RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 VWA5B2Q8N398 1253 aa8.26□□□□□ -1.09
LDHC-209ENST00000545848 COL25A1Q9BXS0 654 aaPredicted RBP8.26□□□□□ -1.09
LDHC-209ENST00000545848 CACNA1FO60840 1977 aa8.25□□□□□ -1.09
LDHC-209ENST00000545848 SCN9AQ15858 1988 aa8.25□□□□□ -1.09
LDHC-209ENST00000545848 A0A1W2PRU2 124 aa8.25□□□□□ -1.09
LDHC-209ENST00000545848 FAM177BA6PVY3 158 aa8.25□□□□□ -1.09
LDHC-209ENST00000545848 WDR43Q15061 677 aaKnown RBP eCLIP8.25□□□□□ -1.09
LDHC-209ENST00000545848 RNFT1Q5M7Z0 435 aa8.25□□□□□ -1.09
LDHC-209ENST00000545848 SV2AQ7L0J3 742 aa8.25□□□□□ -1.09
LDHC-209ENST00000545848 NLGN1Q8N2Q7 840 aa8.25□□□□□ -1.09
LDHC-209ENST00000545848 MRS2Q9HD23 443 aa8.25□□□□□ -1.09
LDHC-209ENST00000545848 CHPF2Q9P2E5 772 aa8.25□□□□□ -1.09
LDHC-209ENST00000545848 LAS1LQ9Y4W2 734 aaKnown RBP8.25□□□□□ -1.09
LDHC-209ENST00000545848 CEP350Q5VT06 3117 aa8.25□□□□□ -1.09
LDHC-209ENST00000545848 LOC100996750A0A140TA64 210 aa8.24□□□□□ -1.09
LDHC-209ENST00000545848 ELL2O00472 640 aaPredicted RBP8.24□□□□□ -1.09
LDHC-209ENST00000545848 RHOQP17081 205 aa8.24□□□□□ -1.09
LDHC-209ENST00000545848 EIF2S2P20042 333 aaKnown RBP8.24□□□□□ -1.09
LDHC-209ENST00000545848 GPTP24298 496 aa8.24□□□□□ -1.09
LDHC-209ENST00000545848 GPC1P35052 558 aa8.24□□□□□ -1.09
LDHC-209ENST00000545848 CYP2U1Q7Z449 544 aa8.24□□□□□ -1.09
LDHC-209ENST00000545848 KRTAP4-6Q9BYQ5 205 aa8.24□□□□□ -1.09
LDHC-209ENST00000545848 BCS1LQ9Y276 419 aa8.24□□□□□ -1.09
LDHC-209ENST00000545848 PARP3Q9Y6F1 533 aa8.24□□□□□ -1.09
LDHC-209ENST00000545848 NFKBIEO00221 500 aa8.23□□□□□ -1.09
LDHC-209ENST00000545848 STARD3NLO95772 234 aa8.23□□□□□ -1.09
LDHC-209ENST00000545848 G2E3Q7L622 706 aa8.23□□□□□ -1.09
LDHC-209ENST00000545848 XAGE3Q8WTP9 111 aa8.23□□□□□ -1.09
LDHC-209ENST00000545848 OSBPL3Q9H4L5 887 aa8.23□□□□□ -1.09
LDHC-209ENST00000545848 PHAXQ9H814 394 aaKnown RBP8.23□□□□□ -1.09
LDHC-209ENST00000545848 PRM3Q9NNZ6 103 aa8.23□□□□□ -1.09
LDHC-209ENST00000545848 CEP126Q9P2H0 1117 aa8.23□□□□□ -1.09
LDHC-209ENST00000545848 MAP3K15Q6ZN16 1313 aa8.23□□□□□ -1.09
LDHC-209ENST00000545848 ZNF521Q96K83 1311 aa8.23□□□□□ -1.09
LDHC-209ENST00000545848 TRAK2O60296 914 aa8.22□□□□□ -1.09
LDHC-209ENST00000545848 NTSR2O95665 410 aa8.22□□□□□ -1.09
LDHC-209ENST00000545848 CLN3Q13286 438 aa8.22□□□□□ -1.09
LDHC-209ENST00000545848 SUSD4Q5VX71 490 aa8.22□□□□□ -1.09
LDHC-209ENST00000545848 DUSP27Q5VZP5 1158 aa8.22□□□□□ -1.09
LDHC-209ENST00000545848 WWC1Q8IX03 1113 aa8.22□□□□□ -1.09
LDHC-209ENST00000545848 NLRP3Q96P20 1036 aa8.22□□□□□ -1.09
LDHC-209ENST00000545848 ARHGEF10LQ9HCE6 1279 aa8.22□□□□□ -1.09
LDHC-209ENST00000545848 FANCIQ9NVI1 1328 aa8.22□□□□□ -1.09
LDHC-209ENST00000545848 ADAMTSL1Q8N6G6 1762 aa8.22□□□□□ -1.09
LDHC-209ENST00000545848 RIC1Q4ADV7 1423 aa8.21□□□□□ -1.09
LDHC-209ENST00000545848 AIMP1Q12904 312 aaKnown RBP8.21□□□□□ -1.1
LDHC-209ENST00000545848 C2CD5Q86YS7 1000 aa8.21□□□□□ -1.1
LDHC-209ENST00000545848 ZNF34Q8IZ26 560 aa8.21□□□□□ -1.1
LDHC-209ENST00000545848 FAM9BQ8IZU0 186 aa8.21□□□□□ -1.1
LDHC-209ENST00000545848 ZNF526Q8TF50 670 aaPredicted RBP8.21□□□□□ -1.1
LDHC-209ENST00000545848 JARID2Q92833 1246 aaPredicted RBP8.21□□□□□ -1.1
LDHC-209ENST00000545848 CUEDC1Q9NWM3 386 aaPredicted RBP8.21□□□□□ -1.1
LDHC-209ENST00000545848 PSME4Q14997 1843 aa8.21□□□□□ -1.1
LDHC-209ENST00000545848 WDR90Q96KV7 1748 aa8.2□□□□□ -1.1
LDHC-209ENST00000545848 TGFB2P61812 414 aa8.2□□□□□ -1.1
LDHC-209ENST00000545848 IRF5Q13568 498 aa8.2□□□□□ -1.1
LDHC-209ENST00000545848 COPS6Q7L5N1 327 aa8.2□□□□□ -1.1
LDHC-209ENST00000545848 CCDC85AQ96PX6 553 aaPredicted RBP8.2□□□□□ -1.1
LDHC-209ENST00000545848 NIP7Q9Y221 180 aaKnown RBP eCLIP8.2□□□□□ -1.1
LDHC-209ENST00000545848 ANP32CO43423 234 aa8.19□□□□□ -1.1
LDHC-209ENST00000545848 SRGNP10124 158 aa8.19□□□□□ -1.1
LDHC-209ENST00000545848 CNBD1Q8NA66 436 aa8.19□□□□□ -1.1
LDHC-209ENST00000545848 C7orf43Q8WVR3 580 aa8.19□□□□□ -1.1
LDHC-209ENST00000545848 TEX13AQ9BXU3 409 aaPredicted RBP8.19□□□□□ -1.1
LDHC-209ENST00000545848 RAB6BQ9NRW1 208 aa8.19□□□□□ -1.1
LDHC-209ENST00000545848 IFT57Q9NWB7 429 aa8.19□□□□□ -1.1
LDHC-209ENST00000545848 A0A087WZG4 1122 aa8.18□□□□□ -1.1
LDHC-209ENST00000545848 KLRG2A4D1S0 409 aaPredicted RBP8.18□□□□□ -1.1
LDHC-209ENST00000545848 C21orf2O43822 256 aa8.18□□□□□ -1.1
LDHC-209ENST00000545848 MYCP01106 439 aaPredicted RBP8.18□□□□□ -1.1
LDHC-209ENST00000545848 SLURP2P0DP57 97 aa8.18□□□□□ -1.1
LDHC-209ENST00000545848 PRKCSHP14314 528 aaPredicted RBP8.18□□□□□ -1.1
LDHC-209ENST00000545848 POU4F2Q12837 409 aa8.18□□□□□ -1.1
LDHC-209ENST00000545848 HDGFL1Q5TGJ6 251 aa8.18□□□□□ -1.1
LDHC-209ENST00000545848 PRPF40BQ6NWY9 871 aaKnown RBP8.18□□□□□ -1.1
LDHC-209ENST00000545848 NLRP10Q86W26 655 aa8.18□□□□□ -1.1
LDHC-209ENST00000545848 GRIP2Q9C0E4 1043 aa8.18□□□□□ -1.1
LDHC-209ENST00000545848 NMRK2Q9NPI5 230 aa8.18□□□□□ -1.1
LDHC-209ENST00000545848 WTIPA6NIX2 430 aaPredicted RBP8.17□□□□□ -1.1
LDHC-209ENST00000545848 GNRH1P01148 92 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 HCLS1P14317 486 aaPredicted RBP8.17□□□□□ -1.1
LDHC-209ENST00000545848 LMOD3Q0VAK6 560 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 CRY2Q49AN0 593 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 C9orf131Q5VYM1 1079 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 ZNF385CQ66K41 422 aaPredicted RBP8.17□□□□□ -1.1
LDHC-209ENST00000545848 ARHGAP27Q6ZUM4 889 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 NBPF5PQ86XG9 351 aaPredicted RBP8.17□□□□□ -1.1
LDHC-209ENST00000545848 ZNF837Q96EG3 531 aaPredicted RBP8.17□□□□□ -1.1
LDHC-209ENST00000545848 SETDB2Q96T68 719 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 ISCA1Q9BUE6 129 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 BRIP1Q9BX63 1249 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 GDPD2Q9HCC8 539 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 DDX21Q9NR30 783 aaKnown RBP eCLIP8.17□□□□□ -1.1
LDHC-209ENST00000545848 PIM2Q9P1W9 311 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 DYRK1BQ9Y463 629 aa8.17□□□□□ -1.1
LDHC-209ENST00000545848 IBTKQ9P2D0 1353 aaPredicted RBP8.17□□□□□ -1.1
LDHC-209ENST00000545848 ERVV-1B6SEH8 477 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 IGKV5-2P06315 115 aa8.16□□□□□ -1.1
LDHC-209ENST00000545848 EXOSC9Q06265 439 aaKnown RBP8.16□□□□□ -1.1
LDHC-209ENST00000545848 VAC14Q08AM6 782 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms