RNA–Protein interactions for RNA: ENST00000551640.5

RFX4-209, Transcript of regulatory factor X4, humanhuman

TSL 5

Gene RFX4, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-209ENST00000551640 AEBP2Q6ZN18 517 aaPredicted RBP22.18■■□□□ 1.14
RFX4-209ENST00000551640 CHIC1Q5VXU3 224 aa21.89■■□□□ 1.09
RFX4-209ENST00000551640 PHF23Q9BUL5 403 aaPredicted RBP19.37■□□□□ 0.69
RFX4-209ENST00000551640 SENP3Q9H4L4 574 aaPredicted RBP18.61■□□□□ 0.57
RFX4-209ENST00000551640 PLPPR3Q6T4P5 718 aa17.85■□□□□ 0.45
RFX4-209ENST00000551640 FOXD1Q16676 465 aa17.33■□□□□ 0.36
RFX4-209ENST00000551640 PPP6R1Q9UPN7 881 aa16.99■□□□□ 0.31
RFX4-209ENST00000551640 ADRA2BP18089 450 aa16.96■□□□□ 0.31
RFX4-209ENST00000551640 PIAS4Q8N2W9 510 aaPredicted RBP16.36■□□□□ 0.21
RFX4-209ENST00000551640 KCNA4P22459 653 aa15.88■□□□□ 0.13
RFX4-209ENST00000551640 PPP4R3CPQ6ZMV5 832 aa15.83■□□□□ 0.12
RFX4-209ENST00000551640 MSH5O43196 834 aa15.73■□□□□ 0.11
RFX4-209ENST00000551640 NCBP3Q53F19 620 aaKnown RBP15.4■□□□□ 0.06
RFX4-209ENST00000551640 SCAF1Q9H7N4 1312 aaKnown RBP15.34■□□□□ 0.05
RFX4-209ENST00000551640 MAPK8IP2Q13387 824 aaPredicted RBP15.32■□□□□ 0.04
RFX4-209ENST00000551640 NPM3O75607 178 aaKnown RBP15.3■□□□□ 0.04
RFX4-209ENST00000551640 CNKSR2Q8WXI2 1034 aa15.27■□□□□ 0.04
RFX4-209ENST00000551640 SLC4A1APQ9BWU0 796 aaKnown RBP15.1■□□□□ 0.01
RFX4-209ENST00000551640 EHMT2Q96KQ7 1210 aa15.08■□□□□ 0
RFX4-209ENST00000551640 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
RFX4-209ENST00000551640 RNF216Q9NWF9 866 aaPredicted RBP14.89□□□□□ -0.03
RFX4-209ENST00000551640 CSRNP3Q8WYN3 585 aa14.81□□□□□ -0.04
RFX4-209ENST00000551640 HOXD11P31277 338 aaPredicted RBP14.78□□□□□ -0.04
RFX4-209ENST00000551640 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.05
RFX4-209ENST00000551640 ZBTB22O15209 634 aa14.67□□□□□ -0.06
RFX4-209ENST00000551640 FOXD4L1Q9NU39 408 aa14.45□□□□□ -0.1
RFX4-209ENST00000551640 SLC4A2P04920 1241 aa14.42□□□□□ -0.1
RFX4-209ENST00000551640 DCAF8L1A6NGE4 600 aa14.24□□□□□ -0.13
RFX4-209ENST00000551640 MYCNP04198 464 aaPredicted RBP14.06□□□□□ -0.16
RFX4-209ENST00000551640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.02□□□□□ -0.17
RFX4-209ENST00000551640 U3KPZ7 1027 aaPredicted RBP13.92□□□□□ -0.18
RFX4-209ENST00000551640 ATXN8OSP0DMR3 200 aa13.87□□□□□ -0.19
RFX4-209ENST00000551640 POTEDQ86YR6 584 aa13.85□□□□□ -0.19
RFX4-209ENST00000551640 ATF5Q9Y2D1 282 aaPredicted RBP13.8□□□□□ -0.2
RFX4-209ENST00000551640 SAMD1Q6SPF0 538 aaPredicted RBP13.7□□□□□ -0.22
RFX4-209ENST00000551640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.69□□□□□ -0.22
RFX4-209ENST00000551640 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
RFX4-209ENST00000551640 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
RFX4-209ENST00000551640 SPINK5Q9NQ38 1064 aaPredicted RBP13.46□□□□□ -0.25
RFX4-209ENST00000551640 APLP2Q06481 763 aa13.44□□□□□ -0.26
RFX4-209ENST00000551640 ZNF219Q9P2Y4 722 aaPredicted RBP13.44□□□□□ -0.26
RFX4-209ENST00000551640 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
RFX4-209ENST00000551640 TRHP20396 242 aaPredicted RBP13.34□□□□□ -0.27
RFX4-209ENST00000551640 FKBP8Q14318 412 aa13.31□□□□□ -0.28
RFX4-209ENST00000551640 CAPN15O75808 1086 aa13.3□□□□□ -0.28
RFX4-209ENST00000551640 POLA2Q14181 598 aa13.21□□□□□ -0.29
RFX4-209ENST00000551640 MKRN4PQ13434 485 aaPredicted RBP13.2□□□□□ -0.3
RFX4-209ENST00000551640 ABCB7O75027 752 aa13.13□□□□□ -0.31
RFX4-209ENST00000551640 DSG3P32926 999 aa13.06□□□□□ -0.32
RFX4-209ENST00000551640 FBLN2P98095 1184 aa13.01□□□□□ -0.33
RFX4-209ENST00000551640 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
RFX4-209ENST00000551640 CACNB1Q02641 598 aaPredicted RBP12.95□□□□□ -0.34
RFX4-209ENST00000551640 ZBTB12Q9Y330 459 aaPredicted RBP12.89□□□□□ -0.35
RFX4-209ENST00000551640 PROM2Q8N271 834 aa12.85□□□□□ -0.35
RFX4-209ENST00000551640 OSCARQ8IYS5 282 aa12.75□□□□□ -0.37
RFX4-209ENST00000551640 RTN4Q9NQC3 1192 aaKnown RBP12.73□□□□□ -0.37
RFX4-209ENST00000551640 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
RFX4-209ENST00000551640 FBXO3Q9UK99 471 aa12.65□□□□□ -0.38
RFX4-209ENST00000551640 SPDYE2BA6NHP3 402 aa12.64□□□□□ -0.39
RFX4-209ENST00000551640 SPDYE6P0CI01 402 aa12.64□□□□□ -0.39
RFX4-209ENST00000551640 SPDYE2Q495Y8 402 aa12.64□□□□□ -0.39
RFX4-209ENST00000551640 AMER1Q5JTC6 1135 aaPredicted RBP12.64□□□□□ -0.39
RFX4-209ENST00000551640 SSUH2Q9Y2M2 353 aa12.63□□□□□ -0.39
RFX4-209ENST00000551640 VASPP50552 380 aaPredicted RBP12.55□□□□□ -0.4
RFX4-209ENST00000551640 PABPN1Q86U42 306 aaKnown RBP eCLIP12.53□□□□□ -0.4
RFX4-209ENST00000551640 IFNLR1Q8IU57 520 aaPredicted RBP12.46□□□□□ -0.41
RFX4-209ENST00000551640 STAG3Q9UJ98 1225 aa12.36□□□□□ -0.43
RFX4-209ENST00000551640 RBM42Q9BTD8 480 aaKnown RBP12.31□□□□□ -0.44
RFX4-209ENST00000551640 AKT1S1Q96B36 256 aa12.29□□□□□ -0.44
RFX4-209ENST00000551640 PLCD3Q8N3E9 789 aa12.24□□□□□ -0.45
RFX4-209ENST00000551640 MIER1Q8N108 512 aa12.23□□□□□ -0.45
RFX4-209ENST00000551640 KLHL34Q8N239 644 aa12.21□□□□□ -0.45
RFX4-209ENST00000551640 REM2Q8IYK8 340 aaPredicted RBP12.2□□□□□ -0.46
RFX4-209ENST00000551640 PKD2Q13563 968 aa12.17□□□□□ -0.46
RFX4-209ENST00000551640 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
RFX4-209ENST00000551640 SPOCK2Q92563 424 aa12.17□□□□□ -0.46
RFX4-209ENST00000551640 CLEC11AQ9Y240 323 aa12.14□□□□□ -0.47
RFX4-209ENST00000551640 PITPNM1O00562 1244 aa12.08□□□□□ -0.48
RFX4-209ENST00000551640 PRR29P0C7W0 189 aa12.06□□□□□ -0.48
RFX4-209ENST00000551640 CREBZFQ9NS37 354 aa12.06□□□□□ -0.48
RFX4-209ENST00000551640 PLEKHG5O94827 1062 aa12.03□□□□□ -0.48
RFX4-209ENST00000551640 ZBTB47Q9UFB7 747 aaPredicted RBP12.01□□□□□ -0.49
RFX4-209ENST00000551640 MNX1P50219 401 aaPredicted RBP12□□□□□ -0.49
RFX4-209ENST00000551640 ECM2O94769 699 aaPredicted RBP11.97□□□□□ -0.49
RFX4-209ENST00000551640 SLC24A1O60721 1099 aa11.96□□□□□ -0.49
RFX4-209ENST00000551640 NUBP1P53384 320 aa11.96□□□□□ -0.49
RFX4-209ENST00000551640 CIZ1Q9ULV3 898 aaPredicted RBP11.94□□□□□ -0.5
RFX4-209ENST00000551640 RGL2O15211 777 aa11.91□□□□□ -0.5
RFX4-209ENST00000551640 DCAF8L2P0C7V8 631 aa11.91□□□□□ -0.5
RFX4-209ENST00000551640 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
RFX4-209ENST00000551640 RASEFQ8IZ41 740 aa11.84□□□□□ -0.51
RFX4-209ENST00000551640 NPM1P06748 294 aaKnown RBP eCLIP11.82□□□□□ -0.52
RFX4-209ENST00000551640 GSE1Q14687 1217 aa11.81□□□□□ -0.52
RFX4-209ENST00000551640 DCAF8Q5TAQ9 597 aa11.81□□□□□ -0.52
RFX4-209ENST00000551640 FXR2P51116 673 aaKnown RBP eCLIP11.79□□□□□ -0.52
RFX4-209ENST00000551640 RNF25Q96BH1 459 aaPredicted RBP11.78□□□□□ -0.52
RFX4-209ENST00000551640 TRIM41Q8WV44 630 aa11.76□□□□□ -0.53
RFX4-209ENST00000551640 PRKAR2AP13861 404 aaKnown RBP11.75□□□□□ -0.53
RFX4-209ENST00000551640 PLCB2Q00722 1185 aa11.75□□□□□ -0.53
RFX4-209ENST00000551640 FAM212AQ96EL1 285 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms