RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 BTDP43251 543 aa18.94■□□□□ 0.62
TRAFD1-203ENST00000547063 SCNN1DP51172 638 aa18.94■□□□□ 0.62
TRAFD1-203ENST00000547063 DPY19L2Q6NUT2 758 aa18.94■□□□□ 0.62
TRAFD1-203ENST00000547063 MAP4K1Q92918 833 aa18.94■□□□□ 0.62
TRAFD1-203ENST00000547063 ARMT1Q9H993 441 aa18.94■□□□□ 0.62
TRAFD1-203ENST00000547063 CTNNA3Q9UI47 895 aa18.94■□□□□ 0.62
TRAFD1-203ENST00000547063 GJA3Q9Y6H8 435 aa18.94■□□□□ 0.62
TRAFD1-203ENST00000547063 PATL2C9JE40 543 aaKnown RBP18.93■□□□□ 0.62
TRAFD1-203ENST00000547063 APPP05067 770 aa18.93■□□□□ 0.62
TRAFD1-203ENST00000547063 RBM5P52756 815 aaKnown RBP eCLIP18.93■□□□□ 0.62
TRAFD1-203ENST00000547063 RNF20Q5VTR2 975 aa18.93■□□□□ 0.62
TRAFD1-203ENST00000547063 GIMAP6Q6P9H5 292 aa18.93■□□□□ 0.62
TRAFD1-203ENST00000547063 LCORLQ8N3X6 602 aa18.93■□□□□ 0.62
TRAFD1-203ENST00000547063 ZBTB12Q9Y330 459 aaPredicted RBP18.93■□□□□ 0.62
TRAFD1-203ENST00000547063 SLC4A4Q9Y6R1 1079 aa18.93■□□□□ 0.62
TRAFD1-203ENST00000547063 ZNF541Q9H0D2 1346 aa18.93■□□□□ 0.62
TRAFD1-203ENST00000547063 C22orf23Q9BZE7 217 aa18.92■□□□□ 0.62
TRAFD1-203ENST00000547063 ATP8A2Q9NTI2 1148 aa18.92■□□□□ 0.62
TRAFD1-203ENST00000547063 ZMYM6O95789 1325 aa18.92■□□□□ 0.62
TRAFD1-203ENST00000547063 GMPSP49915 693 aaPredicted RBP18.91■□□□□ 0.62
TRAFD1-203ENST00000547063 DYNLL1P63167 89 aaKnown RBP18.91■□□□□ 0.62
TRAFD1-203ENST00000547063 PTH1RQ03431 593 aa18.91■□□□□ 0.62
TRAFD1-203ENST00000547063 DLGAP5Q15398 846 aa18.91■□□□□ 0.62
TRAFD1-203ENST00000547063 ALX1Q15699 326 aa18.91■□□□□ 0.62
TRAFD1-203ENST00000547063 CFAP100Q494V2 611 aa18.91■□□□□ 0.62
TRAFD1-203ENST00000547063 MTMR14Q8NCE2 650 aa18.91■□□□□ 0.62
TRAFD1-203ENST00000547063 RBM25P49756 843 aaKnown RBP18.9■□□□□ 0.62
TRAFD1-203ENST00000547063 ZNF280AP59817 542 aaPredicted RBP18.9■□□□□ 0.62
TRAFD1-203ENST00000547063 TBC1D32Q96NH3 1257 aa18.9■□□□□ 0.62
TRAFD1-203ENST00000547063 RBM8AQ9Y5S9 174 aaKnown RBP18.9■□□□□ 0.62
TRAFD1-203ENST00000547063 GSG1L2A8MUP6 293 aa18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 H7C1D1 291 aa18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 MYO1BO43795 1136 aa18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 ZKSCAN1P17029 563 aaPredicted RBP18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 HSPA4P34932 840 aa18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 USP5P45974 858 aa18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 VPS53Q5VIR6 699 aa18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 APOBEC3HQ6NTF7 200 aaKnown RBP18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 TEX11Q8IYF3 940 aa18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 NAPBQ9H115 298 aa18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 TMOD2Q9NZR1 351 aa18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 CNOT7Q9UIV1 285 aaKnown RBP18.89■□□□□ 0.61
TRAFD1-203ENST00000547063 SPDYE2BA6NHP3 402 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 SPDYE6P0CI01 402 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 LMOD1P29536 600 aaPredicted RBP18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 TDO2P48775 406 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 RHBDL3P58872 404 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 ANAPC15P60006 121 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 NECTIN1Q15223 517 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 IMMTQ16891 758 aaKnown RBP18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 MICALL2Q8IY33 904 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 AMOTL1Q8IY63 956 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 IFNL3Q8IZI9 196 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 SH3RF3Q8TEJ3 882 aaPredicted RBP18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 MYOZ2Q9NPC6 264 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 USP40Q9NVE5 1235 aa18.88■□□□□ 0.61
TRAFD1-203ENST00000547063 FGAP02671 866 aa18.87■□□□□ 0.61
TRAFD1-203ENST00000547063 GPRC5DQ9NZD1 345 aa18.87■□□□□ 0.61
TRAFD1-203ENST00000547063 ECM29Q5VYK3 1845 aa18.86■□□□□ 0.61
TRAFD1-203ENST00000547063 FOXP2O15409 715 aa18.86■□□□□ 0.61
TRAFD1-203ENST00000547063 PRKAB2O43741 272 aa18.86■□□□□ 0.61
TRAFD1-203ENST00000547063 NPM3O75607 178 aaKnown RBP18.86■□□□□ 0.61
TRAFD1-203ENST00000547063 CDC42EP5Q6NZY7 148 aa18.86■□□□□ 0.61
TRAFD1-203ENST00000547063 IL27Q8NEV9 243 aa18.86■□□□□ 0.61
TRAFD1-203ENST00000547063 SDR42E1Q8WUS8 393 aa18.86■□□□□ 0.61
TRAFD1-203ENST00000547063 DCP1AQ9NPI6 582 aaPredicted RBP18.86■□□□□ 0.61
TRAFD1-203ENST00000547063 ARPP21Q9UBL0 812 aaPredicted RBP18.86■□□□□ 0.61
TRAFD1-203ENST00000547063 GLTPD2A6NH11 291 aa18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 ZNF213O14771 459 aa18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 DDNO94850 711 aaPredicted RBP18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 KRT32Q14532 448 aa18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 CREB3L3Q68CJ9 461 aa18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 TGFBRAP1Q8WUH2 860 aa18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 KCNB2Q92953 911 aa18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 L3MBTL3Q96JM7 780 aaPredicted RBP18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 IDI2Q9BXS1 227 aa18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 FOCADQ5VW36 1801 aa18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 ADAMTSL1Q8N6G6 1762 aa18.85■□□□□ 0.61
TRAFD1-203ENST00000547063 SLC27A2O14975 620 aa18.84■□□□□ 0.61
TRAFD1-203ENST00000547063 TSGA10IPQ3SY00 556 aa18.84■□□□□ 0.61
TRAFD1-203ENST00000547063 SBK1Q52WX2 424 aa18.84■□□□□ 0.61
TRAFD1-203ENST00000547063 FKBP1CQ5VVH2 108 aa18.84■□□□□ 0.61
TRAFD1-203ENST00000547063 ZBED3Q96IU2 234 aaPredicted RBP18.84■□□□□ 0.61
TRAFD1-203ENST00000547063 PRMT6Q96LA8 375 aaPredicted RBP18.84■□□□□ 0.61
TRAFD1-203ENST00000547063 EPB41L4AQ9HCS5 686 aaPredicted RBP18.84■□□□□ 0.61
TRAFD1-203ENST00000547063 CDK5RAP2Q96SN8 1893 aa18.84■□□□□ 0.61
TRAFD1-203ENST00000547063 FLT1P17948 1338 aa18.83■□□□□ 0.61
TRAFD1-203ENST00000547063 KIF4BQ2VIQ3 1234 aa18.83■□□□□ 0.6
TRAFD1-203ENST00000547063 IL17RAQ96F46 866 aa18.83■□□□□ 0.6
TRAFD1-203ENST00000547063 TDRD3Q9H7E2 651 aaKnown RBP18.83■□□□□ 0.6
TRAFD1-203ENST00000547063 MCM9Q9NXL9 1143 aa18.83■□□□□ 0.6
TRAFD1-203ENST00000547063 MKRN1Q9UHC7 482 aaKnown RBP18.83■□□□□ 0.6
TRAFD1-203ENST00000547063 NAV1Q8NEY1 1877 aa18.83■□□□□ 0.6
TRAFD1-203ENST00000547063 LAMA4Q16363 1823 aa18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 IQCA1LA6NCM1 817 aa18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 WNT10BO00744 389 aa18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 ENTPD3O75355 529 aa18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 WDHD1O75717 1129 aaPredicted RBP18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 SLC3A2P08195 630 aaKnown RBP18.82■□□□□ 0.6
TRAFD1-203ENST00000547063 CYP21A2P08686 494 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms