RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 PAG1Q9NWQ8 432 aa21.25■□□□□ 0.99
CDK4-207ENST00000550419 TLL2Q9Y6L7 1015 aa21.25■□□□□ 0.99
CDK4-207ENST00000550419 NDUFB9Q9Y6M9 179 aa21.25■□□□□ 0.99
CDK4-207ENST00000550419 RASSF10A6NK89 507 aa21.24■□□□□ 0.99
CDK4-207ENST00000550419 IDH1O75874 414 aaKnown RBP21.24■□□□□ 0.99
CDK4-207ENST00000550419 NF2P35240 595 aa21.24■□□□□ 0.99
CDK4-207ENST00000550419 NUCB1Q02818 461 aa21.24■□□□□ 0.99
CDK4-207ENST00000550419 SAPCD2Q86UD0 394 aa21.24■□□□□ 0.99
CDK4-207ENST00000550419 DNAJC5GQ8N7S2 189 aa21.24■□□□□ 0.99
CDK4-207ENST00000550419 C2orf69Q8N8R5 385 aa21.24■□□□□ 0.99
CDK4-207ENST00000550419 DNAJC2Q99543 621 aaKnown RBP21.24■□□□□ 0.99
CDK4-207ENST00000550419 IDI2Q9BXS1 227 aa21.24■□□□□ 0.99
CDK4-207ENST00000550419 GBA2Q9HCG7 927 aaPredicted RBP21.24■□□□□ 0.99
CDK4-207ENST00000550419 USP40Q9NVE5 1235 aa21.24■□□□□ 0.99
CDK4-207ENST00000550419 SCAF8Q9UPN6 1271 aaKnown RBP21.24■□□□□ 0.99
CDK4-207ENST00000550419 CNTNAP1P78357 1384 aa21.23■□□□□ 0.99
CDK4-207ENST00000550419 GOLIM4O00461 696 aa21.23■□□□□ 0.99
CDK4-207ENST00000550419 ERC2O15083 957 aa21.23■□□□□ 0.99
CDK4-207ENST00000550419 MX1P20591 662 aa21.23■□□□□ 0.99
CDK4-207ENST00000550419 BTDP43251 543 aa21.23■□□□□ 0.99
CDK4-207ENST00000550419 PPP4CP60510 307 aa21.23■□□□□ 0.99
CDK4-207ENST00000550419 SUPT20HL1Q3ZLR7 823 aa21.23■□□□□ 0.99
CDK4-207ENST00000550419 CERS3Q8IU89 383 aa21.23■□□□□ 0.99
CDK4-207ENST00000550419 ZNF408Q9H9D4 720 aa21.23■□□□□ 0.99
CDK4-207ENST00000550419 STAP2Q9UGK3 403 aa21.23■□□□□ 0.99
CDK4-207ENST00000550419 RPAP1Q9BWH6 1393 aaPredicted RBP21.23■□□□□ 0.99
CDK4-207ENST00000550419 TCP10L2B9ZVM9 353 aa21.22■□□□□ 0.99
CDK4-207ENST00000550419 NPM3O75607 178 aaKnown RBP21.22■□□□□ 0.99
CDK4-207ENST00000550419 BAG3O95817 575 aa21.22■□□□□ 0.99
CDK4-207ENST00000550419 RHBDL3P58872 404 aa21.22■□□□□ 0.99
CDK4-207ENST00000550419 HTRA3P83110 453 aa21.22■□□□□ 0.99
CDK4-207ENST00000550419 CHD1LQ86WJ1 897 aa21.22■□□□□ 0.99
CDK4-207ENST00000550419 TEPSINQ96N21 525 aa21.22■□□□□ 0.99
CDK4-207ENST00000550419 RFX7Q2KHR2 1363 aa21.22■□□□□ 0.99
CDK4-207ENST00000550419 PAPPA2Q9BXP8 1791 aa21.21■□□□□ 0.99
CDK4-207ENST00000550419 GLRX3O76003 335 aaKnown RBP21.21■□□□□ 0.99
CDK4-207ENST00000550419 PLCG2P16885 1265 aa21.21■□□□□ 0.99
CDK4-207ENST00000550419 CACNB3P54284 484 aa21.21■□□□□ 0.99
CDK4-207ENST00000550419 PRAMEF18Q5VWM3 479 aa21.21■□□□□ 0.99
CDK4-207ENST00000550419 PI4K2BQ8TCG2 481 aa21.21■□□□□ 0.99
CDK4-207ENST00000550419 OTUD7AQ8TE49 926 aaPredicted RBP21.21■□□□□ 0.99
CDK4-207ENST00000550419 FAM151AQ8WW52 585 aa21.21■□□□□ 0.99
CDK4-207ENST00000550419 NOL10Q9BSC4 688 aaKnown RBP21.21■□□□□ 0.99
CDK4-207ENST00000550419 ABT1Q9ULW3 272 aaKnown RBP21.21■□□□□ 0.99
CDK4-207ENST00000550419 ENTPD3O75355 529 aa21.2■□□□□ 0.98
CDK4-207ENST00000550419 MYO5AQ9Y4I1 1855 aaKnown RBP21.2■□□□□ 0.98
CDK4-207ENST00000550419 WDHD1O75717 1129 aaPredicted RBP21.19■□□□□ 0.98
CDK4-207ENST00000550419 CYP7A1P22680 504 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 NFIAQ12857 509 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 DEFB115Q30KQ5 88 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 NBPF12Q5TAG4 269 aaPredicted RBP21.19■□□□□ 0.98
CDK4-207ENST00000550419 SLC9C2Q5TAH2 1124 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 B4GALNT3Q6L9W6 998 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 ADGRA1Q86SQ6 560 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 MAGEB6Q8N7X4 407 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 KLRG1Q96E93 195 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 HOOK2Q96ED9 719 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 EDC3Q96F86 508 aaKnown RBP21.19■□□□□ 0.98
CDK4-207ENST00000550419 LNPKQ9C0E8 428 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.19■□□□□ 0.98
CDK4-207ENST00000550419 TMEM39BQ9GZU3 492 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 FAM198AQ9UFP1 575 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 SSC5DA1L4H1 1573 aa21.19■□□□□ 0.98
CDK4-207ENST00000550419 UNCXA6NJT0 531 aa21.18■□□□□ 0.98
CDK4-207ENST00000550419 PDE6AP16499 860 aa21.18■□□□□ 0.98
CDK4-207ENST00000550419 PDE1AP54750 535 aa21.18■□□□□ 0.98
CDK4-207ENST00000550419 MAP3K11Q16584 847 aa21.18■□□□□ 0.98
CDK4-207ENST00000550419 PPP1R12BO60237 982 aaPredicted RBP21.17■□□□□ 0.98
CDK4-207ENST00000550419 HUNKP57058 714 aa21.17■□□□□ 0.98
CDK4-207ENST00000550419 TSHZ3Q63HK5 1081 aa21.17■□□□□ 0.98
CDK4-207ENST00000550419 ZSCAN25Q6NSZ9 544 aa21.17■□□□□ 0.98
CDK4-207ENST00000550419 ARMC9Q7Z3E5 817 aa21.17■□□□□ 0.98
CDK4-207ENST00000550419 KBTBD3Q8NAB2 608 aa21.17■□□□□ 0.98
CDK4-207ENST00000550419 AATFQ9NY61 560 aaKnown RBP eCLIP21.17■□□□□ 0.98
CDK4-207ENST00000550419 COL2A1P02458 1487 aaPredicted RBP21.16■□□□□ 0.98
CDK4-207ENST00000550419 TCRBV5S4A2TA0A5A2 114 aa21.16■□□□□ 0.98
CDK4-207ENST00000550419 RGS3P49796 1198 aa21.16■□□□□ 0.98
CDK4-207ENST00000550419 OSBPL3Q9H4L5 887 aa21.16■□□□□ 0.98
CDK4-207ENST00000550419 ZNF532Q9HCE3 1301 aa21.15■□□□□ 0.98
CDK4-207ENST00000550419 NEFLP07196 543 aa21.15■□□□□ 0.98
CDK4-207ENST00000550419 ADD2P35612 726 aa21.15■□□□□ 0.98
CDK4-207ENST00000550419 ECE1P42892 770 aa21.15■□□□□ 0.98
CDK4-207ENST00000550419 UBE3CQ15386 1083 aa21.15■□□□□ 0.98
CDK4-207ENST00000550419 LDLRAD1Q5T700 205 aa21.15■□□□□ 0.98
CDK4-207ENST00000550419 TICAM2Q86XR7 235 aa21.15■□□□□ 0.98
CDK4-207ENST00000550419 TEX11Q8IYF3 940 aa21.15■□□□□ 0.98
CDK4-207ENST00000550419 SH3RF3Q8TEJ3 882 aaPredicted RBP21.15■□□□□ 0.98
CDK4-207ENST00000550419 MKRN1Q9UHC7 482 aaKnown RBP21.15■□□□□ 0.98
CDK4-207ENST00000550419 ATRNL1Q5VV63 1379 aa21.14■□□□□ 0.98
CDK4-207ENST00000550419 TCP10Q12799 353 aa21.14■□□□□ 0.97
CDK4-207ENST00000550419 LRRFIP1Q32MZ4 808 aaKnown RBP21.14■□□□□ 0.97
CDK4-207ENST00000550419 CDAN1Q8IWY9 1227 aa21.14■□□□□ 0.97
CDK4-207ENST00000550419 RIOK1Q9BRS2 568 aaKnown RBP21.14■□□□□ 0.97
CDK4-207ENST00000550419 DDX4Q9NQI0 724 aaKnown RBP21.14■□□□□ 0.97
CDK4-207ENST00000550419 USP2O75604 605 aaPredicted RBP21.13■□□□□ 0.97
CDK4-207ENST00000550419 ZFYP08048 801 aaPredicted RBP21.13■□□□□ 0.97
CDK4-207ENST00000550419 TTLL12Q14166 644 aaPredicted RBP21.13■□□□□ 0.97
CDK4-207ENST00000550419 RGMBQ6NW40 437 aa21.13■□□□□ 0.97
CDK4-207ENST00000550419 PLEKHM2Q8IWE5 1019 aa21.13■□□□□ 0.97
CDK4-207ENST00000550419 IREB2P48200 963 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms