RNA–Protein interactions for RNA: ENST00000549671.5

SYT1-208, Transcript of synaptotagmin 1, humanhuman

TSL 1 (best)

Gene SYT1, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYT1-208ENST00000549671 GOLGA3Q08378 1498 aa8.18□□□□□ -1.1
SYT1-208ENST00000549671 LOC100289279A0A1B0GTE1 492 aa8.17□□□□□ -1.1
SYT1-208ENST00000549671 PRR19A6NJB7 356 aa8.17□□□□□ -1.1
SYT1-208ENST00000549671 ESRRAP11474 423 aaPredicted RBP8.17□□□□□ -1.1
SYT1-208ENST00000549671 SPINK2P20155 84 aa8.17□□□□□ -1.1
SYT1-208ENST00000549671 SSTR4P31391 388 aa8.17□□□□□ -1.1
SYT1-208ENST00000549671 GRIK1P39086 918 aa8.17□□□□□ -1.1
SYT1-208ENST00000549671 CPSF6Q16630 551 aaKnown RBP eCLIP8.17□□□□□ -1.1
SYT1-208ENST00000549671 BEND4Q6ZU67 534 aa8.17□□□□□ -1.1
SYT1-208ENST00000549671 GALNT12Q8IXK2 581 aa8.17□□□□□ -1.1
SYT1-208ENST00000549671 NRSN2Q9GZP1 204 aa8.17□□□□□ -1.1
SYT1-208ENST00000549671 RAPGEF2Q9Y4G8 1499 aa8.17□□□□□ -1.1
SYT1-208ENST00000549671 FER1L4A9Z1Z3 1794 aa8.16□□□□□ -1.1
SYT1-208ENST00000549671 ATP10BO94823 1461 aa8.16□□□□□ -1.1
SYT1-208ENST00000549671 HGSNATQ68CP4 663 aa8.16□□□□□ -1.1
SYT1-208ENST00000549671 CCNJLQ8IV13 435 aa8.16□□□□□ -1.1
SYT1-208ENST00000549671 CYP4F12Q9HCS2 524 aa8.16□□□□□ -1.1
SYT1-208ENST00000549671 ARHGEF12Q9NZN5 1544 aa8.16□□□□□ -1.1
SYT1-208ENST00000549671 AKNAQ7Z591 1439 aa8.15□□□□□ -1.1
SYT1-208ENST00000549671 KRTAP9-6A0A140TA67 174 aa8.15□□□□□ -1.1
SYT1-208ENST00000549671 MED26O95402 600 aa8.15□□□□□ -1.1
SYT1-208ENST00000549671 ABL1P00519 1130 aa8.15□□□□□ -1.1
SYT1-208ENST00000549671 ZNF211Q13398 564 aaPredicted RBP8.15□□□□□ -1.1
SYT1-208ENST00000549671 ECM1Q16610 540 aa8.15□□□□□ -1.1
SYT1-208ENST00000549671 NUTM2GQ5VZR2 741 aa8.15□□□□□ -1.1
SYT1-208ENST00000549671 DTX1Q86Y01 620 aa8.15□□□□□ -1.1
SYT1-208ENST00000549671 LATS2Q9NRM7 1088 aa8.15□□□□□ -1.1
SYT1-208ENST00000549671 EFCAB5A4FU69 1503 aa8.14□□□□□ -1.11
SYT1-208ENST00000549671 DENND4BO75064 1496 aaPredicted RBP8.14□□□□□ -1.11
SYT1-208ENST00000549671 MAGI2Q86UL8 1455 aa8.14□□□□□ -1.11
SYT1-208ENST00000549671 NEFLP07196 543 aa8.14□□□□□ -1.11
SYT1-208ENST00000549671 MCTP1Q6DN14 999 aa8.14□□□□□ -1.11
SYT1-208ENST00000549671 ASAP3Q8TDY4 903 aa8.14□□□□□ -1.11
SYT1-208ENST00000549671 CITED4Q96RK1 184 aa8.14□□□□□ -1.11
SYT1-208ENST00000549671 ANO2Q9NQ90 1003 aa8.14□□□□□ -1.11
SYT1-208ENST00000549671 ZFYVE16Q7Z3T8 1539 aa8.13□□□□□ -1.11
SYT1-208ENST00000549671 GAS2O43903 313 aaKnown RBP8.13□□□□□ -1.11
SYT1-208ENST00000549671 MAP4P27816 1152 aaKnown RBP8.13□□□□□ -1.11
SYT1-208ENST00000549671 EXOSC6Q5RKV6 272 aaKnown RBP8.13□□□□□ -1.11
SYT1-208ENST00000549671 TCF12Q99081 682 aa8.13□□□□□ -1.11
SYT1-208ENST00000549671 CLEC4MQ9H2X3 399 aaPredicted RBP8.13□□□□□ -1.11
SYT1-208ENST00000549671 KCNF1Q9H3M0 494 aa8.13□□□□□ -1.11
SYT1-208ENST00000549671 CTTNBP2Q8WZ74 1663 aa8.13□□□□□ -1.11
SYT1-208ENST00000549671 A0A1W2PP55 124 aa8.12□□□□□ -1.11
SYT1-208ENST00000549671 DLGAP3O95886 979 aa8.12□□□□□ -1.11
SYT1-208ENST00000549671 ARHGAP4P98171 946 aa8.12□□□□□ -1.11
SYT1-208ENST00000549671 HP1BP3Q5SSJ5 553 aaPredicted RBP8.12□□□□□ -1.11
SYT1-208ENST00000549671 KIAA0319Q5VV43 1072 aa8.12□□□□□ -1.11
SYT1-208ENST00000549671 RETREG2Q8NC44 543 aa8.12□□□□□ -1.11
SYT1-208ENST00000549671 SHKBP1Q8TBC3 707 aa8.12□□□□□ -1.11
SYT1-208ENST00000549671 FAM129BQ96TA1 746 aa8.12□□□□□ -1.11
SYT1-208ENST00000549671 KRTAP4-12Q9BQ66 201 aa8.12□□□□□ -1.11
SYT1-208ENST00000549671 USP26Q9BXU7 913 aa8.12□□□□□ -1.11
SYT1-208ENST00000549671 BRPF3Q9ULD4 1205 aa8.12□□□□□ -1.11
SYT1-208ENST00000549671 CFAP74Q9C0B2 1584 aa8.11□□□□□ -1.11
SYT1-208ENST00000549671 A0A096LPE4 126 aa8.11□□□□□ -1.11
SYT1-208ENST00000549671 A0A1W2PPZ6 126 aa8.11□□□□□ -1.11
SYT1-208ENST00000549671 PDE3BQ13370 1112 aa8.11□□□□□ -1.11
SYT1-208ENST00000549671 EZH1Q92800 747 aaPredicted RBP8.11□□□□□ -1.11
SYT1-208ENST00000549671 ZFYVE1Q9HBF4 777 aa8.11□□□□□ -1.11
SYT1-208ENST00000549671 UHRF1BP1Q6BDS2 1440 aa8.11□□□□□ -1.11
SYT1-208ENST00000549671 MED1Q15648 1581 aaPredicted RBP8.1□□□□□ -1.11
SYT1-208ENST00000549671 H3BRB1 525 aa8.1□□□□□ -1.11
SYT1-208ENST00000549671 PTPN12Q05209 780 aaKnown RBP8.1□□□□□ -1.11
SYT1-208ENST00000549671 PCDH1Q08174 1060 aa8.1□□□□□ -1.11
SYT1-208ENST00000549671 SGO2Q562F6 1265 aa8.1□□□□□ -1.11
SYT1-208ENST00000549671 GLYCTKQ8IVS8 523 aa8.1□□□□□ -1.11
SYT1-208ENST00000549671 C12orf50Q8NA57 414 aaPredicted RBP8.1□□□□□ -1.11
SYT1-208ENST00000549671 GIMAP7Q8NHV1 300 aa8.1□□□□□ -1.11
SYT1-208ENST00000549671 TUT1Q9H6E5 874 aaKnown RBP8.1□□□□□ -1.11
SYT1-208ENST00000549671 LIN7BQ9HAP6 207 aa8.1□□□□□ -1.11
SYT1-208ENST00000549671 METTL12A8MUP2 240 aa8.09□□□□□ -1.11
SYT1-208ENST00000549671 NDUFB5O43674 189 aa8.09□□□□□ -1.11
SYT1-208ENST00000549671 B3GALT4O96024 378 aa8.09□□□□□ -1.11
SYT1-208ENST00000549671 CYP11A1P05108 521 aa8.09□□□□□ -1.11
SYT1-208ENST00000549671 ITPKAP23677 461 aa8.09□□□□□ -1.11
SYT1-208ENST00000549671 GRIA4P48058 902 aa8.09□□□□□ -1.11
SYT1-208ENST00000549671 GP2P55259 537 aaKnown RBP8.09□□□□□ -1.11
SYT1-208ENST00000549671 GSTM4Q03013 218 aa8.09□□□□□ -1.11
SYT1-208ENST00000549671 TXNDC2Q86VQ3 553 aa8.09□□□□□ -1.11
SYT1-208ENST00000549671 C2CD4AQ8NCU7 369 aaPredicted RBP8.09□□□□□ -1.11
SYT1-208ENST00000549671 PIM2Q9P1W9 311 aa8.09□□□□□ -1.11
SYT1-208ENST00000549671 SYNGAP1Q96PV0 1343 aa8.08□□□□□ -1.12
SYT1-208ENST00000549671 HECW1Q76N89 1606 aa8.08□□□□□ -1.12
SYT1-208ENST00000549671 IGHA2P01877 340 aa8.08□□□□□ -1.12
SYT1-208ENST00000549671 POLR3DP05423 398 aaPredicted RBP8.08□□□□□ -1.12
SYT1-208ENST00000549671 SERPINB4P48594 390 aa8.08□□□□□ -1.12
SYT1-208ENST00000549671 SOX4Q06945 474 aaPredicted RBP8.08□□□□□ -1.12
SYT1-208ENST00000549671 ZNF423Q2M1K9 1284 aa8.08□□□□□ -1.12
SYT1-208ENST00000549671 DNAJC25Q9H1X3 360 aa8.08□□□□□ -1.12
SYT1-208ENST00000549671 NCOA1Q15788 1441 aa8.08□□□□□ -1.12
SYT1-208ENST00000549671 FAM95CA0A1B0GW59 222 aa8.07□□□□□ -1.12
SYT1-208ENST00000549671 CPNE3O75131 537 aaKnown RBP8.07□□□□□ -1.12
SYT1-208ENST00000549671 PDE4CQ08493 712 aa8.07□□□□□ -1.12
SYT1-208ENST00000549671 PRPF40BQ6NWY9 871 aaKnown RBP8.07□□□□□ -1.12
SYT1-208ENST00000549671 DDX54Q8TDD1 881 aaKnown RBP8.07□□□□□ -1.12
SYT1-208ENST00000549671 METTL22Q9BUU2 404 aaPredicted RBP8.07□□□□□ -1.12
SYT1-208ENST00000549671 YIPF2Q9BWQ6 316 aa8.07□□□□□ -1.12
SYT1-208ENST00000549671 ZNF576Q9H609 170 aa8.07□□□□□ -1.12
SYT1-208ENST00000549671 OAS3Q9Y6K5 1087 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms