RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 JDP2Q8WYK2 163 aa7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 STK31Q9BXU1 1019 aa7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 NYXQ9GZU5 481 aa7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 NIP7Q9Y221 180 aaKnown RBP eCLIP7.79□□□□□ -1.16
DEPDC4-209ENST00000550587 TIAM2Q8IVF5 1701 aa7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 PPFIA3O75145 1194 aa7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 FKBP4Q02790 459 aaKnown RBP eCLIP7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 EAPPQ56P03 285 aaPredicted RBP7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 CCDC116Q8IYX3 515 aa7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 PANK1Q8TE04 598 aa7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 CRBNQ96SW2 442 aa7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 HACL1Q9UJ83 578 aa7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 DNMT3LQ9UJW3 386 aa7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 USP16Q9Y5T5 823 aa7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 UBR2Q8IWV8 1755 aa7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 PTPRCP08575 1304 aa7.78□□□□□ -1.16
DEPDC4-209ENST00000550587 TMEM88BA6NKF7 163 aa7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 FAM177BA6PVY3 158 aa7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 TCERG1O14776 1098 aaKnown RBP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 VSIG8P0DPA2 414 aa7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 RLBP1P12271 317 aa7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 LMOD1P29536 600 aaPredicted RBP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 EIF6P56537 245 aaKnown RBP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 CBLBQ13191 982 aa7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 HDGFL1Q5TGJ6 251 aa7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 CC2D2BQ6DHV5 1058 aa7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 FTSJ3Q8IY81 847 aaKnown RBP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 PROCA1Q8NCQ7 364 aaPredicted RBP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 RPGRQ92834 1020 aaKnown RBP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 GPKOWQ92917 476 aaPredicted RBP eCLIP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 API5Q9BZZ5 524 aaKnown RBP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 DBF4Q9UBU7 674 aaPredicted RBP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 MKRN1Q9UHC7 482 aaKnown RBP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 DICER1Q9UPY3 1922 aaKnown RBP7.77□□□□□ -1.17
DEPDC4-209ENST00000550587 EIF2S2P20042 333 aaKnown RBP7.76□□□□□ -1.17
DEPDC4-209ENST00000550587 KIF6Q6ZMV9 814 aa7.76□□□□□ -1.17
DEPDC4-209ENST00000550587 CLUAP1Q96AJ1 413 aa7.76□□□□□ -1.17
DEPDC4-209ENST00000550587 ARHGAP9Q9BRR9 750 aa7.76□□□□□ -1.17
DEPDC4-209ENST00000550587 TSEN34Q9BSV6 310 aaKnown RBP7.76□□□□□ -1.17
DEPDC4-209ENST00000550587 CHMP4BQ9H444 224 aaKnown RBP7.76□□□□□ -1.17
DEPDC4-209ENST00000550587 FKBPLQ9UIM3 349 aa7.76□□□□□ -1.17
DEPDC4-209ENST00000550587 COG6Q9Y2V7 657 aa7.76□□□□□ -1.17
DEPDC4-209ENST00000550587 FER1L6Q2WGJ9 1857 aa7.76□□□□□ -1.17
DEPDC4-209ENST00000550587 SCN7AQ01118 1682 aa7.76□□□□□ -1.17
DEPDC4-209ENST00000550587 PRAMEF22A3QJZ6 481 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 ERVV-1B6SEH8 477 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 EPHX2P34913 555 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 IARSP41252 1262 aaKnown RBP7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 PIP4K2AP48426 406 aaPredicted RBP7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 CTCFP49711 727 aaPredicted RBP7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 MVPQ14764 893 aaKnown RBP7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 NR6A1Q15406 480 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 SKIV2LQ15477 1246 aaKnown RBP7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 PPP1R26Q5T8A7 1209 aaPredicted RBP7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 INTS3Q68E01 1043 aaKnown RBP7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 PDXDC2PQ6P474 469 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 G2E3Q7L622 706 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 GPC2Q8N158 579 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 SYNE4Q8N205 404 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 TAF1DQ9H5J8 278 aaPredicted RBP7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 DDX21Q9NR30 783 aaKnown RBP eCLIP7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 ZNF277Q9NRM2 450 aaPredicted RBP7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 HYPKQ9NX55 129 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 DDX19BQ9UMR2 479 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 TNNQ9UQP3 1299 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 ABCC4O15439 1325 aa7.75□□□□□ -1.17
DEPDC4-209ENST00000550587 SCN4AP35499 1836 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 SLX4Q8IY92 1834 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 KLRG2A4D1S0 409 aaPredicted RBP7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 MAP2K1Q02750 393 aaPredicted RBP7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 FLIIQ13045 1269 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 DEFB115Q30KQ5 88 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 PPP1R42Q7Z4L9 355 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 CNTROBQ8N137 903 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 TMEM57Q8N5G2 664 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 C7orf43Q8WVR3 580 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 RBM17Q96I25 401 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 CCDC136Q96JN2 1154 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 FAM117AQ9C073 453 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 PRDM10Q9NQV6 1147 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 CHPF2Q9P2E5 772 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 ABT1Q9ULW3 272 aaKnown RBP7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 GJA3Q9Y6H8 435 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 CACNA1SQ13698 1873 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 ANKRD31Q8N7Z5 1873 aa7.74□□□□□ -1.17
DEPDC4-209ENST00000550587 CNTNAP1P78357 1384 aa7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 FIGNL2A6NMB9 653 aa7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 ZBTB7BO15156 539 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 FKBP5Q13451 457 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 ZBTB33Q86T24 672 aa7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 ITPRIPQ8IWB1 547 aa7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 LARGE2Q8N3Y3 721 aa7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 KCTD15Q96SI1 283 aaPredicted RBP7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 PSMD1Q99460 953 aa7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 OCSTAMPQ9BR26 566 aa7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 KDM4CQ9H3R0 1056 aa7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 PHAXQ9H814 394 aaKnown RBP7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 ZBTB40Q9NUA8 1239 aa7.73□□□□□ -1.17
DEPDC4-209ENST00000550587 BCORQ6W2J9 1755 aa7.72□□□□□ -1.17
DEPDC4-209ENST00000550587 ARFGEF2Q9Y6D5 1785 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms