RNA–Protein interactions for RNA: ENST00000552872.5

MMP19-209, Transcript of matrix metallopeptidase 19, humanhuman

TSL 1 (best)

Gene MMP19, Length 2,350 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-209ENST00000552872 PRKAB2O43741 272 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 C15orf52Q6ZUT6 534 aaKnown RBP12.13□□□□□ -0.47
MMP19-209ENST00000552872 AATFQ9NY61 560 aaKnown RBP eCLIP12.13□□□□□ -0.47
MMP19-209ENST00000552872 GJA3Q9Y6H8 435 aa12.13□□□□□ -0.47
MMP19-209ENST00000552872 TCRBV5S4A2TA0A5A2 114 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 DYNC1I1O14576 645 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 LDHBP07195 334 aaKnown RBP12.12□□□□□ -0.47
MMP19-209ENST00000552872 ADD2P35612 726 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 CC2D2BQ6DHV5 1058 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 NIM1KQ8IY84 436 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 SMIM22K7EJ46 135 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 EVX2Q03828 476 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 MAP3K12Q12852 859 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 CASC1Q6TDU7 716 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 LCORLQ8N3X6 602 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 NSUN4Q96CB9 384 aaKnown RBP12.12□□□□□ -0.47
MMP19-209ENST00000552872 TAF6LQ9Y6J9 622 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 SBF1O95248 1867 aa12.12□□□□□ -0.47
MMP19-209ENST00000552872 SGSM2O43147 1006 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 MBD4O95243 580 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 CXCL9Q07325 125 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 TTF1Q15361 905 aaPredicted RBP12.11□□□□□ -0.47
MMP19-209ENST00000552872 NAA16Q6N069 864 aaPredicted RBP12.11□□□□□ -0.47
MMP19-209ENST00000552872 SUPT20HQ8NEM7 779 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 TTF2Q9UNY4 1162 aaKnown RBP12.11□□□□□ -0.47
MMP19-209ENST00000552872 ZNF541Q9H0D2 1346 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 USP17L3A6NCW0 530 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 USP17L4A6NCW7 530 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 CACNB3P54284 484 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 COL9A3Q14050 684 aaPredicted RBP12.11□□□□□ -0.47
MMP19-209ENST00000552872 HS1BP3Q53T59 392 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 ZMYM1Q5SVZ6 1142 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 DACT2Q5SW24 774 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 USP17L1Q7RTZ2 530 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 SDR42E1Q8WUS8 393 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 JDP2Q8WYK2 163 aa12.11□□□□□ -0.47
MMP19-209ENST00000552872 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.11□□□□□ -0.47
MMP19-209ENST00000552872 ZNF646O15015 1829 aaPredicted RBP12.1□□□□□ -0.47
MMP19-209ENST00000552872 GPAA1O43292 621 aa12.1□□□□□ -0.47
MMP19-209ENST00000552872 ZNF500O60304 480 aaPredicted RBP12.1□□□□□ -0.47
MMP19-209ENST00000552872 RBM25P49756 843 aaKnown RBP12.1□□□□□ -0.47
MMP19-209ENST00000552872 RBM5P52756 815 aaKnown RBP eCLIP12.1□□□□□ -0.47
MMP19-209ENST00000552872 MCMDC2Q4G0Z9 681 aa12.1□□□□□ -0.47
MMP19-209ENST00000552872 SOGA3Q5TF21 947 aa12.1□□□□□ -0.47
MMP19-209ENST00000552872 PODNQ7Z5L7 613 aa12.1□□□□□ -0.47
MMP19-209ENST00000552872 WDR66Q8TBY9 1149 aa12.1□□□□□ -0.47
MMP19-209ENST00000552872 RNF181Q9P0P0 153 aa12.1□□□□□ -0.47
MMP19-209ENST00000552872 PALD1Q9ULE6 856 aa12.1□□□□□ -0.47
MMP19-209ENST00000552872 BAZ2AQ9UIF9 1905 aaKnown RBP12.1□□□□□ -0.47
MMP19-209ENST00000552872 SEMA3EO15041 775 aa12.1□□□□□ -0.47
MMP19-209ENST00000552872 APPP05067 770 aa12.1□□□□□ -0.47
MMP19-209ENST00000552872 RBM26Q5T8P6 1007 aaKnown RBP12.1□□□□□ -0.47
MMP19-209ENST00000552872 CCDC94Q9BW85 323 aaPredicted RBP12.1□□□□□ -0.47
MMP19-209ENST00000552872 ZNRF3Q9ULT6 936 aa12.1□□□□□ -0.47
MMP19-209ENST00000552872 FOXP2O15409 715 aa12.09□□□□□ -0.47
MMP19-209ENST00000552872 EGFRP00533 1210 aa12.09□□□□□ -0.47
MMP19-209ENST00000552872 ZSCAN20P17040 1043 aaPredicted RBP12.09□□□□□ -0.47
MMP19-209ENST00000552872 HAND2P61296 217 aa12.09□□□□□ -0.47
MMP19-209ENST00000552872 AIDAQ96BJ3 306 aa12.09□□□□□ -0.47
MMP19-209ENST00000552872 GOLGA6L22H0YM25 854 aa12.08□□□□□ -0.47
MMP19-209ENST00000552872 APPBP2Q92624 585 aa12.08□□□□□ -0.47
MMP19-209ENST00000552872 LSG1Q9H089 658 aaKnown RBP12.08□□□□□ -0.47
MMP19-209ENST00000552872 DTNBO60941 627 aa12.08□□□□□ -0.48
MMP19-209ENST00000552872 SLURP2P0DP57 97 aa12.08□□□□□ -0.48
MMP19-209ENST00000552872 PPP4R3BQ5MIZ7 849 aa12.08□□□□□ -0.48
MMP19-209ENST00000552872 C9orf131Q5VYM1 1079 aa12.08□□□□□ -0.48
MMP19-209ENST00000552872 SH3RF3Q8TEJ3 882 aaPredicted RBP12.08□□□□□ -0.48
MMP19-209ENST00000552872 USP26Q9BXU7 913 aa12.08□□□□□ -0.48
MMP19-209ENST00000552872 INCENPQ9NQS7 918 aa12.08□□□□□ -0.48
MMP19-209ENST00000552872 NOL7Q9UMY1 257 aaKnown RBP12.08□□□□□ -0.48
MMP19-209ENST00000552872 CCDC171Q6TFL3 1326 aa12.08□□□□□ -0.48
MMP19-209ENST00000552872 FAM205AQ6ZU69 1335 aa12.08□□□□□ -0.48
MMP19-209ENST00000552872 CYP2D7A0A087X1C5 515 aa12.07□□□□□ -0.48
MMP19-209ENST00000552872 MAGEB6P1A0A0J9YX57 407 aa12.07□□□□□ -0.48
MMP19-209ENST00000552872 KLHL40Q2TBA0 621 aa12.07□□□□□ -0.48
MMP19-209ENST00000552872 STRIP1Q5VSL9 837 aa12.07□□□□□ -0.48
MMP19-209ENST00000552872 HSPD1P10809 573 aaKnown RBP12.07□□□□□ -0.48
MMP19-209ENST00000552872 CPA1P15085 419 aa12.07□□□□□ -0.48
MMP19-209ENST00000552872 LMNB1P20700 586 aa12.07□□□□□ -0.48
MMP19-209ENST00000552872 BTDP43251 543 aa12.07□□□□□ -0.48
MMP19-209ENST00000552872 RGS22Q8NE09 1264 aa12.07□□□□□ -0.48
MMP19-209ENST00000552872 DDNO94850 711 aaPredicted RBP12.06□□□□□ -0.48
MMP19-209ENST00000552872 PICALMQ13492 652 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 UBE3CQ15386 1083 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 CSPP1Q1MSJ5 1256 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 RASEFQ8IZ41 740 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 PLCD3Q8N3E9 789 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 RUFY2Q8WXA3 655 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 STRBPQ96SI9 672 aaKnown RBP12.06□□□□□ -0.48
MMP19-209ENST00000552872 DAGLAQ9Y4D2 1042 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 SLC4A4Q9Y6R1 1079 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 HIP1O00291 1037 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 KIF20AO95235 890 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 CIAPIN1Q6FI81 312 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 RSBN1LQ6PCB5 846 aaPredicted RBP12.06□□□□□ -0.48
MMP19-209ENST00000552872 SASS6Q6UVJ0 657 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 CLEC17AQ6ZS10 378 aa12.06□□□□□ -0.48
MMP19-209ENST00000552872 RIOK1Q9BRS2 568 aaKnown RBP12.06□□□□□ -0.48
MMP19-209ENST00000552872 EPB41L4AQ9HCS5 686 aaPredicted RBP12.06□□□□□ -0.48
MMP19-209ENST00000552872 HELLSQ9NRZ9 838 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms