RNA–Protein interactions for RNA: ENST00000549034.1

RAB5B-205, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 558 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-205ENST00000549034 APOBEC3HQ6NTF7 200 aaKnown RBP11.67□□□□□ -0.54
RAB5B-205ENST00000549034 EDC3Q96F86 508 aaKnown RBP11.67□□□□□ -0.54
RAB5B-205ENST00000549034 FAM163AQ96GL9 167 aaPredicted RBP11.67□□□□□ -0.54
RAB5B-205ENST00000549034 HAUS7Q99871 368 aa11.67□□□□□ -0.54
RAB5B-205ENST00000549034 PAG1Q9NWQ8 432 aa11.67□□□□□ -0.54
RAB5B-205ENST00000549034 SSUH2Q9Y2M2 353 aa11.67□□□□□ -0.54
RAB5B-205ENST00000549034 DAGLAQ9Y4D2 1042 aa11.67□□□□□ -0.54
RAB5B-205ENST00000549034 AOX1Q06278 1338 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 TTC41PQ6P2S7 1318 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 PITPNM2Q9BZ72 1349 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 MX1P20591 662 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 CYP7A1P22680 504 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 APLP1P51693 650 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 CACNB3P54284 484 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 CDC42EP5Q6NZY7 148 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 APOBEC3FQ8IUX4 373 aaKnown RBP11.66□□□□□ -0.54
RAB5B-205ENST00000549034 MAGEB6Q8N7X4 407 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 NOL10Q9BSC4 688 aaKnown RBP11.66□□□□□ -0.54
RAB5B-205ENST00000549034 TMOD2Q9NZR1 351 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 ADAMTSL1Q8N6G6 1762 aa11.66□□□□□ -0.54
RAB5B-205ENST00000549034 PASKQ96RG2 1323 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 AK9Q5TCS8 1911 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 GPR75-ASB3A0A0A6YYF3 556 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 IGSF3O75054 1194 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 GLRX3O76003 335 aaKnown RBP11.65□□□□□ -0.54
RAB5B-205ENST00000549034 CELF2O95319 508 aaKnown RBP11.65□□□□□ -0.54
RAB5B-205ENST00000549034 HSPA6P17066 643 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 BTDP43251 543 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 TNNI2P48788 182 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 SLC9C2Q5TAH2 1124 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 ZNF384Q8TF68 577 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 CCDC136Q96JN2 1154 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 DEFB129Q9H1M3 183 aa11.65□□□□□ -0.54
RAB5B-205ENST00000549034 MROH7-TTC4A0A0A0MT08 1334 aa11.64□□□□□ -0.55
RAB5B-205ENST00000549034 TMEM88BA6NKF7 163 aa11.64□□□□□ -0.55
RAB5B-205ENST00000549034 BAG3O95817 575 aa11.64□□□□□ -0.55
RAB5B-205ENST00000549034 PDE1AP54750 535 aa11.64□□□□□ -0.55
RAB5B-205ENST00000549034 RASA3Q14644 834 aa11.64□□□□□ -0.55
RAB5B-205ENST00000549034 CST9Q5W186 159 aa11.64□□□□□ -0.55
RAB5B-205ENST00000549034 PLEKHM2Q8IWE5 1019 aa11.64□□□□□ -0.55
RAB5B-205ENST00000549034 CDCA5Q96FF9 252 aa11.64□□□□□ -0.55
RAB5B-205ENST00000549034 AATFQ9NY61 560 aaKnown RBP eCLIP11.64□□□□□ -0.55
RAB5B-205ENST00000549034 STAP2Q9UGK3 403 aa11.64□□□□□ -0.55
RAB5B-205ENST00000549034 GAKO14976 1311 aa11.63□□□□□ -0.55
RAB5B-205ENST00000549034 ECM29Q5VYK3 1845 aa11.63□□□□□ -0.55
RAB5B-205ENST00000549034 HTRA3P83110 453 aa11.63□□□□□ -0.55
RAB5B-205ENST00000549034 TCP10Q12799 353 aa11.63□□□□□ -0.55
RAB5B-205ENST00000549034 TNFAIP1Q13829 316 aa11.63□□□□□ -0.55
RAB5B-205ENST00000549034 PI4K2BQ8TCG2 481 aa11.63□□□□□ -0.55
RAB5B-205ENST00000549034 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.63□□□□□ -0.55
RAB5B-205ENST00000549034 TRPM7Q96QT4 1865 aa11.63□□□□□ -0.55
RAB5B-205ENST00000549034 SALL3Q9BXA9 1300 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 ZNF532Q9HCE3 1301 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 PDE6AP16499 860 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 NF2P35240 595 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 PPP4CP60510 307 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 DYNLL1P63167 89 aaKnown RBP11.62□□□□□ -0.55
RAB5B-205ENST00000549034 PICALMQ13492 652 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 PRKG1Q13976 671 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 TTLL12Q14166 644 aaPredicted RBP11.62□□□□□ -0.55
RAB5B-205ENST00000549034 SUPT20HL1Q3ZLR7 823 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 NBPF12Q5TAG4 269 aaPredicted RBP11.62□□□□□ -0.55
RAB5B-205ENST00000549034 ZSCAN25Q6NSZ9 544 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 CENPQQ7L2Z9 268 aaPredicted RBP11.62□□□□□ -0.55
RAB5B-205ENST00000549034 ADGRA1Q86SQ6 560 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 C2orf69Q8N8R5 385 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 MIGA1Q8NAN2 632 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 SH3RF3Q8TEJ3 882 aaPredicted RBP11.62□□□□□ -0.55
RAB5B-205ENST00000549034 ABT1Q9ULW3 272 aaKnown RBP11.62□□□□□ -0.55
RAB5B-205ENST00000549034 PPP2R3BQ9Y5P8 575 aa11.62□□□□□ -0.55
RAB5B-205ENST00000549034 MAGEB6P1A0A0J9YX57 407 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 TRIM6-TRIM34B2RNG4 842 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 PDE4AP27815 886 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 ADD2P35612 726 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 RHBDL3P58872 404 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 NFIAQ12857 509 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 SLFNL1Q499Z3 407 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 FKBP1CQ5VVH2 108 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 ERICH6BQ5W0A0 696 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 TMED8Q6PL24 325 aaPredicted RBP11.61□□□□□ -0.55
RAB5B-205ENST00000549034 FAM83AQ86UY5 434 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 TEX11Q8IYF3 940 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 KBTBD3Q8NAB2 608 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 FAM151AQ8WW52 585 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 RILPL2Q969X0 211 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 IDI2Q9BXS1 227 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 TMEM39BQ9GZU3 492 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 GBA2Q9HCG7 927 aaPredicted RBP11.61□□□□□ -0.55
RAB5B-205ENST00000549034 CREBZFQ9NS37 354 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 PPP4R2Q9NY27 417 aa11.61□□□□□ -0.55
RAB5B-205ENST00000549034 RNF113AO15541 343 aaKnown RBP11.6□□□□□ -0.55
RAB5B-205ENST00000549034 PLCG2P16885 1265 aa11.6□□□□□ -0.55
RAB5B-205ENST00000549034 RGS3P49796 1198 aa11.6□□□□□ -0.55
RAB5B-205ENST00000549034 DEFB115Q30KQ5 88 aa11.6□□□□□ -0.55
RAB5B-205ENST00000549034 LRRFIP1Q32MZ4 808 aaKnown RBP11.6□□□□□ -0.55
RAB5B-205ENST00000549034 ZSCAN29Q8IWY8 852 aaPredicted RBP11.6□□□□□ -0.55
RAB5B-205ENST00000549034 ZFPM1Q8IX07 1006 aa11.6□□□□□ -0.55
RAB5B-205ENST00000549034 TGFBRAP1Q8WUH2 860 aa11.6□□□□□ -0.55
RAB5B-205ENST00000549034 EVI5LQ96CN4 794 aa11.6□□□□□ -0.55
RAB5B-205ENST00000549034 FSD1Q9BTV5 496 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms