RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 TRIM28Q13263 835 aaKnown RBP4.39□□□□□ -1.71
BRCA2-206ENST00000544455 SH2B2O14492 632 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-206ENST00000544455 TTF1Q15361 905 aaPredicted RBP4.39□□□□□ -1.71
BRCA2-206ENST00000544455 DPCR1Q3MIW9 517 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 SDF4Q9BRK5 362 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 AGXT2Q9BYV1 514 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 DDX19AQ9NUU7 478 aaKnown RBP4.39□□□□□ -1.71
BRCA2-206ENST00000544455 CTNNA3Q9UI47 895 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 MYSM1Q5VVJ2 828 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 MFSD6Q6ZSS7 791 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF384Q8TF68 577 aa4.39□□□□□ -1.71
BRCA2-206ENST00000544455 PPARAQ07869 468 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 ANKRD18AQ8IVF6 992 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 IGDCC4Q8TDY8 1250 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 TMX1Q9H3N1 280 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 ZSCAN16Q9H4T2 348 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 BCL2L12Q9HB09 334 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 CASP1P29466 404 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 CCDC73Q6ZRK6 1079 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 DHX40Q8IX18 779 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF592Q92610 1267 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 MROH5Q6ZUA9 1318 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 PATL2C9JE40 543 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 VEGFAP15692 232 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 KIF23Q02241 960 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 UQCRFS1P1P0C7P4 283 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 SLURP2P0DP57 97 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 IARSP41252 1262 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 HMGN5P82970 282 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 LINC00301Q8NCQ3 95 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 STAMQ92783 540 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 CFAP45Q9UL16 551 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 ERVV-1B6SEH8 477 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 SPTLC2O15270 562 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 PFKFB1P16118 471 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 FAM84BQ96KN1 310 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 LY9Q9HBG7 655 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 TOGARAM1Q9Y4F4 1720 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 CRYBG1Q9Y4K1 1723 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 SETD1BQ9UPS6 1966 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 UBAP1LF5GYI3 381 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF500O60304 480 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 SHISA4Q96DD7 197 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 FAM217BQ9NTX9 383 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 BECN2A8MW95 431 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 ZFYP08048 801 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 EARS2Q5JPH6 523 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 NAA16Q6N069 864 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 OLFM4Q6UX06 510 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 DYNLL2Q96FJ2 89 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 C16orf45Q96MC5 204 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 CPVLQ9H3G5 476 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 ANGEL1Q9UNK9 670 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 ELP1O95163 1332 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 WNT7AO00755 349 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 PLEKHA8P1O95397 391 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 FBXO18Q8NFZ0 1043 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 MRPS27Q92552 414 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 TRMT1Q9NXH9 659 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 SPATA31A5Q5VU36 1347 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 SPATA31A7Q8IWB4 1347 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 KINO60870 393 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 NBPF5PQ86XG9 351 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 ZNF396Q96N95 335 aaPredicted RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 VPS54Q9P1Q0 977 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 SAP30BPQ9UHR5 308 aaKnown RBP4.38□□□□□ -1.71
BRCA2-206ENST00000544455 MINPP1Q9UNW1 487 aa4.38□□□□□ -1.71
BRCA2-206ENST00000544455 MAGEB6P1A0A0J9YX57 407 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 USP17L12C9JPN9 530 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 USP17L21D6R901 530 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ZBTB43O43298 467 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 GRIK5Q16478 980 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ARHGEF1Q92888 912 aaKnown RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ZBTB9Q96C00 473 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ABCC12Q96J65 1359 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 DIXDC1Q155Q3 683 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ZSCAN25Q6NSZ9 544 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 SHC4Q6S5L8 630 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 CABP5Q9NP86 173 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 RCOR1Q9UKL0 485 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ZMYM6O95789 1325 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 MECOMQ03112 1051 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ANKIB1Q9P2G1 1089 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 COL1A1P02452 1464 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 GOLGA6L19H0YKK7 550 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 UBE3CQ15386 1083 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 NTRK3Q16288 839 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 USP49Q70CQ1 688 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ARFGEF2Q9Y6D5 1785 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 PKD1L3Q7Z443 1732 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 PRR29P0C7W0 189 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 NFIXQ14938 502 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 LRRFIP1Q32MZ4 808 aaKnown RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 LONRF3Q496Y0 759 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 AKNAD1Q5T1N1 836 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 NBPF11Q86T75 865 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 ENGASEQ8NFI3 743 aa4.37□□□□□ -1.71
BRCA2-206ENST00000544455 CCNL1Q9UK58 526 aaPredicted RBP4.37□□□□□ -1.71
BRCA2-206ENST00000544455 KIF3AQ9Y496 699 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms