RNA–Protein interactions for RNA: ENST00000551640.5

RFX4-209, Transcript of regulatory factor X4, humanhuman

TSL 5

Gene RFX4, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-209ENST00000551640 EMILIN2Q9BXX0 1053 aa7.47□□□□□ -1.21
RFX4-209ENST00000551640 SAMM50Q9Y512 469 aa7.47□□□□□ -1.21
RFX4-209ENST00000551640 FAM221AA4D161 298 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 ZNF862O60290 1169 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 F13A1P00488 732 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 CYP11A1P05108 521 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 CRKP46108 304 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 GJA8P48165 433 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 CDK8P49336 464 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.46□□□□□ -1.22
RFX4-209ENST00000551640 KIAA0825Q8IV33 1275 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 FBXO27Q8NI29 283 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 DDX54Q8TDD1 881 aaKnown RBP7.46□□□□□ -1.22
RFX4-209ENST00000551640 GPBAR1Q8TDU6 330 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 USP26Q9BXU7 913 aa7.46□□□□□ -1.22
RFX4-209ENST00000551640 LIG1P18858 919 aa7.45□□□□□ -1.22
RFX4-209ENST00000551640 COL8A1P27658 744 aa7.45□□□□□ -1.22
RFX4-209ENST00000551640 LRRC14Q15048 493 aa7.45□□□□□ -1.22
RFX4-209ENST00000551640 SNAP47Q5SQN1 464 aa7.45□□□□□ -1.22
RFX4-209ENST00000551640 SHISA2Q6UWI4 295 aa7.45□□□□□ -1.22
RFX4-209ENST00000551640 JARID2Q92833 1246 aaPredicted RBP7.45□□□□□ -1.22
RFX4-209ENST00000551640 CORO1BQ9BR76 489 aa7.45□□□□□ -1.22
RFX4-209ENST00000551640 MIR1-1HGQ9H1L0 117 aa7.45□□□□□ -1.22
RFX4-209ENST00000551640 UBP1Q9NZI7 540 aa7.45□□□□□ -1.22
RFX4-209ENST00000551640 INPP5FQ9Y2H2 1132 aa7.45□□□□□ -1.22
RFX4-209ENST00000551640 NACADO15069 1562 aa7.45□□□□□ -1.22
RFX4-209ENST00000551640 TRIM37O94972 964 aa7.44□□□□□ -1.22
RFX4-209ENST00000551640 RAC1P63000 192 aa7.44□□□□□ -1.22
RFX4-209ENST00000551640 TRIM28Q13263 835 aaKnown RBP7.44□□□□□ -1.22
RFX4-209ENST00000551640 GRIK4Q16099 956 aa7.44□□□□□ -1.22
RFX4-209ENST00000551640 GATAD2BQ8WXI9 593 aa7.44□□□□□ -1.22
RFX4-209ENST00000551640 NT5C1AQ9BXI3 368 aa7.44□□□□□ -1.22
RFX4-209ENST00000551640 SUPT16HQ9Y5B9 1047 aaKnown RBP7.44□□□□□ -1.22
RFX4-209ENST00000551640 CILPO75339 1184 aa7.43□□□□□ -1.22
RFX4-209ENST00000551640 INSM1Q01101 510 aaPredicted RBP7.43□□□□□ -1.22
RFX4-209ENST00000551640 FAM196AQ6ZSG2 479 aa7.43□□□□□ -1.22
RFX4-209ENST00000551640 KIAA1211Q6ZU35 1233 aa7.43□□□□□ -1.22
RFX4-209ENST00000551640 SLC43A3Q8NBI5 491 aa7.43□□□□□ -1.22
RFX4-209ENST00000551640 RASGRP4Q8TDF6 673 aa7.43□□□□□ -1.22
RFX4-209ENST00000551640 GPRASP2Q96D09 838 aa7.43□□□□□ -1.22
RFX4-209ENST00000551640 WDR18Q9BV38 432 aa7.43□□□□□ -1.22
RFX4-209ENST00000551640 KRT82Q9NSB4 513 aa7.43□□□□□ -1.22
RFX4-209ENST00000551640 TLR3O15455 904 aaKnown RBP7.42□□□□□ -1.22
RFX4-209ENST00000551640 IGSF3O75054 1194 aa7.42□□□□□ -1.22
RFX4-209ENST00000551640 PDE3AQ14432 1141 aa7.42□□□□□ -1.22
RFX4-209ENST00000551640 INPP5AQ14642 412 aa7.42□□□□□ -1.22
RFX4-209ENST00000551640 DUOXA2Q1HG44 320 aa7.42□□□□□ -1.22
RFX4-209ENST00000551640 CCDC84Q86UT8 332 aaPredicted RBP7.42□□□□□ -1.22
RFX4-209ENST00000551640 BEND7Q8N7W2 519 aaPredicted RBP7.42□□□□□ -1.22
RFX4-209ENST00000551640 PCDHGC5Q9Y5F6 944 aa7.42□□□□□ -1.22
RFX4-209ENST00000551640 ELNP15502 786 aa7.41□□□□□ -1.22
RFX4-209ENST00000551640 ATF4P18848 351 aaPredicted RBP7.41□□□□□ -1.22
RFX4-209ENST00000551640 LMNB1P20700 586 aa7.41□□□□□ -1.22
RFX4-209ENST00000551640 KIF4BQ2VIQ3 1234 aa7.41□□□□□ -1.22
RFX4-209ENST00000551640 SCARA3Q6AZY7 606 aa7.41□□□□□ -1.22
RFX4-209ENST00000551640 IGF2-ASQ6U949 168 aa7.41□□□□□ -1.22
RFX4-209ENST00000551640 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.41□□□□□ -1.22
RFX4-209ENST00000551640 AGGF1Q8N302 714 aaeCLIP7.41□□□□□ -1.22
RFX4-209ENST00000551640 GMLQ99445 158 aa7.41□□□□□ -1.22
RFX4-209ENST00000551640 TMPRSS13Q9BYE2 586 aa7.41□□□□□ -1.22
RFX4-209ENST00000551640 PCDHA4Q9UN74 947 aa7.41□□□□□ -1.22
RFX4-209ENST00000551640 EIF4EBP3O60516 100 aaPredicted RBP7.4□□□□□ -1.22
RFX4-209ENST00000551640 AOC2O75106 756 aa7.4□□□□□ -1.22
RFX4-209ENST00000551640 EXOSC6Q5RKV6 272 aaKnown RBP7.4□□□□□ -1.22
RFX4-209ENST00000551640 LRFN4Q6PJG9 635 aa7.4□□□□□ -1.22
RFX4-209ENST00000551640 ACAD11Q709F0 780 aa7.4□□□□□ -1.22
RFX4-209ENST00000551640 PODNQ7Z5L7 613 aa7.4□□□□□ -1.22
RFX4-209ENST00000551640 SLITRK4Q8IW52 837 aa7.4□□□□□ -1.22
RFX4-209ENST00000551640 LRRC3Q9BY71 257 aa7.4□□□□□ -1.22
RFX4-209ENST00000551640 GINM1Q9NU53 330 aa7.4□□□□□ -1.22
RFX4-209ENST00000551640 NOP53Q9NZM5 478 aaKnown RBP7.4□□□□□ -1.22
RFX4-209ENST00000551640 POLR3KQ9Y2Y1 108 aaPredicted RBP7.4□□□□□ -1.22
RFX4-209ENST00000551640 SPDYE3A6NKU9 549 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 GFRA2O00451 464 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 PIK3R2O00459 728 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 ALX3O95076 343 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 DNAJA1P31689 397 aaKnown RBP7.39□□□□□ -1.23
RFX4-209ENST00000551640 RPL6Q02878 288 aaKnown RBP7.39□□□□□ -1.23
RFX4-209ENST00000551640 APOBRQ0VD83 1088 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 MPP2Q14168 576 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 SEZ6Q53EL9 994 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 PRRT3Q5FWE3 981 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 NKD1Q969G9 470 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 PLPPR2Q96GM1 343 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 ACSBG1Q96GR2 724 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 RUSC1Q9BVN2 902 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 PPP1R9AQ9ULJ8 1098 aa7.39□□□□□ -1.23
RFX4-209ENST00000551640 ROBO2Q9HCK4 1378 aa7.38□□□□□ -1.23
RFX4-209ENST00000551640 MEGF11A6BM72 1044 aa7.38□□□□□ -1.23
RFX4-209ENST00000551640 DCDC2CA8MYV0 355 aa7.38□□□□□ -1.23
RFX4-209ENST00000551640 F8W735 103 aaPredicted RBP7.38□□□□□ -1.23
RFX4-209ENST00000551640 TMPRSS2O15393 492 aa7.38□□□□□ -1.23
RFX4-209ENST00000551640 FGRP09769 529 aa7.38□□□□□ -1.23
RFX4-209ENST00000551640 SPATA31C1P0DKV0 1188 aa7.38□□□□□ -1.23
RFX4-209ENST00000551640 ZC3H12AQ5D1E8 599 aaKnown RBP7.38□□□□□ -1.23
RFX4-209ENST00000551640 REC114Q7Z4M0 266 aa7.38□□□□□ -1.23
RFX4-209ENST00000551640 MCF2L2Q86YR7 1114 aa7.38□□□□□ -1.23
RFX4-209ENST00000551640 SREK1Q8WXA9 508 aaKnown RBP7.38□□□□□ -1.23
RFX4-209ENST00000551640 SCARF2Q96GP6 870 aaPredicted RBP7.38□□□□□ -1.23
RFX4-209ENST00000551640 MRPL18Q9H0U6 180 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms