RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 BPNT1O95861 308 aa9.68□□□□□ -0.86
NPAS3-204ENST00000546849 ELNP15502 786 aa9.68□□□□□ -0.86
NPAS3-204ENST00000546849 TFE3P19532 575 aaPredicted RBP9.68□□□□□ -0.86
NPAS3-204ENST00000546849 LMNB2Q03252 620 aa9.68□□□□□ -0.86
NPAS3-204ENST00000546849 RAD18Q9NS91 495 aa9.68□□□□□ -0.86
NPAS3-204ENST00000546849 DDX3YO15523 660 aaKnown RBP9.67□□□□□ -0.86
NPAS3-204ENST00000546849 BMP6P22004 513 aa9.67□□□□□ -0.86
NPAS3-204ENST00000546849 RACK1P63244 317 aaKnown RBP9.67□□□□□ -0.86
NPAS3-204ENST00000546849 NAALADL2Q58DX5 795 aa9.67□□□□□ -0.86
NPAS3-204ENST00000546849 ACAD11Q709F0 780 aa9.67□□□□□ -0.86
NPAS3-204ENST00000546849 VPS37DQ86XT2 251 aa9.67□□□□□ -0.86
NPAS3-204ENST00000546849 GOLM1Q8NBJ4 401 aa9.67□□□□□ -0.86
NPAS3-204ENST00000546849 JARID2Q92833 1246 aaPredicted RBP9.67□□□□□ -0.86
NPAS3-204ENST00000546849 C8orf37Q96NL8 207 aa9.67□□□□□ -0.86
NPAS3-204ENST00000546849 TRIM37O94972 964 aa9.66□□□□□ -0.86
NPAS3-204ENST00000546849 SEPT6Q14141 434 aa9.66□□□□□ -0.86
NPAS3-204ENST00000546849 FOXD4L6Q3SYB3 417 aaPredicted RBP9.66□□□□□ -0.86
NPAS3-204ENST00000546849 FOXD4L3Q6VB84 417 aaPredicted RBP9.66□□□□□ -0.86
NPAS3-204ENST00000546849 GRIN3AQ8TCU5 1115 aa9.66□□□□□ -0.86
NPAS3-204ENST00000546849 STK35Q8TDR2 534 aa9.66□□□□□ -0.86
NPAS3-204ENST00000546849 RHOVQ96L33 236 aa9.66□□□□□ -0.86
NPAS3-204ENST00000546849 APBA3O96018 575 aa9.65□□□□□ -0.86
NPAS3-204ENST00000546849 SCARA3Q6AZY7 606 aa9.65□□□□□ -0.86
NPAS3-204ENST00000546849 ALYREFQ86V81 257 aaKnown RBP9.65□□□□□ -0.86
NPAS3-204ENST00000546849 TRIM42Q8IWZ5 723 aa9.65□□□□□ -0.86
NPAS3-204ENST00000546849 UBASH3BQ8TF42 649 aa9.65□□□□□ -0.86
NPAS3-204ENST00000546849 ZNF296Q8WUU4 475 aaPredicted RBP9.65□□□□□ -0.86
NPAS3-204ENST00000546849 NACC1Q96RE7 527 aa9.65□□□□□ -0.86
NPAS3-204ENST00000546849 RUSC1Q9BVN2 902 aa9.65□□□□□ -0.86
NPAS3-204ENST00000546849 MRPL18Q9H0U6 180 aaKnown RBP9.65□□□□□ -0.86
NPAS3-204ENST00000546849 KRT82Q9NSB4 513 aa9.65□□□□□ -0.86
NPAS3-204ENST00000546849 USP21Q9UK80 565 aa9.65□□□□□ -0.86
NPAS3-204ENST00000546849 PCDHA4Q9UN74 947 aa9.65□□□□□ -0.86
NPAS3-204ENST00000546849 PCDHB5Q9Y5E4 795 aa9.65□□□□□ -0.86
NPAS3-204ENST00000546849 LOC100289279A0A1B0GTE1 492 aa9.64□□□□□ -0.87
NPAS3-204ENST00000546849 DLL1O00548 723 aa9.64□□□□□ -0.87
NPAS3-204ENST00000546849 SPATA31C1P0DKV0 1188 aa9.64□□□□□ -0.87
NPAS3-204ENST00000546849 APOBRQ0VD83 1088 aa9.64□□□□□ -0.87
NPAS3-204ENST00000546849 PAK2Q13177 524 aa9.64□□□□□ -0.87
NPAS3-204ENST00000546849 IGF2-ASQ6U949 168 aa9.64□□□□□ -0.87
NPAS3-204ENST00000546849 GPRASP2Q96D09 838 aa9.64□□□□□ -0.87
NPAS3-204ENST00000546849 PICK1Q9NRD5 415 aa9.64□□□□□ -0.87
NPAS3-204ENST00000546849 ADAMTS1Q9UHI8 967 aa9.64□□□□□ -0.87
NPAS3-204ENST00000546849 ADAM11O75078 769 aa9.63□□□□□ -0.87
NPAS3-204ENST00000546849 ECEL1O95672 775 aa9.63□□□□□ -0.87
NPAS3-204ENST00000546849 SLFN14P0C7P3 912 aa9.63□□□□□ -0.87
NPAS3-204ENST00000546849 TNNI2P48788 182 aa9.63□□□□□ -0.87
NPAS3-204ENST00000546849 ZNF252P-AS1Q0IIN9 211 aa9.63□□□□□ -0.87
NPAS3-204ENST00000546849 RASIP1Q5U651 963 aa9.63□□□□□ -0.87
NPAS3-204ENST00000546849 NUTM2GQ5VZR2 741 aa9.63□□□□□ -0.87
NPAS3-204ENST00000546849 PDZD3Q86UT5 571 aa9.63□□□□□ -0.87
NPAS3-204ENST00000546849 CCDC84Q86UT8 332 aaPredicted RBP9.63□□□□□ -0.87
NPAS3-204ENST00000546849 ELMO3Q96BJ8 720 aa9.63□□□□□ -0.87
NPAS3-204ENST00000546849 SPATA32Q96LK8 384 aa9.63□□□□□ -0.87
NPAS3-204ENST00000546849 CCDC86Q9H6F5 360 aaKnown RBP9.63□□□□□ -0.87
NPAS3-204ENST00000546849 GPBAR1Q8TDU6 330 aa9.62□□□□□ -0.87
NPAS3-204ENST00000546849 RNF208Q9H0X6 261 aa9.62□□□□□ -0.87
NPAS3-204ENST00000546849 KCNK4Q9NYG8 393 aa9.62□□□□□ -0.87
NPAS3-204ENST00000546849 TLR3O15455 904 aaKnown RBP9.61□□□□□ -0.87
NPAS3-204ENST00000546849 LIG1P18858 919 aa9.61□□□□□ -0.87
NPAS3-204ENST00000546849 SF3A1Q15459 793 aaKnown RBP9.61□□□□□ -0.87
NPAS3-204ENST00000546849 CWF19L2Q2TBE0 894 aaKnown RBP9.61□□□□□ -0.87
NPAS3-204ENST00000546849 FDX2Q6P4F2 183 aa9.61□□□□□ -0.87
NPAS3-204ENST00000546849 FBXL19Q6PCT2 694 aa9.61□□□□□ -0.87
NPAS3-204ENST00000546849 BNC2Q6ZN30 1099 aaPredicted RBP9.61□□□□□ -0.87
NPAS3-204ENST00000546849 NRSN2Q9GZP1 204 aa9.61□□□□□ -0.87
NPAS3-204ENST00000546849 CYP4F12Q9HCS2 524 aa9.61□□□□□ -0.87
NPAS3-204ENST00000546849 DNAJA1P31689 397 aaKnown RBP9.6□□□□□ -0.87
NPAS3-204ENST00000546849 GRIK4Q16099 956 aa9.6□□□□□ -0.87
NPAS3-204ENST00000546849 AKAP4Q5JQC9 854 aa9.6□□□□□ -0.87
NPAS3-204ENST00000546849 EXOSC6Q5RKV6 272 aaKnown RBP9.6□□□□□ -0.87
NPAS3-204ENST00000546849 FAM196AQ6ZSG2 479 aa9.6□□□□□ -0.87
NPAS3-204ENST00000546849 ILDR2Q71H61 639 aa9.6□□□□□ -0.87
NPAS3-204ENST00000546849 GATAD2BQ8WXI9 593 aa9.6□□□□□ -0.87
NPAS3-204ENST00000546849 NKD1Q969G9 470 aa9.6□□□□□ -0.87
NPAS3-204ENST00000546849 GAL3ST3Q96A11 431 aa9.6□□□□□ -0.87
NPAS3-204ENST00000546849 AP4E1Q9UPM8 1137 aa9.6□□□□□ -0.87
NPAS3-204ENST00000546849 WISP1O95388 367 aa9.59□□□□□ -0.87
NPAS3-204ENST00000546849 F13A1P00488 732 aa9.59□□□□□ -0.87
NPAS3-204ENST00000546849 MCM4P33991 863 aa9.59□□□□□ -0.87
NPAS3-204ENST00000546849 NRG1Q02297 640 aaPredicted RBP9.59□□□□□ -0.87
NPAS3-204ENST00000546849 ARID5AQ03989 594 aa9.59□□□□□ -0.87
NPAS3-204ENST00000546849 MPP2Q14168 576 aa9.59□□□□□ -0.87
NPAS3-204ENST00000546849 HDXQ7Z353 690 aa9.59□□□□□ -0.87
NPAS3-204ENST00000546849 TINF2Q9BSI4 451 aa9.59□□□□□ -0.87
NPAS3-204ENST00000546849 NT5C1AQ9BXI3 368 aa9.59□□□□□ -0.87
NPAS3-204ENST00000546849 UBP1Q9NZI7 540 aa9.59□□□□□ -0.87
NPAS3-204ENST00000546849 ROBO2Q9HCK4 1378 aa9.59□□□□□ -0.87
NPAS3-204ENST00000546849 C9orf172C9J069 976 aa9.58□□□□□ -0.88
NPAS3-204ENST00000546849 SART1O43290 800 aaKnown RBP9.58□□□□□ -0.88
NPAS3-204ENST00000546849 CTSBP07858 339 aa9.58□□□□□ -0.88
NPAS3-204ENST00000546849 RPL6Q02878 288 aaKnown RBP9.58□□□□□ -0.88
NPAS3-204ENST00000546849 KCNQ5Q9NR82 932 aa9.58□□□□□ -0.88
NPAS3-204ENST00000546849 USP35Q9P2H5 1018 aa9.58□□□□□ -0.88
NPAS3-204ENST00000546849 AOC2O75106 756 aa9.57□□□□□ -0.88
NPAS3-204ENST00000546849 SEZ6Q53EL9 994 aa9.57□□□□□ -0.88
NPAS3-204ENST00000546849 WIPI1Q5MNZ9 446 aaPredicted RBP9.57□□□□□ -0.88
NPAS3-204ENST00000546849 SHISA2Q6UWI4 295 aa9.57□□□□□ -0.88
NPAS3-204ENST00000546849 MPRIPQ6WCQ1 1025 aa9.57□□□□□ -0.88
NPAS3-204ENST00000546849 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms