RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	GOLGA6L4	A6NEF3	574 aa		13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	NPHP1	O15259	732 aa		13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	AOC2	O75106	756 aa		13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	MAP3K12	Q12852	859 aa		13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442		Q6ZUG5	572 aa		13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	NOL8	Q76FK4	1167 aa	Known RBP	13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	VGLL2	Q8N8G2	317 aa		13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	NCOA7	Q8NI08	942 aa		13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	JARID2	Q92833	1246 aa	Predicted RBP	13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	MPHOSPH8	Q99549	860 aa		13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	BCL2L12	Q9HB09	334 aa		13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	DDX19A	Q9NUU7	478 aa	Known RBP	13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	ZBTB1	Q9Y2K1	713 aa		13.87	□□□□□ -0.19
LETMD1-223	ENST00000550442	MYH3	P11055	1940 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442		E7EWF7	191 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442		H3BQV1	296 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	ZNF213	O14771	459 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	CDKL5	O76039	1030 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	FGFR2	P21802	821 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	IGHMBP2	P38935	993 aa	Known RBP	13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	RCAN1	P53805	252 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	STYK1	Q6J9G0	422 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	CPLX2	Q6PUV4	134 aa	Known RBP	13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	ZNF396	Q96N95	335 aa	Predicted RBP	13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	GNL3L	Q9NVN8	582 aa	Known RBP	13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	TMEM63C	Q9P1W3	806 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	TLL2	Q9Y6L7	1015 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	MAST3	O60307	1309 aa		13.86	□□□□□ -0.19
LETMD1-223	ENST00000550442	CTAGE5	O15320	804 aa		13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	TPM3	P06753	285 aa		13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	PC	P11498	1178 aa	Known RBP	13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	ADD2	P35612	726 aa		13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	PPP2R5B	Q15173	497 aa		13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	HLF	Q16534	295 aa		13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	CCDC93	Q567U6	631 aa		13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	RALYL	Q86SE5	291 aa	Known RBP	13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	TMTC2	Q8N394	836 aa		13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	TMEM87B	Q96K49	555 aa		13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	NYX	Q9GZU5	481 aa		13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	CNNM2	Q9H8M5	875 aa		13.85	□□□□□ -0.19
LETMD1-223	ENST00000550442	VPS37C	A5D8V6	355 aa	Predicted RBP	13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	ESPN	B1AK53	854 aa		13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	SEMA3E	O15041	775 aa		13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	LMOD1	P29536	600 aa	Predicted RBP	13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	WASHC4	Q2M389	1173 aa		13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	SLC10A5	Q5PT55	438 aa		13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	PRR5L	Q6MZQ0	368 aa		13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	MASTL	Q96GX5	879 aa		13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	ZNF594	Q96JF6	807 aa	Predicted RBP	13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	PUS3	Q9BZE2	481 aa	Known RBP	13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	NACAP1	Q9BZK3	213 aa		13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	GREM2	Q9H772	168 aa		13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	NUP98	P52948	1817 aa		13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	PDS5A	Q29RF7	1337 aa	Known RBP	13.84	□□□□□ -0.19
LETMD1-223	ENST00000550442	CCDC192	P0DO97	292 aa		13.83	□□□□□ -0.2
LETMD1-223	ENST00000550442	SF3B3	Q15393	1217 aa	Known RBP	13.83	□□□□□ -0.2
LETMD1-223	ENST00000550442	ZSCAN30	Q86W11	494 aa		13.83	□□□□□ -0.2
LETMD1-223	ENST00000550442	GPC2	Q8N158	579 aa		13.83	□□□□□ -0.2
LETMD1-223	ENST00000550442	CCDC24	Q8N4L8	307 aa		13.83	□□□□□ -0.2
LETMD1-223	ENST00000550442	OSBP2	Q969R2	916 aa		13.83	□□□□□ -0.2
LETMD1-223	ENST00000550442	EDC3	Q96F86	508 aa	Known RBP	13.83	□□□□□ -0.2
LETMD1-223	ENST00000550442	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.83	□□□□□ -0.2
LETMD1-223	ENST00000550442	CCDC39	Q9UFE4	941 aa		13.83	□□□□□ -0.2
LETMD1-223	ENST00000550442	RIC1	Q4ADV7	1423 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	SYCE3	A1L190	88 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	PATL2	C9JE40	543 aa	Known RBP	13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	CAMTA2	O94983	1202 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	LARGE1	O95461	756 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	FGA	P02671	866 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	ST5	P78524	1137 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	UBE4A	Q14139	1066 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	TBC1D9B	Q66K14	1250 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	CCDC102B	Q68D86	513 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	BRAP	Q7Z569	592 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	CNBD1	Q8NA66	436 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	BRF1	Q92994	677 aa		13.82	□□□□□ -0.2
LETMD1-223	ENST00000550442	GPAA1	O43292	621 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	SRGN	P10124	158 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	CPA1	P15085	419 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	GPT	P24298	496 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	ZAP70	P43403	619 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	DNM1	Q05193	864 aa	Known RBP	13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	FMR1	Q06787	632 aa	Known RBP eCLIP	13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	ST3GAL1	Q11201	340 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	SLC9C2	Q5TAH2	1124 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	CST9	Q5W186	159 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	NECAB1	Q8N987	351 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	SPATA32	Q96LK8	384 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	SEC62	Q99442	399 aa	Known RBP	13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	KRT23	Q9C075	422 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	RNF41	Q9H4P4	317 aa	Predicted RBP	13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	CNPY2	Q9Y2B0	182 aa		13.81	□□□□□ -0.2
LETMD1-223	ENST00000550442	FZD9	O00144	591 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	MSN	P26038	577 aa	Known RBP	13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	PDIA3	P30101	505 aa	Known RBP	13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	LIFR	P42702	1097 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	MCAM	P43121	646 aa		13.8	□□□□□ -0.2
LETMD1-223	ENST00000550442	SART3	Q15020	963 aa	Known RBP	13.8	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 109.3 ms