RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 MYH2Q9UKX2 1941 aa36.17■■■■□ 3.38
CCM2-219ENST00000544363 BAG3O95817 575 aa36.16■■■■□ 3.38
CCM2-219ENST00000544363 TDO2P48775 406 aa36.16■■■■□ 3.38
CCM2-219ENST00000544363 PPP4CP60510 307 aa36.16■■■■□ 3.38
CCM2-219ENST00000544363 HMGB1P09429 215 aaKnown RBP36.16■■■■□ 3.38
CCM2-219ENST00000544363 COL9A3Q14050 684 aaPredicted RBP36.16■■■■□ 3.38
CCM2-219ENST00000544363 NOL10Q9BSC4 688 aaKnown RBP36.16■■■■□ 3.38
CCM2-219ENST00000544363 ZNF277Q9NRM2 450 aaPredicted RBP36.16■■■■□ 3.38
CCM2-219ENST00000544363 SCN9AQ15858 1988 aa36.15■■■■□ 3.38
CCM2-219ENST00000544363 USP17L3A6NCW0 530 aa36.15■■■■□ 3.38
CCM2-219ENST00000544363 USP17L4A6NCW7 530 aa36.15■■■■□ 3.38
CCM2-219ENST00000544363 AK2P54819 239 aa36.15■■■■□ 3.38
CCM2-219ENST00000544363 GIMAP6Q6P9H5 292 aa36.15■■■■□ 3.38
CCM2-219ENST00000544363 USP17L1Q7RTZ2 530 aa36.15■■■■□ 3.38
CCM2-219ENST00000544363 MXD3Q9BW11 206 aa36.15■■■■□ 3.38
CCM2-219ENST00000544363 LAMA4Q16363 1823 aa36.14■■■■□ 3.38
CCM2-219ENST00000544363 DACT2Q5SW24 774 aa36.14■■■■□ 3.38
CCM2-219ENST00000544363 CERS3Q8IU89 383 aa36.14■■■■□ 3.38
CCM2-219ENST00000544363 NLGN2Q8NFZ4 835 aa36.14■■■■□ 3.38
CCM2-219ENST00000544363 BCS1LQ9Y276 419 aa36.14■■■■□ 3.38
CCM2-219ENST00000544363 GAKO14976 1311 aa36.13■■■■□ 3.38
CCM2-219ENST00000544363 LARGE2Q8N3Y3 721 aa36.13■■■■□ 3.37
CCM2-219ENST00000544363 NBPF3Q9H094 633 aa36.13■■■■□ 3.37
CCM2-219ENST00000544363 ALDH8A1Q9H2A2 487 aaPredicted RBP36.13■■■■□ 3.37
CCM2-219ENST00000544363 GPR75-ASB3A0A0A6YYF3 556 aa36.12■■■■□ 3.37
CCM2-219ENST00000544363 SPRYD3Q8NCJ5 442 aa36.12■■■■□ 3.37
CCM2-219ENST00000544363 TTF2Q9UNY4 1162 aaKnown RBP36.12■■■■□ 3.37
CCM2-219ENST00000544363 FER1L6Q2WGJ9 1857 aa36.11■■■■□ 3.37
CCM2-219ENST00000544363 YDJCA8MPS7 323 aa36.11■■■■□ 3.37
CCM2-219ENST00000544363 TMX3Q96JJ7 454 aa36.11■■■■□ 3.37
CCM2-219ENST00000544363 ATP8A2Q9NTI2 1148 aa36.11■■■■□ 3.37
CCM2-219ENST00000544363 ZNF646O15015 1829 aaPredicted RBP36.1■■■■□ 3.37
CCM2-219ENST00000544363 F8W031 263 aaPredicted RBP36.1■■■■□ 3.37
CCM2-219ENST00000544363 BTDP43251 543 aa36.1■■■■□ 3.37
CCM2-219ENST00000544363 NOL8Q76FK4 1167 aaKnown RBP36.1■■■■□ 3.37
CCM2-219ENST00000544363 TAOK3Q9H2K8 898 aa36.1■■■■□ 3.37
CCM2-219ENST00000544363 IARSP41252 1262 aaKnown RBP36.09■■■■□ 3.37
CCM2-219ENST00000544363 DHX32Q7L7V1 743 aaKnown RBP36.09■■■■□ 3.37
CCM2-219ENST00000544363 TBC1D10CQ8IV04 446 aa36.09■■■■□ 3.37
CCM2-219ENST00000544363 SH3RF3Q8TEJ3 882 aaPredicted RBP36.08■■■■□ 3.37
CCM2-219ENST00000544363 HSP90AA1P07900 732 aaKnown RBP36.08■■■■□ 3.37
CCM2-219ENST00000544363 NCOA7Q8NI08 942 aa36.08■■■■□ 3.37
CCM2-219ENST00000544363 TCEANC2Q96MN5 208 aa36.08■■■■□ 3.37
CCM2-219ENST00000544363 DCP1AQ9NPI6 582 aaPredicted RBP36.08■■■■□ 3.37
CCM2-219ENST00000544363 LIMCH1Q9UPQ0 1083 aa36.08■■■■□ 3.37
CCM2-219ENST00000544363 DAGLAQ9Y4D2 1042 aa36.08■■■■□ 3.37
CCM2-219ENST00000544363 PLCG2P16885 1265 aa36.07■■■■□ 3.36
CCM2-219ENST00000544363 ANKRD1Q15327 319 aa36.07■■■■□ 3.36
CCM2-219ENST00000544363 COL4A5P29400 1685 aa36.06■■■■□ 3.36
CCM2-219ENST00000544363 EXOSC10Q01780 885 aaKnown RBP36.06■■■■□ 3.36
CCM2-219ENST00000544363 NFKBIEO00221 500 aa36.05■■■■□ 3.36
CCM2-219ENST00000544363 PPARAQ07869 468 aa36.05■■■■□ 3.36
CCM2-219ENST00000544363 ANAPC4Q9UJX5 808 aa36.05■■■■□ 3.36
CCM2-219ENST00000544363 CTDSPL2Q05D32 466 aa36.05■■■■□ 3.36
CCM2-219ENST00000544363 TRDNQ13061 729 aa36.05■■■■□ 3.36
CCM2-219ENST00000544363 HHIPL2Q6UWX4 724 aa36.05■■■■□ 3.36
CCM2-219ENST00000544363 RALYLQ86SE5 291 aaKnown RBP36.05■■■■□ 3.36
CCM2-219ENST00000544363 NIM1KQ8IY84 436 aa36.05■■■■□ 3.36
CCM2-219ENST00000544363 MRIQ9BWK5 157 aa36.05■■■■□ 3.36
CCM2-219ENST00000544363 SLKQ9H2G2 1235 aaPredicted RBP36.05■■■■□ 3.36
CCM2-219ENST00000544363 TIAM2Q8IVF5 1701 aa36.04■■■■□ 3.36
CCM2-219ENST00000544363 PSME4Q14997 1843 aa36.04■■■■□ 3.36
CCM2-219ENST00000544363 CTR9Q6PD62 1173 aa36.04■■■■□ 3.36
CCM2-219ENST00000544363 MB21D2Q8IYB1 491 aaPredicted RBP36.04■■■■□ 3.36
CCM2-219ENST00000544363 BAZ2AQ9UIF9 1905 aaKnown RBP36.03■■■■□ 3.36
CCM2-219ENST00000544363 ARFGEF1Q9Y6D6 1849 aa36.03■■■■□ 3.36
CCM2-219ENST00000544363 USP5P45974 858 aa36.03■■■■□ 3.36
CCM2-219ENST00000544363 SCNN1DP51172 638 aa36.03■■■■□ 3.36
CCM2-219ENST00000544363 TOB2Q14106 344 aaPredicted RBP36.03■■■■□ 3.36
CCM2-219ENST00000544363 AKNAD1Q5T1N1 836 aa36.03■■■■□ 3.36
CCM2-219ENST00000544363 TEKT1Q969V4 418 aa36.03■■■■□ 3.36
CCM2-219ENST00000544363 MKRN1Q9UHC7 482 aaKnown RBP36.03■■■■□ 3.36
CCM2-219ENST00000544363 ZNRF3Q9ULT6 936 aa36.03■■■■□ 3.36
CCM2-219ENST00000544363 LTBP3Q9NS15 1303 aa36.03■■■■□ 3.36
CCM2-219ENST00000544363 MINDY4BA8MYZ0 360 aa36.02■■■■□ 3.36
CCM2-219ENST00000544363 RHBDL3P58872 404 aa36.02■■■■□ 3.36
CCM2-219ENST00000544363 Q6ZUG5 572 aa36.02■■■■□ 3.36
CCM2-219ENST00000544363 KIAA0825Q8IV33 1275 aa36.02■■■■□ 3.36
CCM2-219ENST00000544363 STAG1Q8WVM7 1258 aa36.02■■■■□ 3.36
CCM2-219ENST00000544363 LARP6Q9BRS8 491 aaKnown RBP36.02■■■■□ 3.36
CCM2-219ENST00000544363 FHDC1Q9C0D6 1143 aaPredicted RBP36.02■■■■□ 3.36
CCM2-219ENST00000544363 USP17L12C9JPN9 530 aa36.01■■■■□ 3.36
CCM2-219ENST00000544363 USP17L21D6R901 530 aa36.01■■■■□ 3.36
CCM2-219ENST00000544363 HDLBPQ00341 1268 aaKnown RBP36.01■■■■□ 3.36
CCM2-219ENST00000544363 CUL4AQ13619 759 aa36.01■■■■□ 3.36
CCM2-219ENST00000544363 ZSCAN31Q96LW9 406 aaPredicted RBP36.01■■■■□ 3.36
CCM2-219ENST00000544363 MCM5P33992 734 aa36.01■■■■□ 3.35
CCM2-219ENST00000544363 SBK1Q52WX2 424 aa36.01■■■■□ 3.35
CCM2-219ENST00000544363 TEX11Q8IYF3 940 aa36.01■■■■□ 3.35
CCM2-219ENST00000544363 ARPP21Q9UBL0 812 aaPredicted RBP36.01■■■■□ 3.35
CCM2-219ENST00000544363 MFSD6Q6ZSS7 791 aa36■■■■□ 3.35
CCM2-219ENST00000544363 TGFBRAP1Q8WUH2 860 aa36■■■■□ 3.35
CCM2-219ENST00000544363 RNF41Q9H4P4 317 aaPredicted RBP36■■■■□ 3.35
CCM2-219ENST00000544363 CNNM2Q9H8M5 875 aa36■■■■□ 3.35
CCM2-219ENST00000544363 FOXD4L1Q9NU39 408 aa36■■■■□ 3.35
CCM2-219ENST00000544363 NEDD4P46934 1319 aa35.99■■■■□ 3.35
CCM2-219ENST00000544363 VIL1P09327 827 aaKnown RBP35.99■■■■□ 3.35
CCM2-219ENST00000544363 CRKP46108 304 aa35.99■■■■□ 3.35
CCM2-219ENST00000544363 TACC3Q9Y6A5 838 aa35.99■■■■□ 3.35
CCM2-219ENST00000544363 GOLGB1Q14789 3259 aaKnown RBP35.99■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms