RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 DNAJC5GQ8N7S2 189 aa30.92■■■□□ 2.54
NKX2-1-205ENST00000546983 USP40Q9NVE5 1235 aa30.92■■■□□ 2.54
NKX2-1-205ENST00000546983 RPAP1Q9BWH6 1393 aaPredicted RBP30.92■■■□□ 2.54
NKX2-1-205ENST00000546983 SMARCA5O60264 1052 aaPredicted RBP30.91■■■□□ 2.54
NKX2-1-205ENST00000546983 NPM3O75607 178 aaKnown RBP30.91■■■□□ 2.54
NKX2-1-205ENST00000546983 IDH1O75874 414 aaKnown RBP30.91■■■□□ 2.54
NKX2-1-205ENST00000546983 FMR1Q06787 632 aaKnown RBP eCLIP30.91■■■□□ 2.54
NKX2-1-205ENST00000546983 ANKRD45Q5TZF3 282 aa30.91■■■□□ 2.54
NKX2-1-205ENST00000546983 CDC42EP5Q6NZY7 148 aa30.91■■■□□ 2.54
NKX2-1-205ENST00000546983 SMC5Q8IY18 1101 aa30.91■■■□□ 2.54
NKX2-1-205ENST00000546983 HAUS7Q99871 368 aa30.91■■■□□ 2.54
NKX2-1-205ENST00000546983 BCL11AQ9H165 835 aa30.91■■■□□ 2.54
NKX2-1-205ENST00000546983 TCP10L2B9ZVM9 353 aa30.9■■■□□ 2.54
NKX2-1-205ENST00000546983 BTDP43251 543 aa30.9■■■□□ 2.54
NKX2-1-205ENST00000546983 HUNKP57058 714 aa30.9■■■□□ 2.54
NKX2-1-205ENST00000546983 IDI2Q9BXS1 227 aa30.9■■■□□ 2.54
NKX2-1-205ENST00000546983 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.9■■■□□ 2.54
NKX2-1-205ENST00000546983 ENTPD3O75355 529 aa30.89■■■□□ 2.54
NKX2-1-205ENST00000546983 FAM151AQ8WW52 585 aa30.89■■■□□ 2.54
NKX2-1-205ENST00000546983 PAG1Q9NWQ8 432 aa30.89■■■□□ 2.54
NKX2-1-205ENST00000546983 POLR2AP24928 1970 aaKnown RBP30.88■■■□□ 2.53
NKX2-1-205ENST00000546983 TTLL12Q14166 644 aaPredicted RBP30.88■■■□□ 2.53
NKX2-1-205ENST00000546983 LRRFIP1Q32MZ4 808 aaKnown RBP30.88■■■□□ 2.53
NKX2-1-205ENST00000546983 ZSCAN25Q6NSZ9 544 aa30.88■■■□□ 2.53
NKX2-1-205ENST00000546983 CCDC102AQ96A19 550 aa30.88■■■□□ 2.53
NKX2-1-205ENST00000546983 DNAJC2Q99543 621 aaKnown RBP30.88■■■□□ 2.53
NKX2-1-205ENST00000546983 AKAP11Q9UKA4 1901 aa30.87■■■□□ 2.53
NKX2-1-205ENST00000546983 PPP4CP60510 307 aa30.87■■■□□ 2.53
NKX2-1-205ENST00000546983 HTRA3P83110 453 aa30.87■■■□□ 2.53
NKX2-1-205ENST00000546983 BOLA2Q9H3K6 86 aa30.87■■■□□ 2.53
NKX2-1-205ENST00000546983 PIH1D3Q9NQM4 214 aaKnown RBP30.87■■■□□ 2.53
NKX2-1-205ENST00000546983 PAPPA2Q9BXP8 1791 aa30.87■■■□□ 2.53
NKX2-1-205ENST00000546983 GLRX3O76003 335 aaKnown RBP30.86■■■□□ 2.53
NKX2-1-205ENST00000546983 GOLIM4O00461 696 aa30.85■■■□□ 2.53
NKX2-1-205ENST00000546983 IREB2P48200 963 aaKnown RBP30.85■■■□□ 2.53
NKX2-1-205ENST00000546983 MAP3K11Q16584 847 aa30.85■■■□□ 2.53
NKX2-1-205ENST00000546983 DCAF15Q66K64 600 aa30.85■■■□□ 2.53
NKX2-1-205ENST00000546983 MKRN1Q9UHC7 482 aaKnown RBP30.85■■■□□ 2.53
NKX2-1-205ENST00000546983 AOX1Q06278 1338 aa30.84■■■□□ 2.53
NKX2-1-205ENST00000546983 MX1P20591 662 aa30.84■■■□□ 2.53
NKX2-1-205ENST00000546983 CYP7A1P22680 504 aa30.84■■■□□ 2.53
NKX2-1-205ENST00000546983 RGMBQ6NW40 437 aa30.84■■■□□ 2.53
NKX2-1-205ENST00000546983 PAXIP1Q6ZW49 1069 aaPredicted RBP30.84■■■□□ 2.53
NKX2-1-205ENST00000546983 PRAMEF18Q5VWM3 479 aa30.83■■■□□ 2.53
NKX2-1-205ENST00000546983 JMYQ8N9B5 988 aa30.83■■■□□ 2.53
NKX2-1-205ENST00000546983 ZNF384Q8TF68 577 aa30.83■■■□□ 2.53
NKX2-1-205ENST00000546983 SCAF8Q9UPN6 1271 aaKnown RBP30.83■■■□□ 2.53
NKX2-1-205ENST00000546983 MAST2Q6P0Q8 1798 aa30.82■■■□□ 2.52
NKX2-1-205ENST00000546983 NBPF12Q5TAG4 269 aaPredicted RBP30.82■■■□□ 2.52
NKX2-1-205ENST00000546983 DLK2Q6UY11 383 aa30.82■■■□□ 2.52
NKX2-1-205ENST00000546983 MAGEB6Q8N7X4 407 aa30.82■■■□□ 2.52
NKX2-1-205ENST00000546983 CAPNS2Q96L46 248 aa30.82■■■□□ 2.52
NKX2-1-205ENST00000546983 TEPSINQ96N21 525 aa30.82■■■□□ 2.52
NKX2-1-205ENST00000546983 TMEM39BQ9GZU3 492 aa30.82■■■□□ 2.52
NKX2-1-205ENST00000546983 ANTXR1Q9H6X2 564 aa30.82■■■□□ 2.52
NKX2-1-205ENST00000546983 MYH2Q9UKX2 1941 aa30.82■■■□□ 2.52
NKX2-1-205ENST00000546983 MAP2K2P36507 400 aa30.81■■■□□ 2.52
NKX2-1-205ENST00000546983 CACNB3P54284 484 aa30.81■■■□□ 2.52
NKX2-1-205ENST00000546983 NOGQ13253 232 aa30.81■■■□□ 2.52
NKX2-1-205ENST00000546983 SLC9C2Q5TAH2 1124 aa30.81■■■□□ 2.52
NKX2-1-205ENST00000546983 REM2Q8IYK8 340 aaPredicted RBP30.81■■■□□ 2.52
NKX2-1-205ENST00000546983 WDR33Q9C0J8 1336 aaKnown RBP30.8■■■□□ 2.52
NKX2-1-205ENST00000546983 RHBDL3P58872 404 aa30.8■■■□□ 2.52
NKX2-1-205ENST00000546983 IRX6P78412 446 aaPredicted RBP30.8■■■□□ 2.52
NKX2-1-205ENST00000546983 ANGEL1Q9UNK9 670 aaKnown RBP30.8■■■□□ 2.52
NKX2-1-205ENST00000546983 NEFLP07196 543 aa30.79■■■□□ 2.52
NKX2-1-205ENST00000546983 VEGFBP49765 207 aa30.79■■■□□ 2.52
NKX2-1-205ENST00000546983 RGS3P49796 1198 aa30.79■■■□□ 2.52
NKX2-1-205ENST00000546983 ZNF157P51786 506 aaPredicted RBP30.79■■■□□ 2.52
NKX2-1-205ENST00000546983 CHD1LQ86WJ1 897 aa30.79■■■□□ 2.52
NKX2-1-205ENST00000546983 TICAM2Q86XR7 235 aa30.79■■■□□ 2.52
NKX2-1-205ENST00000546983 TEX11Q8IYF3 940 aa30.79■■■□□ 2.52
NKX2-1-205ENST00000546983 AATFQ9NY61 560 aaKnown RBP eCLIP30.79■■■□□ 2.52
NKX2-1-205ENST00000546983 STAP2Q9UGK3 403 aa30.79■■■□□ 2.52
NKX2-1-205ENST00000546983 WDHD1O75717 1129 aaPredicted RBP30.78■■■□□ 2.52
NKX2-1-205ENST00000546983 IGHDP01880 384 aa30.78■■■□□ 2.52
NKX2-1-205ENST00000546983 ZFYP08048 801 aaPredicted RBP30.78■■■□□ 2.52
NKX2-1-205ENST00000546983 NUCB1Q02818 461 aa30.78■■■□□ 2.52
NKX2-1-205ENST00000546983 LDLRAD1Q5T700 205 aa30.78■■■□□ 2.52
NKX2-1-205ENST00000546983 ANKRD13AQ8IZ07 590 aa30.78■■■□□ 2.52
NKX2-1-205ENST00000546983 DHX36Q9H2U1 1008 aaKnown RBP30.78■■■□□ 2.52
NKX2-1-205ENST00000546983 FAM198AQ9UFP1 575 aa30.78■■■□□ 2.52
NKX2-1-205ENST00000546983 NDUFB9Q9Y6M9 179 aa30.78■■■□□ 2.52
NKX2-1-205ENST00000546983 COL2A1P02458 1487 aaPredicted RBP30.77■■■□□ 2.52
NKX2-1-205ENST00000546983 PDE6AP16499 860 aa30.77■■■□□ 2.52
NKX2-1-205ENST00000546983 NFIAQ12857 509 aa30.77■■■□□ 2.52
NKX2-1-205ENST00000546983 UBE3CQ15386 1083 aa30.77■■■□□ 2.52
NKX2-1-205ENST00000546983 RFX7Q2KHR2 1363 aa30.77■■■□□ 2.52
NKX2-1-205ENST00000546983 MAP2K1Q02750 393 aaPredicted RBP30.76■■■□□ 2.51
NKX2-1-205ENST00000546983 TCP10Q12799 353 aa30.76■■■□□ 2.51
NKX2-1-205ENST00000546983 ZSCAN29Q8IWY8 852 aaPredicted RBP30.76■■■□□ 2.51
NKX2-1-205ENST00000546983 KBTBD3Q8NAB2 608 aa30.76■■■□□ 2.51
NKX2-1-205ENST00000546983 UBE2Q2LH0YL09 131 aa30.74■■■□□ 2.51
NKX2-1-205ENST00000546983 CYP4F22Q6NT55 531 aa30.74■■■□□ 2.51
NKX2-1-205ENST00000546983 CSRNP1Q96S65 589 aa30.74■■■□□ 2.51
NKX2-1-205ENST00000546983 ZNF341Q9BYN7 854 aa30.74■■■□□ 2.51
NKX2-1-205ENST00000546983 ATRNL1Q5VV63 1379 aa30.74■■■□□ 2.51
NKX2-1-205ENST00000546983 SALL3Q9BXA9 1300 aa30.73■■■□□ 2.51
NKX2-1-205ENST00000546983 MAGEB6P1A0A0J9YX57 407 aa30.73■■■□□ 2.51
NKX2-1-205ENST00000546983 USP2O75604 605 aaPredicted RBP30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms