RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 ASTN2O75129 1339 aaPredicted RBP28.01■■■□□ 2.07
SMARCD1-203ENST00000547247 GSPT1P15170 499 aaKnown RBP28.01■■■□□ 2.07
SMARCD1-203ENST00000547247 BTDP43251 543 aa28.01■■■□□ 2.07
SMARCD1-203ENST00000547247 ADGRA1Q86SQ6 560 aa28.01■■■□□ 2.07
SMARCD1-203ENST00000547247 GGA3Q9NZ52 723 aa28.01■■■□□ 2.07
SMARCD1-203ENST00000547247 TCRBV5S4A2TA0A5A2 114 aa28■■■□□ 2.07
SMARCD1-203ENST00000547247 ZFYP08048 801 aaPredicted RBP28■■■□□ 2.07
SMARCD1-203ENST00000547247 UBE3CQ15386 1083 aa28■■■□□ 2.07
SMARCD1-203ENST00000547247 ANGEL2Q5VTE6 544 aaKnown RBP28■■■□□ 2.07
SMARCD1-203ENST00000547247 MYH7P12883 1935 aa27.99■■■□□ 2.07
SMARCD1-203ENST00000547247 BAG3O95817 575 aa27.99■■■□□ 2.07
SMARCD1-203ENST00000547247 DCPSQ96C86 337 aaKnown RBP27.99■■■□□ 2.07
SMARCD1-203ENST00000547247 CLRN2A0PK11 232 aa27.99■■■□□ 2.07
SMARCD1-203ENST00000547247 RNF113AO15541 343 aaKnown RBP27.99■■■□□ 2.07
SMARCD1-203ENST00000547247 FSTL1Q12841 308 aa27.99■■■□□ 2.07
SMARCD1-203ENST00000547247 SPDYE2Q495Y8 402 aa27.99■■■□□ 2.07
SMARCD1-203ENST00000547247 CDC42EP5Q6NZY7 148 aa27.99■■■□□ 2.07
SMARCD1-203ENST00000547247 TICAM2Q86XR7 235 aa27.99■■■□□ 2.07
SMARCD1-203ENST00000547247 ZNF70Q9UC06 446 aaPredicted RBP27.99■■■□□ 2.07
SMARCD1-203ENST00000547247 PITPNM2Q9BZ72 1349 aa27.98■■■□□ 2.07
SMARCD1-203ENST00000547247 PPP4CP60510 307 aa27.98■■■□□ 2.07
SMARCD1-203ENST00000547247 CHADLQ6NUI6 762 aa27.98■■■□□ 2.07
SMARCD1-203ENST00000547247 USP40Q9NVE5 1235 aa27.98■■■□□ 2.07
SMARCD1-203ENST00000547247 AATFQ9NY61 560 aaKnown RBP eCLIP27.98■■■□□ 2.07
SMARCD1-203ENST00000547247 TMOD2Q9NZR1 351 aa27.98■■■□□ 2.07
SMARCD1-203ENST00000547247 CHGBP05060 677 aa27.97■■■□□ 2.07
SMARCD1-203ENST00000547247 SDSP20132 328 aa27.97■■■□□ 2.07
SMARCD1-203ENST00000547247 SLFNL1Q499Z3 407 aa27.97■■■□□ 2.07
SMARCD1-203ENST00000547247 MIGA1Q8NAN2 632 aa27.97■■■□□ 2.07
SMARCD1-203ENST00000547247 ECM29Q5VYK3 1845 aa27.97■■■□□ 2.07
SMARCD1-203ENST00000547247 CERS3Q8IU89 383 aa27.96■■■□□ 2.07
SMARCD1-203ENST00000547247 VEZTQ9HBM0 779 aa27.96■■■□□ 2.07
SMARCD1-203ENST00000547247 RFX7Q2KHR2 1363 aa27.95■■■□□ 2.07
SMARCD1-203ENST00000547247 PLCG2P16885 1265 aa27.95■■■□□ 2.07
SMARCD1-203ENST00000547247 MAP1SQ66K74 1059 aaPredicted RBP27.95■■■□□ 2.07
SMARCD1-203ENST00000547247 APOBEC3FQ8IUX4 373 aaKnown RBP27.95■■■□□ 2.07
SMARCD1-203ENST00000547247 RHBDL3P58872 404 aa27.94■■■□□ 2.06
SMARCD1-203ENST00000547247 APPBP2Q92624 585 aa27.94■■■□□ 2.06
SMARCD1-203ENST00000547247 MAGEB6P1A0A0J9YX57 407 aa27.94■■■□□ 2.06
SMARCD1-203ENST00000547247 DYNLL1P63167 89 aaKnown RBP27.94■■■□□ 2.06
SMARCD1-203ENST00000547247 BMP2KLQ5H9B9 411 aa27.94■■■□□ 2.06
SMARCD1-203ENST00000547247 SULF1Q8IWU6 871 aa27.94■■■□□ 2.06
SMARCD1-203ENST00000547247 AK9Q5TCS8 1911 aa27.93■■■□□ 2.06
SMARCD1-203ENST00000547247 TNFAIP1Q13829 316 aa27.93■■■□□ 2.06
SMARCD1-203ENST00000547247 FKBP1CQ5VVH2 108 aa27.93■■■□□ 2.06
SMARCD1-203ENST00000547247 CDC37L1Q7L3B6 337 aa27.93■■■□□ 2.06
SMARCD1-203ENST00000547247 KRT26Q7Z3Y9 468 aa27.93■■■□□ 2.06
SMARCD1-203ENST00000547247 CACNB3P54284 484 aa27.92■■■□□ 2.06
SMARCD1-203ENST00000547247 SH3RF3Q8TEJ3 882 aaPredicted RBP27.92■■■□□ 2.06
SMARCD1-203ENST00000547247 RIOK1Q9BRS2 568 aaKnown RBP27.92■■■□□ 2.06
SMARCD1-203ENST00000547247 PUS7LQ9H0K6 701 aaKnown RBP27.92■■■□□ 2.06
SMARCD1-203ENST00000547247 POLR2AP24928 1970 aaKnown RBP27.92■■■□□ 2.06
SMARCD1-203ENST00000547247 TCP10L2B9ZVM9 353 aa27.91■■■□□ 2.06
SMARCD1-203ENST00000547247 ZMYM1Q5SVZ6 1142 aa27.91■■■□□ 2.06
SMARCD1-203ENST00000547247 TEX11Q8IYF3 940 aa27.91■■■□□ 2.06
SMARCD1-203ENST00000547247 OSBP2Q969R2 916 aa27.91■■■□□ 2.06
SMARCD1-203ENST00000547247 HIP1O00291 1037 aa27.9■■■□□ 2.06
SMARCD1-203ENST00000547247 TNNI2P48788 182 aa27.9■■■□□ 2.06
SMARCD1-203ENST00000547247 AIDAQ96BJ3 306 aa27.9■■■□□ 2.06
SMARCD1-203ENST00000547247 IDI2Q9BXS1 227 aa27.9■■■□□ 2.06
SMARCD1-203ENST00000547247 GLIS2Q9BZE0 524 aaPredicted RBP27.9■■■□□ 2.06
SMARCD1-203ENST00000547247 SCAF8Q9UPN6 1271 aaKnown RBP27.9■■■□□ 2.06
SMARCD1-203ENST00000547247 MBD4O95243 580 aa27.9■■■□□ 2.06
SMARCD1-203ENST00000547247 USP48Q86UV5 1035 aa27.9■■■□□ 2.06
SMARCD1-203ENST00000547247 WDHD1O75717 1129 aaPredicted RBP27.89■■■□□ 2.05
SMARCD1-203ENST00000547247 NFIAQ12857 509 aa27.89■■■□□ 2.05
SMARCD1-203ENST00000547247 DEFB129Q9H1M3 183 aa27.89■■■□□ 2.05
SMARCD1-203ENST00000547247 ARMT1Q9H993 441 aa27.89■■■□□ 2.05
SMARCD1-203ENST00000547247 ADM5C9JUS6 153 aa27.88■■■□□ 2.05
SMARCD1-203ENST00000547247 RASA3Q14644 834 aa27.88■■■□□ 2.05
SMARCD1-203ENST00000547247 FAM83AQ86UY5 434 aa27.88■■■□□ 2.05
SMARCD1-203ENST00000547247 LCORLQ8N3X6 602 aa27.88■■■□□ 2.05
SMARCD1-203ENST00000547247 DIAPH3Q9NSV4 1193 aa27.88■■■□□ 2.05
SMARCD1-203ENST00000547247 SEC62Q99442 399 aaKnown RBP27.87■■■□□ 2.05
SMARCD1-203ENST00000547247 CRNKL1Q9BZJ0 848 aaKnown RBP27.87■■■□□ 2.05
SMARCD1-203ENST00000547247 HELLSQ9NRZ9 838 aa27.87■■■□□ 2.05
SMARCD1-203ENST00000547247 FAM198AQ9UFP1 575 aa27.87■■■□□ 2.05
SMARCD1-203ENST00000547247 PPP2R3BQ9Y5P8 575 aa27.87■■■□□ 2.05
SMARCD1-203ENST00000547247 HSPA6P17066 643 aa27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 NMIQ13287 307 aaPredicted RBP27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 TGFBRAP1Q8WUH2 860 aa27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 FAM227BQ96M60 508 aa27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 CNTNAP1P78357 1384 aa27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 M0R2C6 588 aa27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 ENTPD3O75355 529 aa27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 NPM3O75607 178 aaKnown RBP27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 ITGBL1O95965 494 aaPredicted RBP27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 TCP10Q12799 353 aa27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 PICALMQ13492 652 aa27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 FAM151AQ8WW52 585 aa27.86■■■□□ 2.05
SMARCD1-203ENST00000547247 A0A0D9SFI3 127 aa27.85■■■□□ 2.05
SMARCD1-203ENST00000547247 GPAA1O43292 621 aa27.85■■■□□ 2.05
SMARCD1-203ENST00000547247 STRBPQ96SI9 672 aaKnown RBP27.85■■■□□ 2.05
SMARCD1-203ENST00000547247 DDX4Q9NQI0 724 aaKnown RBP27.85■■■□□ 2.05
SMARCD1-203ENST00000547247 USP5P45974 858 aa27.84■■■□□ 2.05
SMARCD1-203ENST00000547247 MCMDC2Q4G0Z9 681 aa27.84■■■□□ 2.05
SMARCD1-203ENST00000547247 CWC27Q6UX04 472 aaKnown RBP27.84■■■□□ 2.05
SMARCD1-203ENST00000547247 TRAF5O00463 557 aa27.83■■■□□ 2.05
SMARCD1-203ENST00000547247 TMEM39BQ9GZU3 492 aa27.83■■■□□ 2.05
SMARCD1-203ENST00000547247 CHMLP26374 656 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms