RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 PSMD1Q99460 953 aa23.06■■□□□ 1.28
SKP2-208ENST00000546211 FOXD4L1Q9NU39 408 aa23.06■■□□□ 1.28
SKP2-208ENST00000546211 DIXDC1Q155Q3 683 aa23.05■■□□□ 1.28
SKP2-208ENST00000546211 DALRD3Q5D0E6 543 aaKnown RBP23.05■■□□□ 1.28
SKP2-208ENST00000546211 GIMAP6Q6P9H5 292 aa23.05■■□□□ 1.28
SKP2-208ENST00000546211 RALYLQ86SE5 291 aaKnown RBP23.05■■□□□ 1.28
SKP2-208ENST00000546211 NCOA7Q8NI08 942 aa23.05■■□□□ 1.28
SKP2-208ENST00000546211 ZSCAN31Q96LW9 406 aaPredicted RBP23.05■■□□□ 1.28
SKP2-208ENST00000546211 LAMA4Q16363 1823 aa23.04■■□□□ 1.28
SKP2-208ENST00000546211 PPIP5K2O43314 1243 aa23.04■■□□□ 1.28
SKP2-208ENST00000546211 PTGER2P43116 358 aa23.04■■□□□ 1.28
SKP2-208ENST00000546211 TRDNQ13061 729 aa23.04■■□□□ 1.28
SKP2-208ENST00000546211 TCEANC2Q96MN5 208 aa23.04■■□□□ 1.28
SKP2-208ENST00000546211 CUL4AQ13619 759 aa23.03■■□□□ 1.28
SKP2-208ENST00000546211 COL9A3Q14050 684 aaPredicted RBP23.03■■□□□ 1.28
SKP2-208ENST00000546211 ATP8A2Q9NTI2 1148 aa23.03■■□□□ 1.28
SKP2-208ENST00000546211 PPP4CP60510 307 aa23.02■■□□□ 1.28
SKP2-208ENST00000546211 FGD1P98174 961 aa23.02■■□□□ 1.28
SKP2-208ENST00000546211 TBC1D10CQ8IV04 446 aa23.02■■□□□ 1.28
SKP2-208ENST00000546211 NBPF3Q9H094 633 aa23.02■■□□□ 1.28
SKP2-208ENST00000546211 SH2B1Q9NRF2 756 aaPredicted RBP23.02■■□□□ 1.28
SKP2-208ENST00000546211 CHMP5Q9NZZ3 219 aa23.02■■□□□ 1.28
SKP2-208ENST00000546211 CHD4Q14839 1912 aa23.02■■□□□ 1.28
SKP2-208ENST00000546211 TOB2Q14106 344 aaPredicted RBP23.01■■□□□ 1.27
SKP2-208ENST00000546211 STRIP1Q5VSL9 837 aa23.01■■□□□ 1.27
SKP2-208ENST00000546211 Q6ZUG5 572 aa23.01■■□□□ 1.27
SKP2-208ENST00000546211 FAM163AQ96GL9 167 aaPredicted RBP23.01■■□□□ 1.27
SKP2-208ENST00000546211 LARP6Q9BRS8 491 aaKnown RBP23.01■■□□□ 1.27
SKP2-208ENST00000546211 FKBP1AP62942 108 aaKnown RBP23.01■■□□□ 1.27
SKP2-208ENST00000546211 EXOSC10Q01780 885 aaKnown RBP23.01■■□□□ 1.27
SKP2-208ENST00000546211 CERS5Q8N5B7 392 aa23.01■■□□□ 1.27
SKP2-208ENST00000546211 INTS4Q96HW7 963 aaKnown RBP23.01■■□□□ 1.27
SKP2-208ENST00000546211 VPS33BQ9H267 617 aa23.01■■□□□ 1.27
SKP2-208ENST00000546211 CWC22Q9HCG8 908 aaKnown RBP23.01■■□□□ 1.27
SKP2-208ENST00000546211 CIZ1Q9ULV3 898 aaPredicted RBP23.01■■□□□ 1.27
SKP2-208ENST00000546211 GPR75-ASB3A0A0A6YYF3 556 aa23■■□□□ 1.27
SKP2-208ENST00000546211 PLCG2P16885 1265 aa23■■□□□ 1.27
SKP2-208ENST00000546211 MCM5P33992 734 aa23■■□□□ 1.27
SKP2-208ENST00000546211 BTDP43251 543 aa23■■□□□ 1.27
SKP2-208ENST00000546211 CTDSPL2Q05D32 466 aa23■■□□□ 1.27
SKP2-208ENST00000546211 PPARAQ07869 468 aa23■■□□□ 1.27
SKP2-208ENST00000546211 MB21D2Q8IYB1 491 aaPredicted RBP23■■□□□ 1.27
SKP2-208ENST00000546211 CNNM2Q9H8M5 875 aa23■■□□□ 1.27
SKP2-208ENST00000546211 GAKO14976 1311 aa23■■□□□ 1.27
SKP2-208ENST00000546211 TIAM2Q8IVF5 1701 aa22.99■■□□□ 1.27
SKP2-208ENST00000546211 USP17L3A6NCW0 530 aa22.99■■□□□ 1.27
SKP2-208ENST00000546211 USP17L4A6NCW7 530 aa22.99■■□□□ 1.27
SKP2-208ENST00000546211 DDIT3P35638 169 aa22.99■■□□□ 1.27
SKP2-208ENST00000546211 USP5P45974 858 aa22.99■■□□□ 1.27
SKP2-208ENST00000546211 AKNAD1Q5T1N1 836 aa22.99■■□□□ 1.27
SKP2-208ENST00000546211 USP17L1Q7RTZ2 530 aa22.99■■□□□ 1.27
SKP2-208ENST00000546211 SH3RF3Q8TEJ3 882 aaPredicted RBP22.99■■□□□ 1.27
SKP2-208ENST00000546211 RNF41Q9H4P4 317 aaPredicted RBP22.99■■□□□ 1.27
SKP2-208ENST00000546211 TTF2Q9UNY4 1162 aaKnown RBP22.99■■□□□ 1.27
SKP2-208ENST00000546211 WDR19Q8NEZ3 1342 aa22.99■■□□□ 1.27
SKP2-208ENST00000546211 MYH2Q9UKX2 1941 aa22.99■■□□□ 1.27
SKP2-208ENST00000546211 MINDY4BA8MYZ0 360 aa22.98■■□□□ 1.27
SKP2-208ENST00000546211 F8W031 263 aaPredicted RBP22.98■■□□□ 1.27
SKP2-208ENST00000546211 MFSD6Q6ZSS7 791 aa22.98■■□□□ 1.27
SKP2-208ENST00000546211 STAG1Q8WVM7 1258 aa22.98■■□□□ 1.27
SKP2-208ENST00000546211 MXD3Q9BW11 206 aa22.98■■□□□ 1.27
SKP2-208ENST00000546211 SPON1Q9HCB6 807 aa22.98■■□□□ 1.27
SKP2-208ENST00000546211 DCP1AQ9NPI6 582 aaPredicted RBP22.98■■□□□ 1.27
SKP2-208ENST00000546211 KCNQ5Q9NR82 932 aa22.98■■□□□ 1.27
SKP2-208ENST00000546211 ANAPC4Q9UJX5 808 aa22.98■■□□□ 1.27
SKP2-208ENST00000546211 TPCN1Q9ULQ1 816 aa22.98■■□□□ 1.27
SKP2-208ENST00000546211 PRC1O43663 620 aa22.97■■□□□ 1.27
SKP2-208ENST00000546211 DACT2Q5SW24 774 aa22.97■■□□□ 1.27
SKP2-208ENST00000546211 LARGE2Q8N3Y3 721 aa22.97■■□□□ 1.27
SKP2-208ENST00000546211 BRF1Q92994 677 aa22.97■■□□□ 1.27
SKP2-208ENST00000546211 LRRC2Q9BYS8 371 aa22.97■■□□□ 1.27
SKP2-208ENST00000546211 KRT23Q9C075 422 aa22.97■■□□□ 1.27
SKP2-208ENST00000546211 ARPP21Q9UBL0 812 aaPredicted RBP22.97■■□□□ 1.27
SKP2-208ENST00000546211 ME3Q16798 604 aa22.97■■□□□ 1.27
SKP2-208ENST00000546211 CTR9Q6PD62 1173 aa22.97■■□□□ 1.27
SKP2-208ENST00000546211 AGXT2Q9BYV1 514 aa22.97■■□□□ 1.27
SKP2-208ENST00000546211 ZNF277Q9NRM2 450 aaPredicted RBP22.97■■□□□ 1.27
SKP2-208ENST00000546211 BRCA1P38398 1863 aaKnown RBP22.96■■□□□ 1.27
SKP2-208ENST00000546211 LARGE1O95461 756 aa22.96■■□□□ 1.27
SKP2-208ENST00000546211 CHST3Q7LGC8 479 aa22.96■■□□□ 1.27
SKP2-208ENST00000546211 FBXL16Q8N461 479 aa22.96■■□□□ 1.27
SKP2-208ENST00000546211 DAGLAQ9Y4D2 1042 aa22.96■■□□□ 1.27
SKP2-208ENST00000546211 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.96■■□□□ 1.27
SKP2-208ENST00000546211 NEDD4P46934 1319 aa22.96■■□□□ 1.27
SKP2-208ENST00000546211 B4E1Z4 1266 aa22.95■■□□□ 1.26
SKP2-208ENST00000546211 USP17L12C9JPN9 530 aa22.95■■□□□ 1.26
SKP2-208ENST00000546211 USP17L21D6R901 530 aa22.95■■□□□ 1.26
SKP2-208ENST00000546211 SBK1Q52WX2 424 aa22.95■■□□□ 1.26
SKP2-208ENST00000546211 TEX11Q8IYF3 940 aa22.95■■□□□ 1.26
SKP2-208ENST00000546211 TEKT1Q969V4 418 aa22.95■■□□□ 1.26
SKP2-208ENST00000546211 BCS1LQ9Y276 419 aa22.95■■□□□ 1.26
SKP2-208ENST00000546211 HHIPL2Q6UWX4 724 aa22.94■■□□□ 1.26
SKP2-208ENST00000546211 CCDC83Q8IWF9 413 aa22.94■■□□□ 1.26
SKP2-208ENST00000546211 AMOTL1Q8IY63 956 aa22.94■■□□□ 1.26
SKP2-208ENST00000546211 TGFBRAP1Q8WUH2 860 aa22.94■■□□□ 1.26
SKP2-208ENST00000546211 TOMM22Q9NS69 142 aa22.94■■□□□ 1.26
SKP2-208ENST00000546211 MCM9Q9NXL9 1143 aa22.94■■□□□ 1.26
SKP2-208ENST00000546211 YDJCA8MPS7 323 aa22.93■■□□□ 1.26
SKP2-208ENST00000546211 SLC3A2P08195 630 aaKnown RBP22.93■■□□□ 1.26
SKP2-208ENST00000546211 PCP11498 1178 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms