RNA–Protein interactions for RNA: ENST00000550016.5

DDX54-207, Transcript of DEAD-box helicase 54, humanhuman

TSL 5

Gene DDX54, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-207ENST00000550016 TCP10L2B9ZVM9 353 aa23.54■■□□□ 1.36
DDX54-207ENST00000550016 GOLIM4O00461 696 aa23.54■■□□□ 1.36
DDX54-207ENST00000550016 TNNI2P48788 182 aa23.54■■□□□ 1.36
DDX54-207ENST00000550016 MAP3K12Q12852 859 aa23.54■■□□□ 1.36
DDX54-207ENST00000550016 RASA3Q14644 834 aa23.54■■□□□ 1.36
DDX54-207ENST00000550016 B4GALNT3Q6L9W6 998 aa23.54■■□□□ 1.36
DDX54-207ENST00000550016 PAG1Q9NWQ8 432 aa23.54■■□□□ 1.36
DDX54-207ENST00000550016 TTC41PQ6P2S7 1318 aa23.54■■□□□ 1.36
DDX54-207ENST00000550016 BTDP43251 543 aa23.53■■□□□ 1.36
DDX54-207ENST00000550016 CACNB3P54284 484 aa23.53■■□□□ 1.36
DDX54-207ENST00000550016 TMED8Q6PL24 325 aaPredicted RBP23.53■■□□□ 1.36
DDX54-207ENST00000550016 OTUD7AQ8TE49 926 aaPredicted RBP23.53■■□□□ 1.36
DDX54-207ENST00000550016 CDK5RAP2Q96SN8 1893 aa23.52■■□□□ 1.36
DDX54-207ENST00000550016 ERC2O15083 957 aa23.52■■□□□ 1.36
DDX54-207ENST00000550016 MX1P20591 662 aa23.52■■□□□ 1.36
DDX54-207ENST00000550016 NF2P35240 595 aa23.52■■□□□ 1.36
DDX54-207ENST00000550016 NUCB1Q02818 461 aa23.52■■□□□ 1.36
DDX54-207ENST00000550016 CHD1LQ86WJ1 897 aa23.52■■□□□ 1.36
DDX54-207ENST00000550016 C2orf69Q8N8R5 385 aa23.52■■□□□ 1.36
DDX54-207ENST00000550016 LNPKQ9C0E8 428 aa23.52■■□□□ 1.36
DDX54-207ENST00000550016 GBA2Q9HCG7 927 aaPredicted RBP23.52■■□□□ 1.36
DDX54-207ENST00000550016 ABT1Q9ULW3 272 aaKnown RBP23.52■■□□□ 1.36
DDX54-207ENST00000550016 TSHZ3Q63HK5 1081 aa23.51■■□□□ 1.35
DDX54-207ENST00000550016 FAM83AQ86UY5 434 aa23.51■■□□□ 1.35
DDX54-207ENST00000550016 EDC3Q96F86 508 aaKnown RBP23.51■■□□□ 1.35
DDX54-207ENST00000550016 NOL10Q9BSC4 688 aaKnown RBP23.51■■□□□ 1.35
DDX54-207ENST00000550016 SALL3Q9BXA9 1300 aa23.51■■□□□ 1.35
DDX54-207ENST00000550016 CNTNAP1P78357 1384 aa23.51■■□□□ 1.35
DDX54-207ENST00000550016 MAP4K4O95819 1239 aaPredicted RBP23.5■■□□□ 1.35
DDX54-207ENST00000550016 CYP7A1P22680 504 aa23.5■■□□□ 1.35
DDX54-207ENST00000550016 SUPT20HL1Q3ZLR7 823 aa23.5■■□□□ 1.35
DDX54-207ENST00000550016 MAGEB6Q8N7X4 407 aa23.5■■□□□ 1.35
DDX54-207ENST00000550016 STAP2Q9UGK3 403 aa23.5■■□□□ 1.35
DDX54-207ENST00000550016 TLL2Q9Y6L7 1015 aa23.5■■□□□ 1.35
DDX54-207ENST00000550016 PAPPA2Q9BXP8 1791 aa23.5■■□□□ 1.35
DDX54-207ENST00000550016 GLRX3O76003 335 aaKnown RBP23.49■■□□□ 1.35
DDX54-207ENST00000550016 BAG3O95817 575 aa23.49■■□□□ 1.35
DDX54-207ENST00000550016 NEFLP07196 543 aa23.49■■□□□ 1.35
DDX54-207ENST00000550016 FOCADQ5VW36 1801 aa23.49■■□□□ 1.35
DDX54-207ENST00000550016 RHBDL3P58872 404 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 PPP4CP60510 307 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 FKBP1BP68106 108 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 NBPF12Q5TAG4 269 aaPredicted RBP23.48■■□□□ 1.35
DDX54-207ENST00000550016 SLC9C2Q5TAH2 1124 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 ADGRA1Q86SQ6 560 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 SAPCD2Q86UD0 394 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 DNAJC5GQ8N7S2 189 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 PI4K2BQ8TCG2 481 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 FAM151AQ8WW52 585 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 IDI2Q9BXS1 227 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 TMEM39BQ9GZU3 492 aa23.48■■□□□ 1.35
DDX54-207ENST00000550016 PDE6AP16499 860 aa23.47■■□□□ 1.35
DDX54-207ENST00000550016 PLCG2P16885 1265 aa23.47■■□□□ 1.35
DDX54-207ENST00000550016 PDE1AP54750 535 aa23.47■■□□□ 1.35
DDX54-207ENST00000550016 NFIAQ12857 509 aa23.47■■□□□ 1.35
DDX54-207ENST00000550016 TEPSINQ96N21 525 aa23.47■■□□□ 1.35
DDX54-207ENST00000550016 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.47■■□□□ 1.357e-7■■■□□ 15.9
DDX54-207ENST00000550016 FAM198AQ9UFP1 575 aa23.47■■□□□ 1.35
DDX54-207ENST00000550016 RASSF10A6NK89 507 aa23.46■■□□□ 1.35
DDX54-207ENST00000550016 WDHD1O75717 1129 aaPredicted RBP23.46■■□□□ 1.35
DDX54-207ENST00000550016 TCP10Q12799 353 aa23.46■■□□□ 1.35
DDX54-207ENST00000550016 DEFB115Q30KQ5 88 aa23.46■■□□□ 1.35
DDX54-207ENST00000550016 AATFQ9NY61 560 aaKnown RBP eCLIP23.46■■□□□ 1.35
DDX54-207ENST00000550016 ENTPD3O75355 529 aa23.45■■□□□ 1.34
DDX54-207ENST00000550016 RGS3P49796 1198 aa23.45■■□□□ 1.34
DDX54-207ENST00000550016 TTLL12Q14166 644 aaPredicted RBP23.45■■□□□ 1.34
DDX54-207ENST00000550016 SH3RF3Q8TEJ3 882 aaPredicted RBP23.45■■□□□ 1.34
DDX54-207ENST00000550016 HHIPL1Q96JK4 782 aa23.45■■□□□ 1.34
DDX54-207ENST00000550016 MKRN1Q9UHC7 482 aaKnown RBP23.45■■□□□ 1.34
DDX54-207ENST00000550016 RFX7Q2KHR2 1363 aa23.44■■□□□ 1.34
DDX54-207ENST00000550016 RPAP1Q9BWH6 1393 aaPredicted RBP23.44■■□□□ 1.34
DDX54-207ENST00000550016 NPM3O75607 178 aaKnown RBP23.44■■□□□ 1.34
DDX54-207ENST00000550016 HUNKP57058 714 aa23.44■■□□□ 1.34
DDX54-207ENST00000550016 ARMC9Q7Z3E5 817 aa23.44■■□□□ 1.34
DDX54-207ENST00000550016 CERS3Q8IU89 383 aa23.44■■□□□ 1.34
DDX54-207ENST00000550016 TEX11Q8IYF3 940 aa23.44■■□□□ 1.34
DDX54-207ENST00000550016 KBTBD3Q8NAB2 608 aa23.44■■□□□ 1.34
DDX54-207ENST00000550016 SSC5DA1L4H1 1573 aa23.44■■□□□ 1.34
DDX54-207ENST00000550016 MYH1P12882 1939 aa23.43■■□□□ 1.34
DDX54-207ENST00000550016 ZNF532Q9HCE3 1301 aa23.43■■□□□ 1.34
DDX54-207ENST00000550016 TCRBV5S4A2TA0A5A2 114 aa23.43■■□□□ 1.34
DDX54-207ENST00000550016 PPP1R12BO60237 982 aaPredicted RBP23.43■■□□□ 1.34
DDX54-207ENST00000550016 ADD2P35612 726 aa23.43■■□□□ 1.34
DDX54-207ENST00000550016 PRKG1Q13976 671 aa23.43■■□□□ 1.34
DDX54-207ENST00000550016 ZSCAN25Q6NSZ9 544 aa23.43■■□□□ 1.34
DDX54-207ENST00000550016 CDAN1Q8IWY9 1227 aa23.43■■□□□ 1.34
DDX54-207ENST00000550016 KLRG1Q96E93 195 aa23.43■■□□□ 1.34
DDX54-207ENST00000550016 HOOK2Q96ED9 719 aa23.43■■□□□ 1.34
DDX54-207ENST00000550016 UBE2Q2LH0YL09 131 aa23.42■■□□□ 1.34
DDX54-207ENST00000550016 DYNLL1P63167 89 aaKnown RBP23.42■■□□□ 1.34
DDX54-207ENST00000550016 PICALMQ13492 652 aa23.42■■□□□ 1.34
DDX54-207ENST00000550016 MOB2Q70IA6 237 aa23.42■■□□□ 1.34
DDX54-207ENST00000550016 PLEKHM2Q8IWE5 1019 aa23.42■■□□□ 1.34
DDX54-207ENST00000550016 ZFPM1Q8IX07 1006 aa23.42■■□□□ 1.34
DDX54-207ENST00000550016 MIGA1Q8NAN2 632 aa23.42■■□□□ 1.34
DDX54-207ENST00000550016 DDX4Q9NQI0 724 aaKnown RBP23.42■■□□□ 1.34
DDX54-207ENST00000550016 ANGEL1Q9UNK9 670 aaKnown RBP23.41■■□□□ 1.34
DDX54-207ENST00000550016 MAGEB6P1A0A0J9YX57 407 aa23.4■■□□□ 1.34
DDX54-207ENST00000550016 USP2O75604 605 aaPredicted RBP23.4■■□□□ 1.34
DDX54-207ENST00000550016 UBE3CQ15386 1083 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms