RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 BTBD11A6QL63 1104 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 GNAT3A8MTJ3 354 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 RAD17O75943 681 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 TBC1D8O95759 1140 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 ALDH1A1P00352 501 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 SNRPA1P09661 255 aaKnown RBP5.47□□□□□ -1.53
SNHG1-220ENST00000544550 RPS12P25398 132 aaKnown RBP5.47□□□□□ -1.53
SNHG1-220ENST00000544550 SREBF2Q12772 1141 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 SUZ12Q15022 739 aaKnown RBP5.47□□□□□ -1.53
SNHG1-220ENST00000544550 CTC1Q2NKJ3 1217 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 DPP8Q6V1X1 898 aaPredicted RBP5.47□□□□□ -1.53
SNHG1-220ENST00000544550 TBC1D9Q6ZT07 1266 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 GAS2L2Q8NHY3 880 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 ADAM32Q8TC27 787 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 BAP1Q92560 729 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 ZNF592Q92610 1267 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 ARHGAP9Q9BRR9 750 aa5.47□□□□□ -1.53
SNHG1-220ENST00000544550 TFIP11Q9UBB9 837 aaKnown RBP5.47□□□□□ -1.53
SNHG1-220ENST00000544550 ABCC12Q96J65 1359 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 CACNA1SQ13698 1873 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 ERVV-1B6SEH8 477 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 ADM5C9JUS6 153 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 RNF223E7ERA6 249 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 TCERG1O14776 1098 aaKnown RBP5.46□□□□□ -1.54
SNHG1-220ENST00000544550 ST8SIA5O15466 376 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 GDF9O60383 454 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 BBOX1O75936 387 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 HMOX1P09601 288 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 TM4SF4P48230 202 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 TMC4Q7Z404 712 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 ZNF511Q8NB15 262 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 PBXIP1Q96AQ6 731 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 NLRP3Q96P20 1036 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 CEP126Q9P2H0 1117 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 MAFBQ9Y5Q3 323 aaPredicted RBP5.46□□□□□ -1.54
SNHG1-220ENST00000544550 USP16Q9Y5T5 823 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 PDE4DIPQ5VU43 2346 aa5.46□□□□□ -1.54
SNHG1-220ENST00000544550 PRAMEF22A3QJZ6 481 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 PIK3CDO00329 1044 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 ATP9BO43861 1147 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 RFX1P22670 979 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 KIF4BQ2VIQ3 1234 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 TBC1D10BQ4KMP7 808 aaPredicted RBP5.45□□□□□ -1.54
SNHG1-220ENST00000544550 C4orf48Q5BLP8 95 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 KIF6Q6ZMV9 814 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 PPP1R42Q7Z4L9 355 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 ZBTB33Q86T24 672 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 SP8Q8IXZ3 490 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 PHTF2Q8N3S3 785 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 MPNDQ8N594 471 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 IL17REQ8NFR9 667 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 FOXJ1Q92949 421 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 CDCA5Q96FF9 252 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 GGA3Q9NZ52 723 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 TRIM17Q9Y577 477 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 PCDHB9Q9Y5E1 797 aa5.45□□□□□ -1.54
SNHG1-220ENST00000544550 CEMIPQ8WUJ3 1361 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-220ENST00000544550 YDJCA8MPS7 323 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 PSMD14O00487 310 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 DIAPH1O60610 1272 aaKnown RBP5.44□□□□□ -1.54
SNHG1-220ENST00000544550 NF2P35240 595 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 PIP4K2AP48426 406 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-220ENST00000544550 INHBEP58166 350 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 TCIRG1Q13488 830 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 HLFQ16534 295 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 LINC01559Q495D7 138 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 PLA2G2CQ5R387 149 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 OTOP1Q7RTM1 612 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 BPHLQ86WA6 291 aaPredicted RBP5.44□□□□□ -1.54
SNHG1-220ENST00000544550 ARMC5Q96C12 935 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 ERO1AQ96HE7 468 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 POLR3GLQ9BT43 218 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 ABCC4O15439 1325 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 MAP3K15Q6ZN16 1313 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 PITPNM2Q9BZ72 1349 aa5.44□□□□□ -1.54
SNHG1-220ENST00000544550 SHTN1A0MZ66 631 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 AXIN1O15169 862 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 ZBTB24O43167 697 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-220ENST00000544550 AVPP01185 164 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 EN2P19622 333 aaPredicted RBP5.43□□□□□ -1.54
SNHG1-220ENST00000544550 SH3BP2P78314 561 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 ARHGEF6Q15052 776 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 PARP10Q53GL7 1025 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 DLK2Q6UY11 383 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 DDX46Q7L014 1031 aaKnown RBP5.43□□□□□ -1.54
SNHG1-220ENST00000544550 NBPF11Q86T75 865 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 RETREG2Q8NC44 543 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 FAM174AQ8TBP5 190 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 EYA3Q99504 573 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 TRAIPQ9BWF2 469 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 C1QTNF2Q9BXJ5 285 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 PANK3Q9H999 370 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 PTPN22Q9Y2R2 807 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 KNSTRNQ9Y448 316 aa5.43□□□□□ -1.54
SNHG1-220ENST00000544550 PAPPA2Q9BXP8 1791 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 MAGEB6P1A0A0J9YX57 407 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 A0A1W2PPC1 479 aa5.42□□□□□ -1.54
SNHG1-220ENST00000544550 MANSC4A6NHS7 340 aaPredicted RBP5.42□□□□□ -1.54
SNHG1-220ENST00000544550 H0YGN5 161 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms