RNA–Protein interactions for RNA: ENST00000552620.1

CHMP4A-210, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 716 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-210ENST00000552620 SBNO1A3KN83 1393 aa7.28□□□□□ -1.24
CHMP4A-210ENST00000552620 CYP2E1P05181 493 aaPredicted RBP7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 PCSK2P16519 638 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 TATP17735 454 aaPredicted RBP7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 MCCP23508 829 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 ZNF445P59923 1031 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 ATP8B2P98198 1209 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 CCDC173Q0VFZ6 552 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 MTHFSDQ2M296 383 aaKnown RBP7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 CCDC30Q5VVM6 783 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 RHPN1Q8TCX5 695 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 ANP32BQ92688 251 aaKnown RBP7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 STK31Q9BXU1 1019 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 CCDC87Q9NVE4 849 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 FAM13BQ9NYF5 915 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 ZDHHC3Q9NYG2 299 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 KLK14Q9P0G3 267 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 FLT4P35916 1363 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 KDRP35968 1356 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 PTPRUQ92729 1446 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 AOX1Q06278 1338 aa7.27□□□□□ -1.25
CHMP4A-210ENST00000552620 TREHO43280 583 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 MZF1P28698 734 aaPredicted RBP7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 PDE1AP54750 535 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 ANAPC15P60006 121 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 PLCB3Q01970 1234 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 C4orf17Q53FE4 359 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 TTC16Q8NEE8 873 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 AIDAQ96BJ3 306 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 TRIM44Q96DX7 344 aaPredicted RBP7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 IL17RAQ96F46 866 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 PPP1R9BQ96SB3 815 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 MEIS3Q99687 375 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 PANK2Q9BZ23 570 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 GPC6Q9Y625 555 aaPredicted RBP7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 DDX49Q9Y6V7 483 aaKnown RBP7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 RGPD1P0DJD0 1748 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 MAP3K19Q56UN5 1328 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 IGSF1Q8N6C5 1336 aa7.26□□□□□ -1.25
CHMP4A-210ENST00000552620 TOPAZ1Q8N9V7 1692 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 MSH6P52701 1360 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 NALCNQ8IZF0 1738 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 GNAT3A8MTJ3 354 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 SPATA31C2B4DYI2 1134 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 ZBTB39O15060 712 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 RAB11FIP3O75154 756 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 BMP2P12643 396 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 TXLNAP40222 546 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 ZAP70P43403 619 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 AMPHP49418 695 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 DNM1Q05193 864 aaKnown RBP7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 KRT24Q2M2I5 525 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 ETFBKMTQ8IXQ9 262 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 FAM129BQ96TA1 746 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 LRRCC1Q9C099 1032 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 STAP2Q9UGK3 403 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 TSPOAP1O95153 1857 aa7.25□□□□□ -1.25
CHMP4A-210ENST00000552620 UBR1Q8IWV7 1749 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 SMARCA5O60264 1052 aaPredicted RBP7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 RPLP1P05386 114 aaKnown RBP7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 P4HBP07237 508 aaKnown RBP7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 LTKP29376 864 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 FMR1Q06787 632 aaKnown RBP eCLIP7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 CUL4AQ13619 759 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 TAF7Q15545 349 aaPredicted RBP7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 HS1BP3Q53T59 392 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 ATCAYQ86WG3 371 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 GAS2L3Q86XJ1 694 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 TREML1Q86YW5 311 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 NGDNQ8NEJ9 315 aaKnown RBP7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 OTUD7AQ8TE49 926 aaPredicted RBP7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 EDEM1Q92611 657 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 INTS4Q96HW7 963 aaKnown RBP7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 LMBRD1Q9NUN5 540 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 KIAA1522Q9P206 1035 aaPredicted RBP7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 POLIQ9UNA4 740 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 SALL3Q9BXA9 1300 aa7.24□□□□□ -1.25
CHMP4A-210ENST00000552620 CACNA1FO60840 1977 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 MBD3O95983 291 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 AVPP01185 164 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 VAMP1P23763 118 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 CTSOP43234 321 aaPredicted RBP7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 ATP2B2Q01814 1243 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 EHHADHQ08426 723 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 WDR44Q5JSH3 913 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 MCTP1Q6DN14 999 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 SLC4A10Q6U841 1118 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 BICDL1Q6ZP65 573 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 G2E3Q7L622 706 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 GJD3Q8N144 294 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 THEMISQ8N1K5 641 aaPredicted RBP7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 ALKBH8Q96BT7 664 aaKnown RBP7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 NEUROD4Q9HD90 331 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 ANKIB1Q9P2G1 1089 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 ANKARQ7Z5J8 1434 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 PEAK1Q9H792 1746 aa7.23□□□□□ -1.25
CHMP4A-210ENST00000552620 TGFBR3LH3BV60 316 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 PDGFAP04085 211 aa7.22□□□□□ -1.25
CHMP4A-210ENST00000552620 HOXB7P09629 217 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms