-201ENST00000553029 PRKAG2Q9UGJ0 569 aa8.12□□□□□ -1.11
LINC02406-201ENST00000553029 COL3A1P02461 1466 aaPredicted RBP8.12□□□□□ -1.11
LINC02406-201ENST00000553029 AOX1Q06278 1338 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 GPR37L1O60883 481 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 FOXK1P85037 733 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 FOXK2Q01167 660 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 MMRN1Q13201 1228 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 VARS2Q5ST30 1063 aaKnown RBP8.11□□□□□ -1.11
LINC02406-201ENST00000553029 AKNAD1Q5T1N1 836 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 ANKRD18AQ8IVF6 992 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 ZBTB38Q8NAP3 1195 aaPredicted RBP8.11□□□□□ -1.11
LINC02406-201ENST00000553029 TMC2Q8TDI7 906 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 XAGE3Q8WTP9 111 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 PRMT6Q96LA8 375 aaPredicted RBP8.11□□□□□ -1.11
LINC02406-201ENST00000553029 TEPSINQ96N21 525 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 GAS2L1Q99501 681 aaPredicted RBP8.11□□□□□ -1.11
LINC02406-201ENST00000553029 RSPH6AQ9H0K4 717 aa8.11□□□□□ -1.11
LINC02406-201ENST00000553029 GPHNQ9NQX3 736 aaPredicted RBP8.11□□□□□ -1.11
LINC02406-201ENST00000553029 F8W031 263 aaPredicted RBP8.1□□□□□ -1.11
LINC02406-201ENST00000553029 U2AF1L5P0DN76 240 aaPredicted RBP8.1□□□□□ -1.11
LINC02406-201ENST00000553029 CYP2C8P10632 490 aa8.1□□□□□ -1.11
LINC02406-201ENST00000553029 HSP90B1P14625 803 aaKnown RBP8.1□□□□□ -1.11
LINC02406-201ENST00000553029 EIF2S2P20042 333 aaKnown RBP8.1□□□□□ -1.11
LINC02406-201ENST00000553029 RBM5P52756 815 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC02406-201ENST00000553029 U2AF1Q01081 240 aaKnown RBP eCLIP8.1□□□□□ -1.11
LINC02406-201ENST00000553029 PPATQ06203 517 aa8.1□□□□□ -1.11
LINC02406-201ENST00000553029 CCDC152Q4G0S7 254 aa8.1□□□□□ -1.11
LINC02406-201ENST00000553029 POTEEQ6S8J3 1075 aa8.1□□□□□ -1.11
LINC02406-201ENST00000553029 COA7Q96BR5 231 aa8.1□□□□□ -1.11
LINC02406-201ENST00000553029 WRNIP1Q96S55 665 aa8.1□□□□□ -1.11
LINC02406-201ENST00000553029 OTOFQ9HC10 1997 aa8.1□□□□□ -1.11
LINC02406-201ENST00000553029 ZNF316A6NFI3 1004 aaPredicted RBP8.09□□□□□ -1.11
LINC02406-201ENST00000553029 TNNI2P48788 182 aa8.09□□□□□ -1.11
LINC02406-201ENST00000553029 CCT4P50991 539 aaKnown RBP8.09□□□□□ -1.11
LINC02406-201ENST00000553029 AMER1Q5JTC6 1135 aaPredicted RBP8.09□□□□□ -1.11
LINC02406-201ENST00000553029 RIC3Q7Z5B4 369 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 180 ms