RNA–Protein interactions for RNA: ENST00000550929.5

LETMD1-228, Transcript of LETM1 domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LETMD1, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-228ENST00000550929 COL1A1P02452 1464 aaPredicted RBP11.32□□□□□ -0.6
LETMD1-228ENST00000550929 AKAP11Q9UKA4 1901 aa11.31□□□□□ -0.6
LETMD1-228ENST00000550929 MANSC4A6NHS7 340 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-228ENST00000550929 IGF2BP3O00425 579 aaKnown RBP eCLIP11.31□□□□□ -0.6
LETMD1-228ENST00000550929 UBTFL1P0CB47 393 aaPredicted RBP11.31□□□□□ -0.6
LETMD1-228ENST00000550929 TNFAIP1Q13829 316 aa11.31□□□□□ -0.6
LETMD1-228ENST00000550929 PUM3Q15397 648 aaKnown RBP11.31□□□□□ -0.6
LETMD1-228ENST00000550929 TEPSINQ96N21 525 aa11.31□□□□□ -0.6
LETMD1-228ENST00000550929 HPS5Q9UPZ3 1129 aa11.31□□□□□ -0.6
LETMD1-228ENST00000550929 PA2G4Q9UQ80 394 aaKnown RBP11.31□□□□□ -0.6
LETMD1-228ENST00000550929 FKTNO75072 461 aa11.3□□□□□ -0.6
LETMD1-228ENST00000550929 SLC5A1P13866 664 aa11.3□□□□□ -0.6
LETMD1-228ENST00000550929 ATG9AQ7Z3C6 839 aa11.3□□□□□ -0.6
LETMD1-228ENST00000550929 ANKRD13AQ8IZ07 590 aa11.3□□□□□ -0.6
LETMD1-228ENST00000550929 TBC1D22AQ8WUA7 517 aa11.3□□□□□ -0.6
LETMD1-228ENST00000550929 OCEL1Q9H607 264 aa11.3□□□□□ -0.6
LETMD1-228ENST00000550929 LRRFIP2Q9Y608 721 aaKnown RBP11.3□□□□□ -0.6
LETMD1-228ENST00000550929 TNNI2P48788 182 aa11.29□□□□□ -0.6
LETMD1-228ENST00000550929 LPIN2Q92539 896 aa11.29□□□□□ -0.6
LETMD1-228ENST00000550929 TEKT1Q969V4 418 aa11.29□□□□□ -0.6
LETMD1-228ENST00000550929 OPTNQ96CV9 577 aa11.29□□□□□ -0.6
LETMD1-228ENST00000550929 ZBTB48P10074 688 aaPredicted RBP11.28□□□□□ -0.6
LETMD1-228ENST00000550929 RARSP54136 660 aaKnown RBP11.28□□□□□ -0.6
LETMD1-228ENST00000550929 INHBEP58166 350 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 MAP3K9P80192 1104 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.28□□□□□ -0.6
LETMD1-228ENST00000550929 MEIS3Q99687 375 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 PTPN18Q99952 460 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 API5Q9BZZ5 524 aaKnown RBP11.28□□□□□ -0.6
LETMD1-228ENST00000550929 CEP126Q9P2H0 1117 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 TNNQ9UQP3 1299 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 ALDH1A1P00352 501 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 HDLBPQ00341 1268 aaKnown RBP11.28□□□□□ -0.6
LETMD1-228ENST00000550929 CRHR2Q13324 411 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 VGLL4Q14135 290 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 ATP2B3Q16720 1220 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 APOBEC3HQ6NTF7 200 aaKnown RBP11.28□□□□□ -0.6
LETMD1-228ENST00000550929 ZDHHC15Q96MV8 337 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 TMOD2Q9NZR1 351 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 TRIM17Q9Y577 477 aa11.28□□□□□ -0.6
LETMD1-228ENST00000550929 CCER2I3L3R5 266 aa11.27□□□□□ -0.61
LETMD1-228ENST00000550929 PRDX5P30044 214 aa11.27□□□□□ -0.61
LETMD1-228ENST00000550929 ADORA1P30542 326 aa11.27□□□□□ -0.61
LETMD1-228ENST00000550929 PHKA1P46020 1223 aa11.27□□□□□ -0.61
LETMD1-228ENST00000550929 TCP10Q12799 353 aa11.27□□□□□ -0.61
LETMD1-228ENST00000550929 DIXDC1Q155Q3 683 aa11.27□□□□□ -0.61
LETMD1-228ENST00000550929 PKN2Q16513 984 aaKnown RBP11.27□□□□□ -0.61
LETMD1-228ENST00000550929 FBXO46Q6PJ61 603 aaPredicted RBP11.27□□□□□ -0.61
LETMD1-228ENST00000550929 MIGA2Q7L4E1 593 aa11.27□□□□□ -0.61
LETMD1-228ENST00000550929 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.27□□□□□ -0.61
LETMD1-228ENST00000550929 CD99L2Q8TCZ2 262 aa11.27□□□□□ -0.61
LETMD1-228ENST00000550929 CFHR5Q9BXR6 569 aa11.27□□□□□ -0.61
LETMD1-228ENST00000550929 CSADQ9Y600 493 aa11.27□□□□□ -0.61
LETMD1-228ENST00000550929 UNCXA6NJT0 531 aa11.26□□□□□ -0.61
LETMD1-228ENST00000550929 CT47B1P0C2W7 299 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-228ENST00000550929 TIMM10P62072 90 aa11.26□□□□□ -0.61
LETMD1-228ENST00000550929 NOM1Q5C9Z4 860 aaKnown RBP11.26□□□□□ -0.61
LETMD1-228ENST00000550929 OTUD7BQ6GQQ9 843 aa11.26□□□□□ -0.61
LETMD1-228ENST00000550929 HHIPL2Q6UWX4 724 aa11.26□□□□□ -0.61
LETMD1-228ENST00000550929 WDR66Q8TBY9 1149 aa11.26□□□□□ -0.61
LETMD1-228ENST00000550929 BRI3BPQ8WY22 251 aa11.26□□□□□ -0.61
LETMD1-228ENST00000550929 FRAT1Q92837 279 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-228ENST00000550929 ZKSCAN4Q969J2 545 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-228ENST00000550929 FAM163AQ96GL9 167 aaPredicted RBP11.26□□□□□ -0.61
LETMD1-228ENST00000550929 MS4A4AQ96JQ5 239 aa11.26□□□□□ -0.61
LETMD1-228ENST00000550929 WRNIP1Q96S55 665 aa11.26□□□□□ -0.61
LETMD1-228ENST00000550929 MRIQ9BWK5 157 aa11.26□□□□□ -0.61
LETMD1-228ENST00000550929 DAGLAQ9Y4D2 1042 aa11.26□□□□□ -0.61
LETMD1-228ENST00000550929 ECM29Q5VYK3 1845 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 MAST3O60307 1309 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 KIF16BQ96L93 1317 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 CCL15-CCL14A0A0B4J2E2 113 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 BCAR3O75815 825 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 CIAO1O76071 339 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 ECM2O94769 699 aaPredicted RBP11.25□□□□□ -0.61
LETMD1-228ENST00000550929 IL15P40933 162 aaPredicted RBP11.25□□□□□ -0.61
LETMD1-228ENST00000550929 CAP1Q01518 475 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 CCL15Q16663 113 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 CDC42EP5Q6NZY7 148 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 OTOP1Q7RTM1 612 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 CLUAP1Q96AJ1 413 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 SUGT1Q9Y2Z0 365 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 SNCAIPQ9Y6H5 919 aa11.25□□□□□ -0.61
LETMD1-228ENST00000550929 TESPA1A2RU30 521 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-228ENST00000550929 LDHBP07195 334 aaKnown RBP11.24□□□□□ -0.61
LETMD1-228ENST00000550929 INPP5BP32019 993 aa11.24□□□□□ -0.61
LETMD1-228ENST00000550929 PSEN1P49768 467 aa11.24□□□□□ -0.61
LETMD1-228ENST00000550929 NFIAQ12857 509 aa11.24□□□□□ -0.61
LETMD1-228ENST00000550929 TAF1CQ15572 869 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-228ENST00000550929 CCDC102BQ68D86 513 aa11.24□□□□□ -0.61
LETMD1-228ENST00000550929 INTS3Q68E01 1043 aaKnown RBP11.24□□□□□ -0.61
LETMD1-228ENST00000550929 FAM83AQ86UY5 434 aa11.24□□□□□ -0.61
LETMD1-228ENST00000550929 FAM43AQ8N2R8 423 aa11.24□□□□□ -0.61
LETMD1-228ENST00000550929 PDCD7Q8N8D1 485 aaKnown RBP11.24□□□□□ -0.61
LETMD1-228ENST00000550929 USP40Q9NVE5 1235 aa11.24□□□□□ -0.61
LETMD1-228ENST00000550929 GNL3LQ9NVN8 582 aaKnown RBP11.24□□□□□ -0.61
LETMD1-228ENST00000550929 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.24□□□□□ -0.61
LETMD1-228ENST00000550929 SRGAP3O43295 1099 aa11.23□□□□□ -0.61
LETMD1-228ENST00000550929 GTF2A2P52657 109 aa11.23□□□□□ -0.61
LETMD1-228ENST00000550929 SP3Q02447 781 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms