RNA–Protein interactions for RNA: ENST00000549655.5

BRF1-215, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,962 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-215ENST00000549655 DYNLL1P63167 89 aaKnown RBP22.49■■□□□ 1.19
BRF1-215ENST00000549655 GPSM2P81274 684 aa22.49■■□□□ 1.19
BRF1-215ENST00000549655 MFSD6Q6ZSS7 791 aa22.49■■□□□ 1.19
BRF1-215ENST00000549655 COL23A1Q86Y22 540 aaPredicted RBP22.49■■□□□ 1.19
BRF1-215ENST00000549655 CNNM2Q9H8M5 875 aa22.49■■□□□ 1.19
BRF1-215ENST00000549655 KIF3AQ9Y496 699 aa22.49■■□□□ 1.19
BRF1-215ENST00000549655 TIAM2Q8IVF5 1701 aa22.49■■□□□ 1.19
BRF1-215ENST00000549655 H3BQV1 296 aa22.49■■□□□ 1.19
BRF1-215ENST00000549655 SH2B2O14492 632 aaPredicted RBP22.49■■□□□ 1.19
BRF1-215ENST00000549655 HOXA10P31260 410 aaPredicted RBP22.49■■□□□ 1.19
BRF1-215ENST00000549655 IFFO2Q5TF58 517 aa22.49■■□□□ 1.19
BRF1-215ENST00000549655 STAG1Q8WVM7 1258 aa22.49■■□□□ 1.19
BRF1-215ENST00000549655 TMEM87BQ96K49 555 aa22.49■■□□□ 1.19
BRF1-215ENST00000549655 TMEM63CQ9P1W3 806 aa22.49■■□□□ 1.19
BRF1-215ENST00000549655 BBOX1O75936 387 aa22.48■■□□□ 1.19
BRF1-215ENST00000549655 PRDX5P30044 214 aa22.48■■□□□ 1.19
BRF1-215ENST00000549655 CSPP1Q1MSJ5 1256 aa22.48■■□□□ 1.19
BRF1-215ENST00000549655 KRT23Q9C075 422 aa22.48■■□□□ 1.19
BRF1-215ENST00000549655 JAG2Q9Y219 1238 aa22.48■■□□□ 1.19
BRF1-215ENST00000549655 KLRG2A4D1S0 409 aaPredicted RBP22.47■■□□□ 1.19
BRF1-215ENST00000549655 DHX16O60231 1041 aaKnown RBP22.47■■□□□ 1.19
BRF1-215ENST00000549655 ZNF445P59923 1031 aa22.47■■□□□ 1.19
BRF1-215ENST00000549655 NLGN1Q8N2Q7 840 aa22.47■■□□□ 1.19
BRF1-215ENST00000549655 IGDCC4Q8TDY8 1250 aa22.47■■□□□ 1.19
BRF1-215ENST00000549655 ZSWIM5Q9P217 1185 aa22.47■■□□□ 1.19
BRF1-215ENST00000549655 PPFIA3O75145 1194 aa22.47■■□□□ 1.19
BRF1-215ENST00000549655 KDM4AO75164 1064 aa22.47■■□□□ 1.19
BRF1-215ENST00000549655 XRCC6P12956 609 aaKnown RBP eCLIP22.47■■□□□ 1.192e-6■■□□□ 12.3
BRF1-215ENST00000549655 MRE11P49959 708 aa22.47■■□□□ 1.19
BRF1-215ENST00000549655 PPARAQ07869 468 aa22.47■■□□□ 1.19
BRF1-215ENST00000549655 FAM173BQ6P4H8 233 aa22.47■■□□□ 1.19
BRF1-215ENST00000549655 C15orf52Q6ZUT6 534 aaKnown RBP22.47■■□□□ 1.19
BRF1-215ENST00000549655 RAB11FIP4Q86YS3 637 aa22.47■■□□□ 1.19
BRF1-215ENST00000549655 KRT85P78386 507 aa22.46■■□□□ 1.19
BRF1-215ENST00000549655 ZNF804AQ7Z570 1209 aa22.46■■□□□ 1.19
BRF1-215ENST00000549655 TDRD7Q8NHU6 1098 aaKnown RBP22.46■■□□□ 1.19
BRF1-215ENST00000549655 GPR101Q96P66 508 aaPredicted RBP22.46■■□□□ 1.19
BRF1-215ENST00000549655 CRAMP1Q96RY5 1269 aa22.46■■□□□ 1.19
BRF1-215ENST00000549655 GRPEL1Q9HAV7 217 aa22.46■■□□□ 1.19
BRF1-215ENST00000549655 UFL1O94874 794 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 ATP2B4P23634 1241 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 UBE2HP62256 183 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 SPTY2D1Q68D10 685 aaPredicted RBP22.45■■□□□ 1.18
BRF1-215ENST00000549655 MINDY4BA8MYZ0 360 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 RESTQ13127 1097 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 TMEM67Q5HYA8 995 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 RRP12Q5JTH9 1297 aaKnown RBP22.45■■□□□ 1.18
BRF1-215ENST00000549655 WDR66Q8TBY9 1149 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 BRIP1Q9BX63 1249 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 RNF41Q9H4P4 317 aaPredicted RBP22.45■■□□□ 1.18
BRF1-215ENST00000549655 SENP2Q9HC62 589 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 TOMM22Q9NS69 142 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 GGA1Q9UJY5 639 aa22.45■■□□□ 1.18
BRF1-215ENST00000549655 CCDC88AQ3V6T2 1871 aa22.44■■□□□ 1.18
BRF1-215ENST00000549655 FDPSP14324 419 aaKnown RBP22.44■■□□□ 1.18
BRF1-215ENST00000549655 FOSBP53539 338 aa22.44■■□□□ 1.18
BRF1-215ENST00000549655 TMED8Q6PL24 325 aaPredicted RBP22.44■■□□□ 1.18
BRF1-215ENST00000549655 STK11IPQ8N1F8 1099 aa22.44■■□□□ 1.18
BRF1-215ENST00000549655 FLAD1Q8NFF5 587 aa22.44■■□□□ 1.18
BRF1-215ENST00000549655 LY9Q9HBG7 655 aa22.44■■□□□ 1.18
BRF1-215ENST00000549655 ANAPC4Q9UJX5 808 aa22.44■■□□□ 1.18
BRF1-215ENST00000549655 CPLX1O14810 134 aa22.43■■□□□ 1.18
BRF1-215ENST00000549655 ZSCAN16Q9H4T2 348 aaPredicted RBP22.43■■□□□ 1.18
BRF1-215ENST00000549655 AATFQ9NY61 560 aaKnown RBP eCLIP22.43■■□□□ 1.18
BRF1-215ENST00000549655 IFIT3O14879 490 aaKnown RBP22.43■■□□□ 1.18
BRF1-215ENST00000549655 APOA5Q6Q788 366 aa22.43■■□□□ 1.18
BRF1-215ENST00000549655 NFXL1Q6ZNB6 911 aa22.43■■□□□ 1.18
BRF1-215ENST00000549655 SGMS1Q86VZ5 419 aa22.43■■□□□ 1.18
BRF1-215ENST00000549655 DZIP1Q86YF9 867 aaKnown RBP22.43■■□□□ 1.18
BRF1-215ENST00000549655 SYAP1Q96A49 352 aaPredicted RBP22.43■■□□□ 1.18
BRF1-215ENST00000549655 MAST2Q6P0Q8 1798 aa22.43■■□□□ 1.18
BRF1-215ENST00000549655 LIFRP42702 1097 aa22.42■■□□□ 1.18
BRF1-215ENST00000549655 GIMAP6Q6P9H5 292 aa22.42■■□□□ 1.18
BRF1-215ENST00000549655 PODXL2Q9NZ53 605 aa22.42■■□□□ 1.18
BRF1-215ENST00000549655 LDHBP07195 334 aaKnown RBP22.41■■□□□ 1.18
BRF1-215ENST00000549655 METAP2P50579 478 aaKnown RBP eCLIP22.41■■□□□ 1.18
BRF1-215ENST00000549655 TPRNQ4KMQ1 711 aa22.41■■□□□ 1.18
BRF1-215ENST00000549655 BAZ2AQ9UIF9 1905 aaKnown RBP22.41■■□□□ 1.18
BRF1-215ENST00000549655 ANKRD31Q8N7Z5 1873 aa22.41■■□□□ 1.18
BRF1-215ENST00000549655 CRNKL1Q9BZJ0 848 aaKnown RBP22.41■■□□□ 1.18
BRF1-215ENST00000549655 TFIP11Q9UBB9 837 aaKnown RBP22.41■■□□□ 1.18
BRF1-215ENST00000549655 TTC6Q86TZ1 520 aa22.4■■□□□ 1.18
BRF1-215ENST00000549655 SCAND2PQ9GZW5 306 aaPredicted RBP22.4■■□□□ 1.18
BRF1-215ENST00000549655 CD209Q9NNX6 404 aa22.4■■□□□ 1.18
BRF1-215ENST00000549655 ORC3Q9UBD5 711 aaPredicted RBP22.4■■□□□ 1.18
BRF1-215ENST00000549655 POLLQ9UGP5 575 aa22.4■■□□□ 1.18
BRF1-215ENST00000549655 NRXN2Q9P2S2 1712 aa22.4■■□□□ 1.18
BRF1-215ENST00000549655 SYCE3A1L190 88 aa22.39■■□□□ 1.18
BRF1-215ENST00000549655 SMIM22K7EJ46 135 aa22.39■■□□□ 1.18
BRF1-215ENST00000549655 ZBTB43O43298 467 aa22.39■■□□□ 1.18
BRF1-215ENST00000549655 IGSF3O75054 1194 aa22.39■■□□□ 1.18
BRF1-215ENST00000549655 MMP10P09238 476 aa22.39■■□□□ 1.18
BRF1-215ENST00000549655 RXRAP19793 462 aa22.39■■□□□ 1.18
BRF1-215ENST00000549655 SART3Q15020 963 aaKnown RBP22.39■■□□□ 1.18
BRF1-215ENST00000549655 CTR9Q6PD62 1173 aa22.39■■□□□ 1.18
BRF1-215ENST00000549655 TMC4Q7Z404 712 aa22.39■■□□□ 1.18
BRF1-215ENST00000549655 MICU3Q86XE3 530 aa22.39■■□□□ 1.18
BRF1-215ENST00000549655 TBC1D16Q8TBP0 767 aa22.39■■□□□ 1.18
BRF1-215ENST00000549655 CYP2D7A0A087X1C5 515 aa22.39■■□□□ 1.17
BRF1-215ENST00000549655 PPEF1O14829 653 aaPredicted RBP22.39■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms