RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 BTDP43251 543 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 CXCL9Q07325 125 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 DIXDC1Q155Q3 683 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 IMMTQ16891 758 aaKnown RBP16.87■□□□□ 0.29
CACNB3-211ENST00000549226 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 CREB3L3Q68CJ9 461 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 OGFOD1Q8N543 542 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 ZDHHC15Q96MV8 337 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 GMLQ99445 158 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 NAPBQ9H115 298 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 KCNQ5Q9NR82 932 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 AATFQ9NY61 560 aaKnown RBP eCLIP16.87■□□□□ 0.29
CACNB3-211ENST00000549226 DAGLAQ9Y4D2 1042 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 COL4A5P29400 1685 aa16.87■□□□□ 0.29
CACNB3-211ENST00000549226 CCDC88AQ3V6T2 1871 aa16.86■□□□□ 0.29
CACNB3-211ENST00000549226 SLC27A2O14975 620 aa16.86■□□□□ 0.29
CACNB3-211ENST00000549226 PSMA5P28066 241 aa16.86■□□□□ 0.29
CACNB3-211ENST00000549226 CRKP46108 304 aa16.86■□□□□ 0.29
CACNB3-211ENST00000549226 NT5C2P49902 561 aa16.86■□□□□ 0.29
CACNB3-211ENST00000549226 KIAA0825Q8IV33 1275 aa16.86■□□□□ 0.29
CACNB3-211ENST00000549226 TM6SF1Q9BZW5 370 aa16.86■□□□□ 0.29
CACNB3-211ENST00000549226 ZC3H4Q9UPT8 1303 aaKnown RBP16.86■□□□□ 0.29
CACNB3-211ENST00000549226 PSME4Q14997 1843 aa16.85■□□□□ 0.29
CACNB3-211ENST00000549226 GSG1L2A8MUP6 293 aa16.85■□□□□ 0.29
CACNB3-211ENST00000549226 FOXP2O15409 715 aa16.85■□□□□ 0.29
CACNB3-211ENST00000549226 FGAP02671 866 aa16.85■□□□□ 0.29
CACNB3-211ENST00000549226 YBX3P16989 372 aaKnown RBP eCLIP16.85■□□□□ 0.29
CACNB3-211ENST00000549226 TDO2P48775 406 aa16.85■□□□□ 0.29
CACNB3-211ENST00000549226 IFNL3Q8IZI9 196 aa16.85■□□□□ 0.29
CACNB3-211ENST00000549226 DPF2Q92785 391 aa16.85■□□□□ 0.29
CACNB3-211ENST00000549226 CHD4Q14839 1912 aa16.85■□□□□ 0.29
CACNB3-211ENST00000549226 F8W031 263 aaPredicted RBP16.84■□□□□ 0.29
CACNB3-211ENST00000549226 ZNF213O14771 459 aa16.84■□□□□ 0.29
CACNB3-211ENST00000549226 HMGB1P09429 215 aaKnown RBP16.84■□□□□ 0.29
CACNB3-211ENST00000549226 USP17L8P0C7I0 530 aa16.84■□□□□ 0.29
CACNB3-211ENST00000549226 PCP11498 1178 aaKnown RBP16.84■□□□□ 0.29
CACNB3-211ENST00000549226 DYNLL1P63167 89 aaKnown RBP16.84■□□□□ 0.29
CACNB3-211ENST00000549226 GPR162Q16538 588 aa16.84■□□□□ 0.29
CACNB3-211ENST00000549226 AMOTL1Q8IY63 956 aa16.84■□□□□ 0.29
CACNB3-211ENST00000549226 MTMR14Q8NCE2 650 aa16.84■□□□□ 0.29
CACNB3-211ENST00000549226 MXD3Q9BW11 206 aa16.84■□□□□ 0.29
CACNB3-211ENST00000549226 ARPP21Q9UBL0 812 aaPredicted RBP16.84■□□□□ 0.29
CACNB3-211ENST00000549226 SNX14Q9Y5W7 946 aa16.84■□□□□ 0.29
CACNB3-211ENST00000549226 SCN9AQ15858 1988 aa16.84■□□□□ 0.29
CACNB3-211ENST00000549226 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
CACNB3-211ENST00000549226 CYP21A2P08686 494 aa16.83■□□□□ 0.28
CACNB3-211ENST00000549226 TEX11Q8IYF3 940 aa16.83■□□□□ 0.28
CACNB3-211ENST00000549226 EPB41L4AQ9HCS5 686 aaPredicted RBP16.83■□□□□ 0.28
CACNB3-211ENST00000549226 TAOK2Q9UL54 1235 aa16.83■□□□□ 0.28
CACNB3-211ENST00000549226 MYO5AQ9Y4I1 1855 aaKnown RBP16.82■□□□□ 0.28
CACNB3-211ENST00000549226 ST18O60284 1047 aa16.82■□□□□ 0.28
CACNB3-211ENST00000549226 USP5P45974 858 aa16.82■□□□□ 0.28
CACNB3-211ENST00000549226 SCNN1DP51172 638 aa16.82■□□□□ 0.28
CACNB3-211ENST00000549226 PRELPP51888 382 aa16.82■□□□□ 0.28
CACNB3-211ENST00000549226 RHBDL3P58872 404 aa16.82■□□□□ 0.28
CACNB3-211ENST00000549226 SBK1Q52WX2 424 aa16.82■□□□□ 0.28
CACNB3-211ENST00000549226 APOBEC3HQ6NTF7 200 aaKnown RBP16.82■□□□□ 0.28
CACNB3-211ENST00000549226 GPC2Q8N158 579 aa16.82■□□□□ 0.28
CACNB3-211ENST00000549226 KIF2CQ99661 725 aa16.82■□□□□ 0.28
CACNB3-211ENST00000549226 RNF41Q9H4P4 317 aaPredicted RBP16.82■□□□□ 0.28
CACNB3-211ENST00000549226 DCP1AQ9NPI6 582 aaPredicted RBP16.82■□□□□ 0.28
CACNB3-211ENST00000549226 ANAPC4Q9UJX5 808 aa16.82■□□□□ 0.28
CACNB3-211ENST00000549226 PALD1Q9ULE6 856 aa16.82■□□□□ 0.28
CACNB3-211ENST00000549226 PRKAB2O43741 272 aa16.81■□□□□ 0.28
CACNB3-211ENST00000549226 SLC3A2P08195 630 aaKnown RBP16.81■□□□□ 0.28
CACNB3-211ENST00000549226 ZNF280AP59817 542 aaPredicted RBP16.81■□□□□ 0.28
CACNB3-211ENST00000549226 CFAP100Q494V2 611 aa16.81■□□□□ 0.28
CACNB3-211ENST00000549226 SH3RF3Q8TEJ3 882 aaPredicted RBP16.81■□□□□ 0.28
CACNB3-211ENST00000549226 SDR42E1Q8WUS8 393 aa16.81■□□□□ 0.28
CACNB3-211ENST00000549226 RNF181Q9P0P0 153 aa16.81■□□□□ 0.28
CACNB3-211ENST00000549226 ZNF646O15015 1829 aaPredicted RBP16.81■□□□□ 0.28
CACNB3-211ENST00000549226 MCM2P49736 904 aa16.8■□□□□ 0.28
CACNB3-211ENST00000549226 RBM5P52756 815 aaKnown RBP eCLIP16.8■□□□□ 0.28
CACNB3-211ENST00000549226 TRDNQ13061 729 aa16.8■□□□□ 0.28
CACNB3-211ENST00000549226 BECN1Q14457 450 aa16.8■□□□□ 0.28
CACNB3-211ENST00000549226 DLGAP5Q15398 846 aa16.8■□□□□ 0.28
CACNB3-211ENST00000549226 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
CACNB3-211ENST00000549226 CNNM2Q9H8M5 875 aa16.8■□□□□ 0.28
CACNB3-211ENST00000549226 USP40Q9NVE5 1235 aa16.8■□□□□ 0.28
CACNB3-211ENST00000549226 TMOD2Q9NZR1 351 aa16.8■□□□□ 0.28
CACNB3-211ENST00000549226 MKRN1Q9UHC7 482 aaKnown RBP16.8■□□□□ 0.28
CACNB3-211ENST00000549226 SPDYE2BA6NHP3 402 aa16.79■□□□□ 0.28
CACNB3-211ENST00000549226 MYO1BO43795 1136 aa16.79■□□□□ 0.28
CACNB3-211ENST00000549226 SPDYE6P0CI01 402 aa16.79■□□□□ 0.28
CACNB3-211ENST00000549226 FKBP1CQ5VVH2 108 aa16.79■□□□□ 0.28
CACNB3-211ENST00000549226 C9orf131Q5VYM1 1079 aa16.79■□□□□ 0.28
CACNB3-211ENST00000549226 CDC42EP5Q6NZY7 148 aa16.79■□□□□ 0.28
CACNB3-211ENST00000549226 SNX21Q969T3 373 aa16.79■□□□□ 0.28
CACNB3-211ENST00000549226 JAKMIP1Q96N16 626 aaKnown RBP16.79■□□□□ 0.28
CACNB3-211ENST00000549226 IDI2Q9BXS1 227 aa16.79■□□□□ 0.28
CACNB3-211ENST00000549226 ZSWIM6Q9HCJ5 1215 aa16.79■□□□□ 0.28
CACNB3-211ENST00000549226 ZBTB12Q9Y330 459 aaPredicted RBP16.79■□□□□ 0.28
CACNB3-211ENST00000549226 CYP46A1Q9Y6A2 500 aa16.79■□□□□ 0.28
CACNB3-211ENST00000549226 MYH2Q9UKX2 1941 aa16.78■□□□□ 0.28
CACNB3-211ENST00000549226 FLT1P17948 1338 aa16.78■□□□□ 0.28
CACNB3-211ENST00000549226 ZNF541Q9H0D2 1346 aa16.78■□□□□ 0.28
CACNB3-211ENST00000549226 PPARAQ07869 468 aa16.78■□□□□ 0.28
CACNB3-211ENST00000549226 BLOC1S2Q6QNY1 142 aa16.78■□□□□ 0.28
CACNB3-211ENST00000549226 TGFBRAP1Q8WUH2 860 aa16.78■□□□□ 0.28
CACNB3-211ENST00000549226 STAG1Q8WVM7 1258 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms