RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 SAMD7Q7Z3H4 446 aa12.97□□□□□ -0.33
PAAF1-216ENST00000546039 ADGRA1Q86SQ6 560 aa12.97□□□□□ -0.33
PAAF1-216ENST00000546039 TRPM4Q8TD43 1214 aa12.97□□□□□ -0.33
PAAF1-216ENST00000546039 TAF1DQ9H5J8 278 aaPredicted RBP12.97□□□□□ -0.33
PAAF1-216ENST00000546039 MAGEB6P1A0A0J9YX57 407 aa12.96□□□□□ -0.33
PAAF1-216ENST00000546039 POTECB2RU33 542 aa12.96□□□□□ -0.33
PAAF1-216ENST00000546039 WNT10BO00744 389 aa12.96□□□□□ -0.33
PAAF1-216ENST00000546039 MYO1BO43795 1136 aa12.96□□□□□ -0.33
PAAF1-216ENST00000546039 CHMLP26374 656 aa12.96□□□□□ -0.33
PAAF1-216ENST00000546039 PPP4CP60510 307 aa12.96□□□□□ -0.33
PAAF1-216ENST00000546039 NMIQ13287 307 aaPredicted RBP12.96□□□□□ -0.33
PAAF1-216ENST00000546039 APOBEC3HQ6NTF7 200 aaKnown RBP12.96□□□□□ -0.33
PAAF1-216ENST00000546039 CASC1Q6TDU7 716 aa12.96□□□□□ -0.33
PAAF1-216ENST00000546039 PNMA8AQ86V59 439 aaPredicted RBP12.96□□□□□ -0.33
PAAF1-216ENST00000546039 RUFY2Q8WXA3 655 aa12.96□□□□□ -0.33
PAAF1-216ENST00000546039 HELLSQ9NRZ9 838 aa12.96□□□□□ -0.33
PAAF1-216ENST00000546039 AATFQ9NY61 560 aaKnown RBP eCLIP12.96□□□□□ -0.33
PAAF1-216ENST00000546039 A0A0D9SFI3 127 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 MBD4O95243 580 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 EGFRP00533 1210 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 CHGBP05060 677 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 YY1P25490 414 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 SPDYE2Q495Y8 402 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 RBM26Q5T8P6 1007 aaKnown RBP12.95□□□□□ -0.34
PAAF1-216ENST00000546039 MIGA1Q8NAN2 632 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 ZNF526Q8TF50 670 aaPredicted RBP12.95□□□□□ -0.34
PAAF1-216ENST00000546039 OSBP2Q969R2 916 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 AIDAQ96BJ3 306 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 PRMT6Q96LA8 375 aaPredicted RBP12.95□□□□□ -0.34
PAAF1-216ENST00000546039 RIOK1Q9BRS2 568 aaKnown RBP12.95□□□□□ -0.34
PAAF1-216ENST00000546039 RRAGCQ9HB90 399 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 NMRK2Q9NPI5 230 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 TMOD2Q9NZR1 351 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 PCDHAC2Q9Y5I4 1007 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 SIPA1L1O43166 1804 aa12.95□□□□□ -0.34
PAAF1-216ENST00000546039 PITPNM2Q9BZ72 1349 aa12.94□□□□□ -0.34
PAAF1-216ENST00000546039 M0R2C6 588 aa12.94□□□□□ -0.34
PAAF1-216ENST00000546039 MFAP1P55081 439 aaKnown RBP12.94□□□□□ -0.34
PAAF1-216ENST00000546039 RHBDL3P58872 404 aa12.94□□□□□ -0.34
PAAF1-216ENST00000546039 DYNLL1P63167 89 aaKnown RBP12.94□□□□□ -0.34
PAAF1-216ENST00000546039 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
PAAF1-216ENST00000546039 SLFNL1Q499Z3 407 aa12.94□□□□□ -0.34
PAAF1-216ENST00000546039 MCMDC2Q4G0Z9 681 aa12.94□□□□□ -0.34
PAAF1-216ENST00000546039 APOBEC3FQ8IUX4 373 aaKnown RBP12.94□□□□□ -0.34
PAAF1-216ENST00000546039 TEX11Q8IYF3 940 aa12.94□□□□□ -0.34
PAAF1-216ENST00000546039 LCORLQ8N3X6 602 aa12.94□□□□□ -0.34
PAAF1-216ENST00000546039 ZC3H15Q8WU90 426 aaKnown RBP12.94□□□□□ -0.34
PAAF1-216ENST00000546039 FAM227BQ96M60 508 aa12.94□□□□□ -0.34
PAAF1-216ENST00000546039 CRNKL1Q9BZJ0 848 aaKnown RBP12.94□□□□□ -0.34
PAAF1-216ENST00000546039 PUS7LQ9H0K6 701 aaKnown RBP12.94□□□□□ -0.34
PAAF1-216ENST00000546039 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
PAAF1-216ENST00000546039 CCDC171Q6TFL3 1326 aa12.93□□□□□ -0.34
PAAF1-216ENST00000546039 COL2A1P02458 1487 aaPredicted RBP12.93□□□□□ -0.34
PAAF1-216ENST00000546039 GPAA1O43292 621 aa12.93□□□□□ -0.34
PAAF1-216ENST00000546039 GNAT2P19087 354 aa12.93□□□□□ -0.34
PAAF1-216ENST00000546039 HIRAP54198 1017 aaPredicted RBP12.93□□□□□ -0.34
PAAF1-216ENST00000546039 EAPPQ56P03 285 aaPredicted RBP12.93□□□□□ -0.34
PAAF1-216ENST00000546039 FKBP1CQ5VVH2 108 aa12.93□□□□□ -0.34
PAAF1-216ENST00000546039 CDC42EP5Q6NZY7 148 aa12.93□□□□□ -0.34
PAAF1-216ENST00000546039 CWC27Q6UX04 472 aaKnown RBP12.93□□□□□ -0.34
PAAF1-216ENST00000546039 SH3RF3Q8TEJ3 882 aaPredicted RBP12.93□□□□□ -0.34
PAAF1-216ENST00000546039 SEC62Q99442 399 aaKnown RBP12.93□□□□□ -0.34
PAAF1-216ENST00000546039 TDRD3Q9H7E2 651 aaKnown RBP12.93□□□□□ -0.34
PAAF1-216ENST00000546039 ARMT1Q9H993 441 aa12.93□□□□□ -0.34
PAAF1-216ENST00000546039 USP40Q9NVE5 1235 aa12.93□□□□□ -0.34
PAAF1-216ENST00000546039 GGA3Q9NZ52 723 aa12.93□□□□□ -0.34
PAAF1-216ENST00000546039 ZNF70Q9UC06 446 aaPredicted RBP12.93□□□□□ -0.34
PAAF1-216ENST00000546039 RPAP1Q9BWH6 1393 aaPredicted RBP12.93□□□□□ -0.34
PAAF1-216ENST00000546039 ATAD5Q96QE3 1844 aa12.92□□□□□ -0.34
PAAF1-216ENST00000546039 CLRN2A0PK11 232 aa12.92□□□□□ -0.34
PAAF1-216ENST00000546039 NPM3O75607 178 aaKnown RBP12.92□□□□□ -0.34
PAAF1-216ENST00000546039 TNFAIP1Q13829 316 aa12.92□□□□□ -0.34
PAAF1-216ENST00000546039 IDI2Q9BXS1 227 aa12.92□□□□□ -0.34
PAAF1-216ENST00000546039 VEZTQ9HBM0 779 aa12.92□□□□□ -0.34
PAAF1-216ENST00000546039 SGSM2O43147 1006 aa12.91□□□□□ -0.34
PAAF1-216ENST00000546039 WDHD1O75717 1129 aaPredicted RBP12.91□□□□□ -0.34
PAAF1-216ENST00000546039 TNNI2P48788 182 aa12.91□□□□□ -0.34
PAAF1-216ENST00000546039 ANGEL2Q5VTE6 544 aaKnown RBP12.91□□□□□ -0.34
PAAF1-216ENST00000546039 CCDC129Q6ZRS4 1044 aa12.91□□□□□ -0.34
PAAF1-216ENST00000546039 ZNF589Q86UQ0 364 aaPredicted RBP12.91□□□□□ -0.34
PAAF1-216ENST00000546039 LDHDQ86WU2 507 aa12.91□□□□□ -0.34
PAAF1-216ENST00000546039 STRBPQ96SI9 672 aaKnown RBP12.91□□□□□ -0.34
PAAF1-216ENST00000546039 ESYT1Q9BSJ8 1104 aa12.91□□□□□ -0.34
PAAF1-216ENST00000546039 PGAP2Q9UHJ9 254 aa12.91□□□□□ -0.34
PAAF1-216ENST00000546039 ASTN2O75129 1339 aaPredicted RBP12.9□□□□□ -0.34
PAAF1-216ENST00000546039 FLT1P17948 1338 aa12.9□□□□□ -0.34
PAAF1-216ENST00000546039 ENTPD3O75355 529 aa12.9□□□□□ -0.34
PAAF1-216ENST00000546039 USP5P45974 858 aa12.9□□□□□ -0.34
PAAF1-216ENST00000546039 FAM83AQ86UY5 434 aa12.9□□□□□ -0.34
PAAF1-216ENST00000546039 DCPSQ96C86 337 aaKnown RBP12.9□□□□□ -0.34
PAAF1-216ENST00000546039 DDRGK1Q96HY6 314 aa12.9□□□□□ -0.34
PAAF1-216ENST00000546039 ATP8A2Q9NTI2 1148 aa12.9□□□□□ -0.34
PAAF1-216ENST00000546039 PPP2R3BQ9Y5P8 575 aa12.9□□□□□ -0.34
PAAF1-216ENST00000546039 SLC4A4Q9Y6R1 1079 aa12.9□□□□□ -0.34
PAAF1-216ENST00000546039 OTOFQ9HC10 1997 aa12.9□□□□□ -0.34
PAAF1-216ENST00000546039 ZMYM6O95789 1325 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 TCP10L2B9ZVM9 353 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 EIF5BO60841 1220 aaKnown RBP12.89□□□□□ -0.35
PAAF1-216ENST00000546039 CACNB3P54284 484 aa12.89□□□□□ -0.35
PAAF1-216ENST00000546039 NFIAQ12857 509 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms