RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 USP17L1Q7RTZ2 530 aa9.09□□□□□ -0.95
CCDC60-205ENST00000546345 CYP2U1Q7Z449 544 aa9.09□□□□□ -0.95
CCDC60-205ENST00000546345 SAPCD2Q86UD0 394 aa9.09□□□□□ -0.95
CCDC60-205ENST00000546345 AEBP1Q8IUX7 1158 aa9.09□□□□□ -0.95
CCDC60-205ENST00000546345 PLEKHM2Q8IWE5 1019 aa9.09□□□□□ -0.95
CCDC60-205ENST00000546345 LINC00528Q8N1L1 170 aa9.09□□□□□ -0.95
CCDC60-205ENST00000546345 SERPINA10Q9UK55 444 aa9.09□□□□□ -0.95
CCDC60-205ENST00000546345 CENPFP49454 3210 aa9.09□□□□□ -0.95
CCDC60-205ENST00000546345 TRIOBPQ9H2D6 2365 aa9.08□□□□□ -0.96
CCDC60-205ENST00000546345 LMOD1P29536 600 aaPredicted RBP9.08□□□□□ -0.96
CCDC60-205ENST00000546345 PDE6BP35913 854 aa9.08□□□□□ -0.96
CCDC60-205ENST00000546345 FKBP4Q02790 459 aaKnown RBP eCLIP9.08□□□□□ -0.96
CCDC60-205ENST00000546345 CCDC93Q567U6 631 aa9.08□□□□□ -0.96
CCDC60-205ENST00000546345 CIAPIN1Q6FI81 312 aa9.08□□□□□ -0.96
CCDC60-205ENST00000546345 SLC51AQ86UW1 340 aa9.08□□□□□ -0.96
CCDC60-205ENST00000546345 GPC2Q8N158 579 aa9.08□□□□□ -0.96
CCDC60-205ENST00000546345 PURBQ96QR8 312 aaKnown RBP9.08□□□□□ -0.96
CCDC60-205ENST00000546345 MAFBQ9Y5Q3 323 aaPredicted RBP9.08□□□□□ -0.96
CCDC60-205ENST00000546345 TAF1P21675 1872 aa9.07□□□□□ -0.96
CCDC60-205ENST00000546345 KIAA0100Q14667 2235 aaKnown RBP9.07□□□□□ -0.96
CCDC60-205ENST00000546345 MTHFSP49914 203 aa9.07□□□□□ -0.96
CCDC60-205ENST00000546345 EIF5P55010 431 aaKnown RBP9.07□□□□□ -0.96
CCDC60-205ENST00000546345 SLC39A6Q13433 755 aa9.07□□□□□ -0.96
CCDC60-205ENST00000546345 SOGA3Q5TF21 947 aa9.07□□□□□ -0.96
CCDC60-205ENST00000546345 CNKSR1Q969H4 720 aa9.07□□□□□ -0.96
CCDC60-205ENST00000546345 ZFP42Q96MM3 310 aa9.07□□□□□ -0.96
CCDC60-205ENST00000546345 ZNF395Q9H8N7 513 aaPredicted RBP9.07□□□□□ -0.96
CCDC60-205ENST00000546345 SENP2Q9HC62 589 aa9.07□□□□□ -0.96
CCDC60-205ENST00000546345 CUL9Q8IWT3 2517 aa9.06□□□□□ -0.96
CCDC60-205ENST00000546345 CEP290O15078 2479 aa9.06□□□□□ -0.96
CCDC60-205ENST00000546345 IARSP41252 1262 aaKnown RBP9.06□□□□□ -0.96
CCDC60-205ENST00000546345 EPS15P42566 896 aa9.06□□□□□ -0.96
CCDC60-205ENST00000546345 HABP4Q5JVS0 413 aaKnown RBP9.06□□□□□ -0.96
CCDC60-205ENST00000546345 CNBD1Q8NA66 436 aa9.06□□□□□ -0.96
CCDC60-205ENST00000546345 KDF1Q8NAX2 398 aaPredicted RBP9.06□□□□□ -0.96
CCDC60-205ENST00000546345 MASTLQ96GX5 879 aa9.06□□□□□ -0.96
CCDC60-205ENST00000546345 HHIPL1Q96JK4 782 aa9.06□□□□□ -0.96
CCDC60-205ENST00000546345 LRRC37AA6NMS7 1700 aa9.05□□□□□ -0.96
CCDC60-205ENST00000546345 DDX60Q8IY21 1712 aaKnown RBP9.05□□□□□ -0.96
CCDC60-205ENST00000546345 SPINT1O43278 529 aa9.05□□□□□ -0.96
CCDC60-205ENST00000546345 GNRH1P01148 92 aa9.05□□□□□ -0.96
CCDC60-205ENST00000546345 CANXP27824 592 aaKnown RBP9.05□□□□□ -0.96
CCDC60-205ENST00000546345 NEUROD1Q13562 356 aa9.05□□□□□ -0.96
CCDC60-205ENST00000546345 PLEKHO1Q53GL0 409 aaPredicted RBP9.05□□□□□ -0.96
CCDC60-205ENST00000546345 TRIM50Q86XT4 487 aa9.05□□□□□ -0.96
CCDC60-205ENST00000546345 KIFC2Q96AC6 838 aa9.05□□□□□ -0.96
CCDC60-205ENST00000546345 C1orf115Q9H7X2 142 aa9.05□□□□□ -0.96
CCDC60-205ENST00000546345 SLC52A2Q9HAB3 445 aa9.05□□□□□ -0.96
CCDC60-205ENST00000546345 GMPR2Q9P2T1 348 aaKnown RBP9.05□□□□□ -0.96
CCDC60-205ENST00000546345 PSME4Q14997 1843 aa9.05□□□□□ -0.96
CCDC60-205ENST00000546345 DUOX1Q9NRD9 1551 aa9.04□□□□□ -0.96
CCDC60-205ENST00000546345 A0A1W2PRU2 124 aa9.04□□□□□ -0.96
CCDC60-205ENST00000546345 CAMTA2O94983 1202 aa9.04□□□□□ -0.96
CCDC60-205ENST00000546345 RFX1P22670 979 aa9.04□□□□□ -0.96
CCDC60-205ENST00000546345 FXR1P51114 621 aaKnown RBP eCLIP9.04□□□□□ -0.96
CCDC60-205ENST00000546345 AMOTQ4VCS5 1084 aa9.04□□□□□ -0.96
CCDC60-205ENST00000546345 CCDC82Q8N4S0 544 aa9.04□□□□□ -0.96
CCDC60-205ENST00000546345 ANKRD36CQ5JPF3 1778 aa9.04□□□□□ -0.96
CCDC60-205ENST00000546345 SCN9AQ15858 1988 aa9.03□□□□□ -0.96
CCDC60-205ENST00000546345 FAM155AB1AL88 458 aaPredicted RBP9.03□□□□□ -0.96
CCDC60-205ENST00000546345 CELF2O95319 508 aaKnown RBP9.03□□□□□ -0.96
CCDC60-205ENST00000546345 ATP1A2P50993 1020 aa9.03□□□□□ -0.96
CCDC60-205ENST00000546345 GTF2IP78347 998 aa9.03□□□□□ -0.96
CCDC60-205ENST00000546345 C1orf141Q5JVX7 400 aa9.03□□□□□ -0.96
CCDC60-205ENST00000546345 DIEXFQ68CQ4 756 aaKnown RBP9.03□□□□□ -0.96
CCDC60-205ENST00000546345 INSM2Q96T92 566 aaPredicted RBP9.03□□□□□ -0.96
CCDC60-205ENST00000546345 GLIS2Q9BZE0 524 aaPredicted RBP9.03□□□□□ -0.96
CCDC60-205ENST00000546345 VRTNQ9H8Y1 702 aa9.03□□□□□ -0.96
CCDC60-205ENST00000546345 LGR6Q9HBX8 967 aa9.03□□□□□ -0.96
CCDC60-205ENST00000546345 PCDHGA11Q9Y5H2 935 aa9.03□□□□□ -0.96
CCDC60-205ENST00000546345 RIC1Q4ADV7 1423 aa9.03□□□□□ -0.96
CCDC60-205ENST00000546345 COL6A3P12111 3177 aa9.03□□□□□ -0.96
CCDC60-205ENST00000546345 ZNF646O15015 1829 aaPredicted RBP9.03□□□□□ -0.96
CCDC60-205ENST00000546345 ABCC12Q96J65 1359 aa9.02□□□□□ -0.97
CCDC60-205ENST00000546345 KLRG2A4D1S0 409 aaPredicted RBP9.02□□□□□ -0.97
CCDC60-205ENST00000546345 MEN1O00255 615 aa9.02□□□□□ -0.97
CCDC60-205ENST00000546345 NLRP3Q96P20 1036 aa9.02□□□□□ -0.97
CCDC60-205ENST00000546345 ARHGEF10LQ9HCE6 1279 aa9.02□□□□□ -0.97
CCDC60-205ENST00000546345 ST5P78524 1137 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 NOGQ13253 232 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 CLN3Q13286 438 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 ZNF787Q6DD87 383 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 USP50Q70EL3 339 aaPredicted RBP9.01□□□□□ -0.97
CCDC60-205ENST00000546345 SYNE4Q8N205 404 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 OGFOD1Q8N543 542 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 GCC1Q96CN9 775 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 TRIM47Q96LD4 638 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 PSMD1Q99460 953 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 POLMQ9NP87 494 aaPredicted RBP9.01□□□□□ -0.97
CCDC60-205ENST00000546345 RAB6BQ9NRW1 208 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 SAGE1Q9NXZ1 904 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 GJA3Q9Y6H8 435 aa9.01□□□□□ -0.97
CCDC60-205ENST00000546345 HEG1Q9ULI3 1381 aa9□□□□□ -0.97
CCDC60-205ENST00000546345 TTLL8A6PVC2 850 aa9□□□□□ -0.97
CCDC60-205ENST00000546345 RNMTO43148 476 aaKnown RBP9□□□□□ -0.97
CCDC60-205ENST00000546345 NPR1P16066 1061 aa9□□□□□ -0.97
CCDC60-205ENST00000546345 RASA1P20936 1047 aa9□□□□□ -0.97
CCDC60-205ENST00000546345 CTSOP43234 321 aaPredicted RBP9□□□□□ -0.97
CCDC60-205ENST00000546345 DLK2Q6UY11 383 aa9□□□□□ -0.97
CCDC60-205ENST00000546345 RTKN2Q8IZC4 609 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms