RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 WDR18Q9BV38 432 aa8.1□□□□□ -1.11
CNOT2-216ENST00000548939 DAGLAQ9Y4D2 1042 aa8.1□□□□□ -1.11
CNOT2-216ENST00000548939 TMEM238LA0A1B0GVL6 79 aa8.09□□□□□ -1.11
CNOT2-216ENST00000548939 RPS26P11Q5JNZ5 115 aaPredicted RBP8.09□□□□□ -1.11
CNOT2-216ENST00000548939 NFXL1Q6ZNB6 911 aa8.09□□□□□ -1.11
CNOT2-216ENST00000548939 LGR6Q9HBX8 967 aa8.09□□□□□ -1.11
CNOT2-216ENST00000548939 TRAK1Q9UPV9 953 aa8.09□□□□□ -1.11
CNOT2-216ENST00000548939 SYNGAP1Q96PV0 1343 aa8.08□□□□□ -1.12
CNOT2-216ENST00000548939 BTBD11A6QL63 1104 aa8.08□□□□□ -1.12
CNOT2-216ENST00000548939 IGHA2P01877 340 aa8.08□□□□□ -1.12
CNOT2-216ENST00000548939 ZNF157P51786 506 aaPredicted RBP8.08□□□□□ -1.12
CNOT2-216ENST00000548939 SEZ6L2Q6UXD5 910 aa8.08□□□□□ -1.12
CNOT2-216ENST00000548939 FLCNQ8NFG4 579 aa8.08□□□□□ -1.12
CNOT2-216ENST00000548939 C1GALT1Q9NS00 363 aa8.08□□□□□ -1.12
CNOT2-216ENST00000548939 ZC3H7BQ9UGR2 993 aaKnown RBP8.08□□□□□ -1.12
CNOT2-216ENST00000548939 PPP1R9AQ9ULJ8 1098 aa8.08□□□□□ -1.12
CNOT2-216ENST00000548939 DYNC1LI2O43237 492 aaPredicted RBP8.07□□□□□ -1.12
CNOT2-216ENST00000548939 YBX3P16989 372 aaKnown RBP eCLIP8.07□□□□□ -1.12
CNOT2-216ENST00000548939 LIG1P18858 919 aa8.07□□□□□ -1.12
CNOT2-216ENST00000548939 GRM2Q14416 872 aa8.07□□□□□ -1.12
CNOT2-216ENST00000548939 CSRNP1Q96S65 589 aa8.07□□□□□ -1.12
CNOT2-216ENST00000548939 CCDC86Q9H6F5 360 aaKnown RBP8.07□□□□□ -1.12
CNOT2-216ENST00000548939 FAAP100Q0VG06 881 aa8.06□□□□□ -1.12
CNOT2-216ENST00000548939 OGFOD3Q6PK18 319 aa8.06□□□□□ -1.12
CNOT2-216ENST00000548939 AGBL5Q8NDL9 886 aa8.06□□□□□ -1.12
CNOT2-216ENST00000548939 GLIS3Q8NEA6 775 aa8.06□□□□□ -1.12
CNOT2-216ENST00000548939 CCER1Q8TC90 406 aaPredicted RBP8.06□□□□□ -1.12
CNOT2-216ENST00000548939 DMRTB1Q96MA1 342 aa8.06□□□□□ -1.12
CNOT2-216ENST00000548939 ARID3AQ99856 593 aa8.06□□□□□ -1.12
CNOT2-216ENST00000548939 ZC3H12CQ9C0D7 883 aaKnown RBP8.06□□□□□ -1.12
CNOT2-216ENST00000548939 TMPRSS2O15393 492 aa8.05□□□□□ -1.12
CNOT2-216ENST00000548939 SLFN14P0C7P3 912 aa8.05□□□□□ -1.12
CNOT2-216ENST00000548939 DTHD1Q6ZMT9 781 aa8.05□□□□□ -1.12
CNOT2-216ENST00000548939 CBLL1Q75N03 491 aa8.05□□□□□ -1.12
CNOT2-216ENST00000548939 EPS8L3Q8TE67 593 aaKnown RBP8.05□□□□□ -1.12
CNOT2-216ENST00000548939 WDR89Q96FK6 387 aaPredicted RBP8.05□□□□□ -1.12
CNOT2-216ENST00000548939 RBCK1Q9BYM8 510 aa8.05□□□□□ -1.12
CNOT2-216ENST00000548939 PIDD1Q9HB75 910 aa8.05□□□□□ -1.12
CNOT2-216ENST00000548939 CRIM1Q9NZV1 1036 aa8.05□□□□□ -1.12
CNOT2-216ENST00000548939 HNRNPUQ00839 825 aaKnown RBP eCLIP8.04□□□□□ -1.12
CNOT2-216ENST00000548939 ID3Q02535 119 aa8.04□□□□□ -1.12
CNOT2-216ENST00000548939 PDE4CQ08493 712 aa8.04□□□□□ -1.12
CNOT2-216ENST00000548939 CYP27C1Q4G0S4 372 aa8.04□□□□□ -1.12
CNOT2-216ENST00000548939 RETREG2Q8NC44 543 aa8.04□□□□□ -1.12
CNOT2-216ENST00000548939 ALKBH8Q96BT7 664 aaKnown RBP8.04□□□□□ -1.12
CNOT2-216ENST00000548939 ATXN3LQ9H3M9 355 aa8.04□□□□□ -1.12
CNOT2-216ENST00000548939 PAK6Q9NQU5 681 aaPredicted RBP8.04□□□□□ -1.12
CNOT2-216ENST00000548939 GSTP1P09211 210 aaKnown RBP8.03□□□□□ -1.12
CNOT2-216ENST00000548939 COL19A1Q14993 1142 aa8.03□□□□□ -1.12
CNOT2-216ENST00000548939 FANCD2OSQ96PS1 177 aa8.03□□□□□ -1.12
CNOT2-216ENST00000548939 KRTAP9-9Q9BYP9 154 aa8.03□□□□□ -1.12
CNOT2-216ENST00000548939 KRTAP9-4Q9BYQ2 154 aa8.03□□□□□ -1.12
CNOT2-216ENST00000548939 NLRP2Q9NX02 1062 aa8.03□□□□□ -1.12
CNOT2-216ENST00000548939 PPP4R2Q9NY27 417 aa8.03□□□□□ -1.12
CNOT2-216ENST00000548939 GPN3Q9UHW5 284 aaPredicted RBP8.03□□□□□ -1.12
CNOT2-216ENST00000548939 ZNF862O60290 1169 aa8.02□□□□□ -1.13
CNOT2-216ENST00000548939 FCGRTP55899 365 aa8.02□□□□□ -1.13
CNOT2-216ENST00000548939 PPP2R3AQ06190 1150 aa8.02□□□□□ -1.13
CNOT2-216ENST00000548939 KRT82Q9NSB4 513 aa8.02□□□□□ -1.13
CNOT2-216ENST00000548939 TMEM39AQ9NV64 488 aa8.02□□□□□ -1.13
CNOT2-216ENST00000548939 SLC5A6Q9Y289 635 aa8.02□□□□□ -1.13
CNOT2-216ENST00000548939 FAM87AP0C7U9 286 aa8.01□□□□□ -1.13
CNOT2-216ENST00000548939 CDK5R2Q13319 367 aa8.01□□□□□ -1.13
CNOT2-216ENST00000548939 KIF4BQ2VIQ3 1234 aa8.01□□□□□ -1.13
CNOT2-216ENST00000548939 SMYD4Q8IYR2 804 aaPredicted RBP8.01□□□□□ -1.13
CNOT2-216ENST00000548939 BCL7CQ8WUZ0 217 aaPredicted RBP8.01□□□□□ -1.13
CNOT2-216ENST00000548939 ASIC4Q96FT7 647 aa8.01□□□□□ -1.13
CNOT2-216ENST00000548939 RNGTTO60942 597 aaKnown RBP8□□□□□ -1.13
CNOT2-216ENST00000548939 PI16Q6UXB8 463 aa8□□□□□ -1.13
CNOT2-216ENST00000548939 STK11IPQ8N1F8 1099 aa8□□□□□ -1.13
CNOT2-216ENST00000548939 KCNB2Q92953 911 aa8□□□□□ -1.13
CNOT2-216ENST00000548939 DISC1Q9NRI5 854 aa8□□□□□ -1.13
CNOT2-216ENST00000548939 PCDHGC5Q9Y5F6 944 aa8□□□□□ -1.13
CNOT2-216ENST00000548939 SOWAHDA6NJG2 315 aa7.99□□□□□ -1.13
CNOT2-216ENST00000548939 XRCC5P13010 732 aaKnown RBP7.99□□□□□ -1.13
CNOT2-216ENST00000548939 JUNBP17275 347 aaPredicted RBP7.99□□□□□ -1.13
CNOT2-216ENST00000548939 ITGB5P18084 799 aa7.99□□□□□ -1.13
CNOT2-216ENST00000548939 TTLL4Q14679 1199 aa7.99□□□□□ -1.13
CNOT2-216ENST00000548939 TMC7Q7Z402 723 aa7.99□□□□□ -1.13
CNOT2-216ENST00000548939 BCO2Q9BYV7 579 aa7.99□□□□□ -1.13
CNOT2-216ENST00000548939 BIN2Q9UBW5 565 aaPredicted RBP7.99□□□□□ -1.13
CNOT2-216ENST00000548939 HCLS1P14317 486 aaPredicted RBP7.98□□□□□ -1.13
CNOT2-216ENST00000548939 PLCL1Q15111 1095 aa7.98□□□□□ -1.13
CNOT2-216ENST00000548939 ZNF574Q6ZN55 896 aaPredicted RBP7.98□□□□□ -1.13
CNOT2-216ENST00000548939 PDZD3Q86UT5 571 aa7.98□□□□□ -1.13
CNOT2-216ENST00000548939 AKAP2Q9Y2D5 859 aa7.98□□□□□ -1.13
CNOT2-216ENST00000548939 SPRED2Q7Z698 418 aa7.97□□□□□ -1.13
CNOT2-216ENST00000548939 SULF2Q8IWU5 870 aa7.97□□□□□ -1.13
CNOT2-216ENST00000548939 FAM181AQ8N9Y4 354 aa7.97□□□□□ -1.13
CNOT2-216ENST00000548939 NETO1Q8TDF5 533 aa7.97□□□□□ -1.13
CNOT2-216ENST00000548939 MISP3Q96FF7 219 aa7.97□□□□□ -1.13
CNOT2-216ENST00000548939 DCTN4Q9UJW0 460 aa7.97□□□□□ -1.13
CNOT2-216ENST00000548939 PCOLCE2Q9UKZ9 415 aa7.97□□□□□ -1.13
CNOT2-216ENST00000548939 ARNTP27540 789 aa7.96□□□□□ -1.14
CNOT2-216ENST00000548939 BNIP3Q12983 259 aa7.96□□□□□ -1.14
CNOT2-216ENST00000548939 OGFOD2Q6N063 350 aa7.96□□□□□ -1.14
CNOT2-216ENST00000548939 PLD6Q8N2A8 252 aaKnown RBP7.96□□□□□ -1.14
CNOT2-216ENST00000548939 STK35Q8TDR2 534 aa7.96□□□□□ -1.14
CNOT2-216ENST00000548939 ZNF792Q3KQV3 632 aa7.95□□□□□ -1.14
CNOT2-216ENST00000548939 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms