RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 RRAGDQ9NQL2 400 aaPredicted RBP16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 ORC3Q9UBD5 711 aaPredicted RBP16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 CACNA1SQ13698 1873 aa16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 GUCY1B3Q02153 619 aa16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 STAG1Q8WVM7 1258 aa16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 PGBD1Q96JS3 809 aa16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 PDLIM2Q96JY6 352 aa16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 KRT23Q9C075 422 aa16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 LRRC4BQ9NT99 713 aa16.41■□□□□ 0.22
RAB3IP-216ENST00000552199 MAGEB6P1A0A0J9YX57 407 aa16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 APOA5Q6Q788 366 aa16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 MFSD6Q6ZSS7 791 aa16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 SGMS1Q86VZ5 419 aa16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 ZNF396Q96N95 335 aaPredicted RBP16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 FUCA2Q9BTY2 467 aa16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 LY9Q9HBG7 655 aa16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 ZSWIM5Q9P217 1185 aa16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 RCOR1Q9UKL0 485 aa16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 TNRC6CQ9HCJ0 1690 aaKnown RBP16.4■□□□□ 0.22
RAB3IP-216ENST00000552199 MYH13Q9UKX3 1938 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 KDM4AO75164 1064 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 KLRK1P26718 216 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 LIFRP42702 1097 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 METAP2P50579 478 aaKnown RBP eCLIP16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 NFIXQ14938 502 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 TMEM67Q5HYA8 995 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 C8orf76Q96K31 380 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 SENP2Q9HC62 589 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 PDS5AQ29RF7 1337 aaKnown RBP16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 NPHP1O15259 732 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 ADRA2BP18089 450 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 HIBADHP31937 336 aaKnown RBP16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 UVSSAQ2YD98 709 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 ILDR1Q86SU0 546 aaPredicted RBP16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 RGS22Q8NE09 1264 aa16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 RIOK1Q9BRS2 568 aaKnown RBP16.39■□□□□ 0.21
RAB3IP-216ENST00000552199 IFIT3O14879 490 aaKnown RBP16.38■□□□□ 0.21
RAB3IP-216ENST00000552199 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
RAB3IP-216ENST00000552199 FBXO18Q8NFZ0 1043 aa16.38■□□□□ 0.21
RAB3IP-216ENST00000552199 NUP62CLQ9H1M0 184 aa16.38■□□□□ 0.21
RAB3IP-216ENST00000552199 ZBTB43O43298 467 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 CDKL5O76039 1030 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 ZNF384Q8TF68 577 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 USP28Q96RU2 1077 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 RNF41Q9H4P4 317 aaPredicted RBP16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 QTRT2Q9H974 415 aaKnown RBP16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 DDX19AQ9NUU7 478 aaKnown RBP16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 DACT1Q9NYF0 836 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 TFCP2L1Q9NZI6 479 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 ANAPC4Q9UJX5 808 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 UBR3Q6ZT12 1888 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 ZBTB22O15209 634 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 CDC27P30260 824 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 PPARAQ07869 468 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 OTUD7BQ6GQQ9 843 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 CPLX2Q6PUV4 134 aaKnown RBP16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 BICD2Q8TD16 824 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 SDR42E1Q8WUS8 393 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 MTA3Q9BTC8 594 aa16.37■□□□□ 0.21
RAB3IP-216ENST00000552199 IRS2Q9Y4H2 1338 aa16.36■□□□□ 0.21
RAB3IP-216ENST00000552199 ESPNB1AK53 854 aa16.36■□□□□ 0.21
RAB3IP-216ENST00000552199 DYNLL1P63167 89 aaKnown RBP16.36■□□□□ 0.21
RAB3IP-216ENST00000552199 MAP3K11Q16584 847 aa16.36■□□□□ 0.21
RAB3IP-216ENST00000552199 RRP12Q5JTH9 1297 aaKnown RBP16.36■□□□□ 0.21
RAB3IP-216ENST00000552199 CNBD1Q8NA66 436 aa16.36■□□□□ 0.21
RAB3IP-216ENST00000552199 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.21
RAB3IP-216ENST00000552199 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 CCDC69A6NI79 296 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 GOLGA8AA7E2F4 631 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 RXRAP19793 462 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 GRAPQ13588 217 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 MICU3Q86XE3 530 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 GRAPLQ8TC17 118 aaPredicted RBP16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 NSUN4Q96CB9 384 aaKnown RBP16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 BRIP1Q9BX63 1249 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 CLSTN2Q9H4D0 955 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 TOMM22Q9NS69 142 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 FAM217BQ9NTX9 383 aaPredicted RBP16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 SLC12A7Q9Y666 1083 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 NR1I2O75469 434 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 CCDC192P0DO97 292 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 SART3Q15020 963 aaKnown RBP16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 NTRK3Q16288 839 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 HS1BP3Q53T59 392 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 BRAPQ7Z569 592 aa16.35■□□□□ 0.21
RAB3IP-216ENST00000552199 NID2Q14112 1375 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 MINDY4BA8MYZ0 360 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 MECOMQ03112 1051 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 CAMK4Q16566 473 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 SLC27A3Q5K4L6 730 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 SYNE3Q6ZMZ3 975 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 TXNRD3Q86VQ6 643 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 TMTC2Q8N394 836 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 ALG1Q9BT22 464 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 TNMDQ9H2S6 317 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 RTEL1Q9NZ71 1219 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 LEMD3Q9Y2U8 911 aa16.34■□□□□ 0.21
RAB3IP-216ENST00000552199 GYS1P13807 737 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms